Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,744,583	IS1 (+) +8 bp	coding (1127‑1134/1374 nt)	mdtK →	multidrug efflux pump MdtK

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 258675	NA (NA)	44 (1.030)	41/492	0.2	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 1744590	0 (0.000)					coding (1134/1374 nt)	mdtK	multidrug efflux pump MdtK
*	?	NC_000913	1744583 =	0 (0.000)	50 (1.180)	49/492	0.1	100%	coding (1127/1374 nt)	mdtK	multidrug efflux pump MdtK
	?	NC_000913	1978503 =	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

ATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258435‑258675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGCGTTGAGCCCTGACCCAGACGATAACCTACGC  <  NC_000913/1744590‑1744349                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGTTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑A                                                                                                                                                                                                                                          <  2:18188/251‑1       GGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCA                                                                                                                                                                                                                                    <  1:268139/251‑1       GGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCC                                                                                                                                                                                                                                     <  1:286386/250‑1        GCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCGGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAA                                                                                                                                                                                                                                   <  2:110288/251‑1               CAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAATCCC‑ACTGCCAATCACCT                                                                                                                                                                                                                             <  1:70665/250‑1                           GGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGGTAGAAACAGAAGCCCCTGGGGCACCTCCAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCAAATCACCTGGATTGAGTC                                                                                                                                                                                                                   >  2:338995/1‑248                            GTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGCGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCCGTAGCTGAACAGGAGGGCCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGGTGGCAGCATCACCCAAAATCCC‑ACTACCAATCACCTGGCTTGAGTCAGA                                                                                                                                                                                                                >  2:83414/1‑250                            GTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAA                                                                                                                                                                                                               <  1:62526/251‑1                                GTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGCCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCT                                                                                                                                                                                                           >  2:24629/1‑251                                  ACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTAAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTG                                                                                                                                                                                                          >  1:379680/1‑250                                                  GTGTAAGTGCACGGCAGTTTCCATGTTTTACGTCAGTGAGACCAGAGATAGCGCTGATTTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGGCAGTAGCTAAACAGAAGGGACTGCTGATAGAAACAGACGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAACCCC‑ACTGCCAATCACCTGGATGGAGTCAGAAAGCTGATATGCCGCCGCCAGCA                                                                                                                                                                                         <  2:17489/251‑1                                                          GAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAA                                                                                                                                                                                 <  2:338028/251‑1                                                            ACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGATGATGTCCGGCGATGCTTTTGCCGATACGCACCACCCCGTCAGTAGCTGAACAGGCGGGACAGCTGCTAGAAACAGAAGCCAATGGAGCACATCAAAAACACCATCATACAATAAATAAGTAAATTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATATGATATACCGCCGCCAGCAACAACAAATG                                                                                                                                                                               >  1:158395/1‑251                                                                       CATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAACCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCG                                                                                                                                                                    <  2:243529/251‑1                                                                                    AGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCCCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGG                                                                                                                                                       >  2:265708/1‑251                                                                                                GATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGCTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑CCTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGAagctcggacg                                                                                                                                            >  2:47674/1‑240                                                                                                GATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGT                                                                                                                                            >  2:142376/1‑250                                                                                                GATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGA                                                                                                                                                      <  1:47674/240‑1                                                                                                      GCTGAGGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATAGACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGGTCAACAG                                                                                                                                     <  2:103400/251‑1                                                                                                       CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGG                                                                                                                                    >  2:283014/1‑251                                                                                                            GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAAAATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGAT                                                                                                                               >  2:90044/1‑251                                                                                                                    GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGCACAGGAGGGACAGCTGATAGCAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCC                                                                                                                       >  2:134442/1‑251                                                                                                                                   CGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑CCTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGAGTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGA                                                                                                        <  2:58144/251‑1                                                                                                                                   CGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCAACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTG                                                                                                         >  1:212866/1‑250                                                                                                                                              GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGGGAAACCGTGACAATGGCCGTC                                                                                             >  2:264479/1‑251                                                                                                                                                CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACATCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCCGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTC                                                                                             >  2:419777/1‑249                                                                                                                                                                GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACA                                                                           <  1:113097/251‑1                                                                                                                                                                 GGACAGCTGATAGAAACAGAAGCCACTGGAGCAACTCAAAAACACAATCCTACAATAACTCAGTAAGTTGGCAGCATCACACAAAATCCC‑ACTGCCAATCAACTGGATTGCGTCCGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACACCCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGCGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACAC                                                                          >  1:187046/1‑251                                                                                                                                                                 GGACAGCTGATAGAAAAAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACAC                                                                          >  2:402350/1‑251                                                                                                                                                                    CAGCTGATAGAATCAGAAGCCACTGGAGCACCTCAACAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCC                                                                        >  2:291194/1‑250                                                                                                                                                                                       CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGC                                                    >  1:252731/1‑251                                                                                                                                                                                        CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCA                                                   <  1:419777/251‑1                                                                                                                                                                                                 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGC                                          <  1:135247/251‑1                                                                                                                                                                                                         AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAG                                  <  1:283014/251‑1                                                                                                                                                                                                          ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACGGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGACTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCTCCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGC                                 <  1:397498/251‑1                                                                                                                                                                                                          ACACCATCATACACTAAATCAGTAAGTTAGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGACGTCAGGGTTGCCATACAGACACCCACCCTAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGC                                 >  2:159971/1‑251                                                                                                                                                                                                           CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGCG                                <  1:24629/251‑1                                                                                                                                                                                                               ATCATACACTAAAGCAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACGGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCTCAGCGGTTTGCGCATCCAGCGTTGA                            <  2:424384/251‑1                                                                                                                                                                                                                        aaatcCAGTAACTTGACAGCATCACCCAAAGTCCCCAC‑GCCAATCACCTGGATGGAGTCAGAAATCGGTCATACCGCCGCCAGCAACATCAAAGGCGCAGCCAGCGTTACAACCCCGGGAGTGTCGTTGTACAACAGGGCGATTGGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACTCCCACCATAAGCCCGGTCCGCGCAGCTGTTTGCTCATCCAGCGTTGAGCCCTGACC                   <  2:349621/246‑1                                                                                                                                                                                                                             CAGTAAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGCGTTGAGCCCTGACCCAGAC              >  1:113006/1‑251                                                                                                                                                                                                                                 AAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCCGGGTTGCCCTACCGCCACCCACCATAAGCCCGGTCCACGCCGCGGCTTGCGCATCCAGCGTTGCGCCCcgcccccgccgct           >  2:31360/1‑237                                                                                                                                                                                                                                 AAGTTGGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGCGTTGAGCCCTGACCCAGACGAT           >  1:344377/1‑250                                                                                                                                                                                                                                      GGCAGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGCGTTGAGCCCTGACCCAGACGctcacct      >  2:39682/1‑243                                                                                                                                                                                                                                         AGCATCACCCAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCTCCGCCAGCAACATCACATGCGCAGCCAGCGTTACAACCTCGGGCTTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGCTTGCGCATCCACCGTTCAGCCCTGACCCAGACGATAACCTACGC  >  2:125229/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258435‑258675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATCCC‑ACTGCCAATCACCTGGATTGAGTCAGAAATCTGATATACCGCCGCCAGCAACATCAAATGCGCAGCCAGCGTTACAACCTCGGGATTGTCGTTGTACAACAGGGCGATTTGCTCCCGCAGTGAAACCGTGAAAATGGCCGTCAGGGTTGCCATACAGACACCCACCATAAGCCCGGTCCGCGCAGCGGTTTGCGCATCCAGCGTTGAGCCCTGACCCAGACGATAACCTACGC  <  NC_000913/1744590‑1744349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.