| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,823,288 | C→T | G161D (GGC→GAC) | recA ← | DNA recombination/repair protein RecA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,823,288 | 0 | C | T | 98.3% | 205.1 / ‑6.6 | 58 | G161D (GGC→GAC) | recA | DNA recombination/repair protein RecA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (30/27); minor base G (0/1); total (30/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
CGCTACCCACCACGTTTTCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGCCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCACGCTGCGCTGCGGCGATCA > NC_000913/2823046‑2823531 | cGCTACCCACCACGTTTTCGCCCTCTTTCACCGCGCCGATACTACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTTGTTTCCGGGTTACCGAACATCACACCATTTTGCAGACGGATCTGGTTGATGAAGATTAGCTGCTGGTTGGACTGCTTCAGGTTGCCGGCCAGCTTACGGATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCg < 1:432239/251‑1 (MQ=255) ccacGTTTTCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGTTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGAtt < 1:412859/251‑1 (MQ=255) gTTTTCGACCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCg > 1:339037/1‑251 (MQ=255) cccTCTTTCCCCGCTCCGATACGACGAATTGCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTATGGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCgg < 2:324252/251‑1 (MQ=255) cgcCGATACGACGTATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCTTTACCCCCGGTATTGGTTTCCGGGTTACCGAACATCACCCCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCTTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTgccgcc < 1:423820/251‑1 (MQ=255) cgcCGATACGACGGAAGTCGAGACGAACAGAGGCGTAGAATCTCAGCGCGCTACCACCGGTAGTGGTTTCCGGGTTGCCGAACATCACCCCAATTTTCATCAGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCAGCATAAGTGCCGCAAGGCCCATGGTAGAGGCGTCGATTTCGCCTCCGGTTTCCGCTTTCGGCGACAGTgccgcc > 2:204510/1‑251 (MQ=255) aTACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACgg > 1:430230/1‑250 (MQ=255) acgGATTTCGGGACGAACAGAGGCGTAGAATTTCACCGCGTTACCACCGGCAGTGGTTTCCGGGTTACCGATCATCACACCAATTTTCATACGGCTCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGATACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCa > 2:123633/1‑250 (MQ=255) aTGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAacgac > 1:151964/1‑251 (MQ=255) gaCGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACg < 1:369983/251‑1 (MQ=255) cGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCACCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTc < 1:35335/251‑1 (MQ=255) aaCAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCt > 1:445652/1‑250 (MQ=255) aCAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTAc < 1:22525/251‑1 (MQ=255) cAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACt < 2:384495/251‑1 (MQ=255) gCGTAGAATTTCAGCGCGTTACCCCCGGTAGTGTTTTCCGGGTTACCGAACATCACACCAATTTGCATCCGGATCGGGTTGATGAAGATCAGCAGCGTGTTGGACGGCTTCAGGGTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGAGAGAGTCGGCGATTTCGCCTTCGATTTCCGCGTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACGGCGcc < 2:404496/251‑1 (MQ=255) aGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGcc > 1:330583/1‑249 (MQ=255) gcgcGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAgg > 1:149037/1‑251 (MQ=255) cgcgTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAggg > 1:414540/1‑251 (MQ=255) tACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGCTAACGTCTACTGCGCCAGAACGCGCCAGGGCGTc > 2:40713/1‑250 (MQ=255) aGTGGTTTCCGGTTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGGTTTCCa < 1:127934/251‑1 (MQ=255) aGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCa < 1:353283/251‑1 (MQ=255) gTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGc > 2:24646/1‑251 (MQ=255) gAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGCCTGCTTCAGGTTACCCGCCAGCTTACGCCTCGCCTGGCTCCTCATACGTGCCGCAAGGCCCATGTGCGAGTCGTCGCTTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGgtgt > 1:225575/1‑251 (MQ=255) aCATCCCACCATTTTCCATACGGATCTGGTTGATGAAGATCAGTGGCTTGTTGGACTGCTTCAGGTTCCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCTCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTcc < 2:87291/251‑1 (MQ=255) aCATCACACCAATTTTCATACGGATCTGGTTGATGAAGAGCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGCGTCGTCGCTTTCGCCTTCGATTTCCGCTTTCGACGTCAGTGCCGCCACGGAGTCAACGACGCTAACGTCTCCTGCGCCAGAACGCGCCCGGGCGTCCCAGATTTCCAGTTCCTGCGCGCCTGTGTcc > 2:308022/1‑251 (MQ=255) cATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCg > 1:341537/1‑251 (MQ=255) tCACACCAATTTTCATACGGATCTGGTTGATGACGATAAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGATTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGAGTCAGTGCCGCCACGGAGTCAAAGACGATAACGGCTACTGCGCCAGAACGCGCCAGGGCGCCACAGATTTCCAGGGCCTGCTCACCGGGGTCCGGc > 2:197544/1‑251 (MQ=255) tcagacgtaTCTGGTGGATGAAGATCAGCGGCGTGTTGGACTGCTTCAGGCTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGcac < 2:12650/240‑1 (MQ=255) tCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCg > 2:192587/1‑251 (MQ=255) gttggatgaAGTTGAGCAGCGGGTGGGCATGCTTCAGTGTCCCCGCCAGGTTACGCATCGCCTGGTGCATCATACGTGCCGCACGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTGCCGCGTTCGGCGTCAGGGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCGCAGATTTCCAGTGGCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTc < 1:177535/243‑1 (MQ=255) ggTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGat < 1:400738/250‑1 (MQ=255) gaggaAGATCAGCAGCGTGTGGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGAGTTCCAGGGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCg < 1:394732/247‑1 (MQ=255) gaAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCATTCGATTTCCGCTTTCGGCGTAAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGACCGGCAGGGCGCACAGCAGGTTGTCGGTCTCGACGc > 2:34896/1‑251 (MQ=255) tcagaggcGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAg < 2:341537/244‑1 (MQ=255) cagcagCGTGTTGGACTGCTACATGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCCGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGACCGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGTTGTCCGGCTGGGCGCACAGCAGGTTGTCCATATCGAcacacagct > 2:49886/1‑243 (MQ=255) cagcGTGTGGGACTGCTGCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGGGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTGCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACGGATTTCCAGTGCCTGCTCGCCTGTGTCCGGCTGGGAGCACAGCGGGTTGGCTATATCGACGCCCAGTTTAc < 2:445652/251‑1 (MQ=255) aCTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGAtt < 1:7051/251‑1 (MQ=255) tGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTc > 2:34142/1‑173 (MQ=255) tGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTc < 1:34142/173‑1 (MQ=255) gCTTCAGGTTCCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTGGATTgg < 1:123633/250‑1 (MQ=255) aGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTcc > 1:397000/1‑249 (MQ=255) aCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCACGTGAGAGTAGTCGCTTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGCGACCGGCTGGGAGCCCAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGcgcgg > 2:89574/1‑250 (MQ=255) gCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCa < 1:428742/251‑1 (MQ=255) ttACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATc > 1:99132/1‑251 (MQ=255) aCGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCg > 1:223874/1‑250 (MQ=255) cATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGCGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATa > 1:452895/1‑250 (MQ=255) gCTCACCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAgg < 2:339037/251‑1 (MQ=255) catcatTCGTGCCGTAAGGCCCATGGGAGAGTCGTCGATTTCGCCTGCGATGTCCGCGTTCGGCGTCAGTGCCGCCACGGAGGCAACGACGATAACGTCTACTTCGCCAGAACGCGCCAGGTCGTCACAGAGTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCTCAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCTATAAACGCGCAGGt < 2:193180/249‑1 (MQ=255) catcatACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTAc > 2:144843/1‑102 (MQ=255) catcatACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTAc < 1:144843/102‑1 (MQ=255) atACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTAcc > 1:23207/1‑251 (MQ=255) tACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCt > 1:168514/1‑251 (MQ=255) gTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCa < 1:338989/251‑1 (MQ=255) gTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCa < 1:192587/251‑1 (MQ=255) gCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATACCGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCCCAGGTTTTAACTTCAcg > 2:314604/1‑251 (MQ=255) ccGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCAcgc > 1:417283/1‑251 (MQ=255) aTGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCACGCTGCGCTgcggc > 1:405291/1‑251 (MQ=255) agagTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCACGCTGCGCTGCGGCGATCa < 1:40713/251‑1 (MQ=255) | CGCTACCCACCACGTTTTCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCAGCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGCCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCACGCTGCGCTGCGGCGATCA > NC_000913/2823046‑2823531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |