New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 696741	20 (0.480)	3 (0.110)	3/330	2.4	12.6%	intergenic (‑1/+15)	metU/glnW	tRNA‑Met/tRNA‑Gln
	?	NC_000913	697135 =	28 (0.980)					intergenic (‑2/+378)	metT/asnB	tRNA‑Met/asparagine synthetase B
Rejected: Frequency below/above cutoff threshold.

CGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAG  >  NC_000913/696495‑696973                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                         cGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGAtt                                                                                                                                                                                                                                      <  1:97127/251‑1 (MQ=255)     acctcAACTGGGTGCAATTTCAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACAGATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGtt                                                                                                                                                                                                                                   <  1:194870/246‑1 (MQ=255)           aCTGGGAGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAAATGGTTATGAATTTGCCGCACATATTCGATACATTCAGAATTTGGAGGCTACGACGGGATTCGAACCTTTGACCCCATCATTATGAGCGCTGTGCTCTAACCAACTGCGCTACGTAGCCCGAATGTTTCTTCg                                                                                                                                                                                                                             >  1:177294/1‑250 (MQ=37)              gggTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATACTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGAt                                                                                                                                                                                                                           <  1:80203/249‑1 (MQ=255)              gggTGCAATTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGCTTAGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATgg                                                                                                                                                                                                                         >  1:97306/1‑251 (MQ=255)                   cACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGAACCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTggg                                                                                                                                                                                                                    <  1:251517/251‑1 (MQ=255)                              gaaGCGGCTTGTATAAATTGGCTGGGGTGCGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGAtt                                                                                                                                                                                                         <  2:59514/250‑1 (MQ=255)                                                      gggTACGAGGATTCGAACCTCGGAATGCCGGCATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAACTTGGATTTGAATTGGCAGATCGTAGTCGACAGCTTCAGAATATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGAGATGTCCTCTAACCAACTGAGATCCGGAGCCAGCTTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGCATGACGGAATCa                                                                                                                                                                                  >  2:343644/1‑250 (MQ=25)                                                                           ggAATGGCTGAATCAGAAACCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAAGTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAAACTGTGACTCCATCATTATTAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGAGTGTGTCTTCGATTGCTGGGGTACCGGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTg                                                                                                                                                            <  1:313953/251‑1 (MQ=38)                                                                                                      ttACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAtcttttttttcgcgataccttatcggcgttgcggggcgcattatgcgtatagagcctttcagcgtcaacctctttttcaaggaaaattgctcgacagtgactgtt                                                                                                                                 >  2:319790‑M1/1‑146 (MQ=255)                                                                                                                     aCCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCGGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCTTGCGGTGAACCGCTTACTCgaag                                                                                                                   <  1:343644/250‑1 (MQ=255)                                                                                                                       cccAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAtcttttttctcccaataccttatcacctgtgcgcggcgcattatacgtatagagccttgccgcgtcaacctctgtttcaagataccttgctcgaaagtggctgtttggttagcttgcgaac                                                                                                                 >  2:336‑M1/1‑129 (MQ=255)                                                                                                                                                          cGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAAACAGGGAATGc                                                                             >  1:224687/1‑251 (MQ=255)                                                                                                                                                                 ttCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTTTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATc                                                                      >  1:351275/1‑251 (MQ=255)                                                                                                                                                                 tacagAAGTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAtcttttttttcg                                                                                                                                                                                                                              <  2:351275‑M1/97‑13 (MQ=255)                                                                                                                                                                                    gacgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGGGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGAACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCg                                                   >  1:290728/1‑251 (MQ=255)                                                                                                                                                                                      ccgacgcttttccgatctccccGTCATTATGAGTGATTGGCACTAACCACCTGATCTCCTTATTCATATTGTTTTTTCGAGTGCTGCGATACCTCGACTCGAACCATTGAAGACCGGTCTCCGAAACCGGCGCCTTTCCGCTTGGCGTGCCCCCAATAACCGGGCGTCGAACCGTTGACTCGAATAAGATGGCTGGGGTACCGGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCt                                                 <  2:397411/233‑1 (MQ=9)                                                                                                                                                                                                aCCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCCAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGACGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAAGCGGGGCCTTCACGCTTGGCGATAcc                                       >  1:317258/1‑251 (MQ=255)                                                                                                                                                                                                        ccccATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTCGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTAGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCt                                                 >  1:397411/1‑233 (MQ=255)                                                                                                                                                                                                             tcatTATGAGTGATGTGCTCTAACCAACTGAGCTGCGGAAGCAGAGTGGTTCTACGATTGCTGTGGTACCTGTATTCAAACTAGGGAGTGCCTGTATCAAAAACCGGTGTCTTACCGCGTGGCGCTCCCCCAATAACCGGGCGGTGAACCGCTTTCTCGAAAAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACaa                           <  1:437353/250‑1 (MQ=21)                                                                                                                                                                                                                     aGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGAGCCTTACCGCTTGGCGATACCCCAACCGAACAACGCTTTCTg                  >  1:285377/1‑251 (MQ=255)                                                                                                                                                                                                                            tgCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGCTTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACAGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGGACCTGGATTCGAACCAGGGAATGCCGGCATAAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGCATg           >  2:269041/1‑251 (MQ=255)                                                                                                                                                                                                                                     cAACTGAGCTCCGTAGGCAGGTTGTGTTTGCGATGGCGGGGGTGCCAGGAGTCGAACCAGGGAATGCCGGTATCAGAAACCTGTGTCTTGCCGCTTGGCGACGCCTCAATAAGCGGGCGGTGAACCGCTGGCTGGGAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTAGCGCGTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAg  <  1:222437/251‑1 (MQ=21)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                         CGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAG  >  NC_000913/696495‑696973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.