| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,586,443 | Δ555 bp | [ydeP]–[ydeQ] | [ydeP], [ydeQ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1586443 | 1586997 | 555 | 15 [0] | [0] 15 | [ydeP]–[ydeQ] | [ydeP],[ydeQ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1586442 | 0 (0.000) | 15 (0.370) | 15/476 | 1.1 | 100% | coding (45/2280 nt) | ydeP | putative oxidoreductase YdeP |
| ? | NC_000913 | 1586998 = | 0 (0.000) | coding (737/915 nt) | ydeQ | putative fimbrial adhesin protein YdeQ | |||||
ACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCATCTACTTATCCTGTGTGGAAATGAATTATTAGGATTTGTAATAGCGATGATGCACAGTACATACAAAGGGATTATCGCCAACATGGATATATAAGAGTAGGGGACTACTCTCTTTCTATTTTTAATCTATTATCGTTAAACAATAGATTAAATACGATAAGTTAAGCATCATCTCTCATAGTGTTTAAA > NC_000913/1586212‑1586674 | aCCGTATTCTAAGCACAGAAAGAGGCGATTACCTGCTTATCCGTGAATTCCCAGGCGATTGCATTTGCGCCGTTTTCACAAATGTAGATTGACGCACTGTGCTTAGGATCTGGCCATGCACAAACCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATACAGGCGTATATCCACCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcgtttgatgc > 2:322700‑M1/1‑231 (MQ=255) agaaagaGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGGCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgtta < 2:349783‑M1/251‑37 (MQ=255) ccctGCTTATTCGTGACTTCCCAGGCGATTGCTTTTGCGTCGTTATCACAAATGTCGAATGACGCACTGTGCTTATGATCTGGCCATTCACACCCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCTATAGCATCCTGGTGTATATCCATCTGCTTACGTACTGCATGCGCTACGGATTTAATAGCACGCactccgcatgcttttgttgcatcaggtgctgtgttagcaaacacttgtc < 1:277476‑M1/249‑50 (MQ=255) cGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtc > 1:105920‑M1/1‑190 (MQ=255) aTTGCTTCTGCGACGTTTTCCCAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATTCACACCCCGGGCAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACGGCGTTCGCTACTGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagtaaacacttgcctgctacgttcagtggtggcacccgaa < 2:294957‑M1/249‑76 (MQ=255) aTGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCGGGCGTATATCCATCTGCGTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttgtgttgcatc < 2:433178‑M1/166‑24 (MQ=255) aTGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGACCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGCTTTAACAGCACCCactcccgatgcttttgttgcatc > 1:433178‑M1/1‑143 (MQ=255) cGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCATGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgtagcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgtacgcttgagcaatata < 1:101622‑M1/251‑113 (MQ=255) tGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtg > 1:136896‑M1/1‑88 (MQ=255) ggCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgc < 1:253629‑M1/251‑185 (MQ=255) gCGTATATCCATCTGCTTACGTACTGCAGTCGCTACGGATTTAACAGCCCCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctgctgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaagaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttggca < 1:367423‑M1/251‑200 (MQ=255) tCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttcccggaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttggcataacaacattg > 2:212572‑M1/1‑41 (MQ=255) ttACGTACTGCATTCGCTACGGATTTAACCGCACCCactcccgatgcttttcttgcatcaggtgctgtgttagcaaacccttgtcgcgtactgtcagtggtggcacccgaacgctaaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttcttcgcttccaggaaagtccgggaaatccacggtgacatttcgactatcaacggtgcagccgcctgttggcatcccaacattgttatt > 2:282540‑M1/1‑36 (MQ=255) tACGTACTGCATTCGCTACGGATTTAACAGCACCCactcccgatgcttttgttgcatcaggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttggcataacaacattgttat < 1:212572‑M1/249‑215 (MQ=255) aCGGATTTAACAGCACCCactcccgatgcttttgttgcatcgggtgctgtgttagcaaacacttgtcggctactgtcagtggtggcacccgaaagataaaatgagagcttttgttcgcttgagcaatatacgccaaggggtatttctgcgcttccaggaaagtccgggagatccacggtgacatttcgactatcaacggtgcagccgcctgttggcataacaacattgttatttgaaataatattccacg < 2:7288‑M1/250‑233 (MQ=255) | ACCGTATTCTCAGCAAAGAAAGAGGCGTTTACCTGCTTATCCGTGACTTCCCAGGCGATTGCTTTTGCGCCGTTTTCACAAATGTCGAATGACGCACTGTGCTTAGGATCTGGCCATGCACAACCCGGACAGTCAAAGCCCTCTGGCTTATTCATGTCAAACATGGCAATAACATCCTGGCGTATATCCATCTGCTTACGTACTGCATTCGCTACGGATTTAACAGCACCCCAACCACCTGCAGCACCCTGGTAGGATTCAATTTTTTTCTTCATCTACTTATCCTGTGTGGAAATGAATTATTAGGATTTGTAATAGCGATGATGCACAGTACATACAAAGGGATTATCGCCAACATGGATATATAAGAGTAGGGGACTACTCTCTTTCTATTTTTAATCTATTATCGTTAAACAATAGATTAAATACGATAAGTTAAGCATCATCTCTCATAGTGTTTAAA > NC_000913/1586212‑1586674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |