New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4093990	1 (0.030)	54 (1.770) +GCATGCGGATCCTCTAGAGTCGACATATG	46/424	0.0	97.6%	coding (283/825 nt)	rhaD	rhamnulose‑1‑phosphate aldolase
	?	NC_000913	4097452 =	2 (0.060)					intergenic (‑4/‑284)	rhaB/rhaS	rhamnulokinase/DNA‑binding transcriptional activator RhaS

TACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACTTTTACGATGCCTAAGTTAGCCGCAGGATCAAGCTGGACGTTACGGAAGAATTTGCCCGAGCCGGTGACAATAAACGGTGTATTTGCCAGTAAAGGCATGGGCTGGCTGAGCGGGATATAGCGCGGTTGTTGGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGA  >  NC_000913/4093748‑4094232                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                   tACCACCAGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGGGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcgg                                                                                                                                                                                                                                            >  1:1711‑M1/1‑243 (MQ=255)    caccaGACACTCGGTGCTGTCTTCCCACAGATGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACCTAGGTGAGGGCGATCAGGTTGGTGGCGCGGAAGTGAATGATCACCAGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGATAGCCCGCTCCGTGGCGGTCGGCccatgcggatc                                                                                                                                                                                                                                         >  1:157349‑M1/1‑240 (MQ=255)        aGACACTCGGTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctct                                                                                                                                                                                                                                     <  1:5424‑M1/251‑16 (MQ=255)               cGGTGCTGTCTTCCCACCGTTGGCGAGTGAAGAAAGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATATTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcg                                                                                                                                                                                                                              >  2:224948‑M1/1‑229 (MQ=255)                 gTGCTGTCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACCTAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcctgcggctcctctagagtcgac                                                                                                                                                                                                                            >  2:237754‑M1/1‑227 (MQ=255)                      gtcttCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatat                                                                                                                                                                                                                        <  1:254536‑M1/248‑29 (MQ=255)                                 gTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgct                                                                                                                                                                                                            >  1:28931‑M1/1‑211 (MQ=255)                                 gTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgct                                                                                                                                                                                                            <  2:228744‑M1/251‑41 (MQ=255)                                 gTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgct                                                                                                                                                                                                            >  1:142452‑M1/1‑211 (MQ=255)                                     gCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaat                                                                                                                                                                                                        <  2:28931‑M1/251‑45 (MQ=255)                                          tGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcat                                                                                                                                                                                                   >  1:133254‑M1/1‑202 (MQ=255)                                           gAAGACCGAGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTTGTGGCGTGGCAGTGCATGGTCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGTATTGAGCCGGAAGTTCGGAAGGGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcatt                                                                                                                                                                                                  <  1:251019‑M1/251‑51 (MQ=255)                                              gACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacg                                                                                                                                                                                               <  1:309786‑M1/251‑54 (MQ=255)                                                 cgcgGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgacc                                                                                                                                                                                            <  1:144449‑M1/251‑57 (MQ=255)                                                     gtgtCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacggccagtc                                                                                                                                                                                        <  1:94248‑M1/251‑61 (MQ=255)                                                       gtCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtct                                                                                                                                                                                       <  2:257671‑M1/250‑62 (MQ=255)                                                       gtCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtct                                                                                                                                                                                       >  1:158983‑M1/1‑189 (MQ=255)                                                         cGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaa                                                                                                                                                                                    <  1:127248‑M1/251‑65 (MQ=255)                                                          gtgttcaaGTACATAGGTGAGGGCGATCAGGGTGGTGGCGTGGCAGTGCATGATCTCCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGGTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggagcctctagagtcgacatatggggatcctgctgaatttcagtacgaccagtctaaa                                                                                                                                                                                    <  1:145191‑M1/247‑65 (MQ=255)                                                           gtttcAAGTACAGAGGGGAGGGCGATCAGGTGGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaa                                                                                                                                                                                  <  2:81799‑M1/250‑67 (MQ=255)                                                                      aTAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGCCGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgactt                                                                                                                                                                       >  2:28415‑M1/1‑174 (MQ=255)                                                                        aGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTGCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcg                                                                                                                                                                     <  1:364736‑M1/251‑80 (MQ=255)                                                                          gTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGAc                                                                                                                                                                                                                                                    >  1:145982/1‑170 (MQ=255)                                                                          gTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGAc                                                                                                                                                                                                                                                    <  2:145982/170‑1 (MQ=255)                                                                          gTGAGGGCGATCAGGTTGGGGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGCAGTGAGCCGGGAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattactcccagtctaaaacgcgcctgaattcgcg                                                                                                                                                                   >  1:144735‑M1/1‑170 (MQ=255)                                                                              gggCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgacct                                                                                                                                                               <  1:275938‑M1/251‑86 (MQ=255)                                                                               ggCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgacctt                                                                                                                                                              >  1:154416‑M1/1‑165 (MQ=255)                                                                                        gTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttact                                                                                                                                                     >  2:42101‑M1/1‑156 (MQ=255)                                                                                                        tGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGAGGGGACGGCTTCGTTGGTTAA‑CCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggcc                                                                                                                                     >  1:220274‑M1/1‑139 (MQ=255)                                                                                                                cACCTGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACTGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgtatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgctaccttctcgttactgacaggaaaatgggccattggcaa                                                                                                                             <  2:239223‑M1/251‑120 (MQ=255)                                                                                                                     gATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgtgccattggcaaccagg                                                                                                                        >  2:65702‑M1/1‑127 (MQ=255)                                                                                                                            gCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagat                                                                                                                 <  1:42101‑M1/251‑132 (MQ=255)                                                                                                                                  ggtggCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgacctgctcgttactgacaggaaaatgggccattggcacccagggaaagattaacgt                                                                                                           <  2:154416‑M1/251‑138 (MQ=255)                                                                                                                                   gtggCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtg                                                                                                          <  1:212693‑M1/251‑139 (MQ=255)                                                                                                                                   gtggCTTTAAGTCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGTCGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCTTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagctcctgaatacgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaatatgaacgt                                                                                                           <  2:292384‑M1/250‑138 (MQ=255)                                                                                                                                         ttAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgat                                                                                                     <  1:195634‑M1/250‑144 (MQ=255)                                                                                                                                            aTGCGCTCGAAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgccaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttc                                                                                                 >  2:344739‑M1/1‑104 (MQ=255)                                                                                                                                                gcTCGCCGTGGGCGAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGAGCCGTCGATGTCGACgcatgcggatcctatagcgtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgccagaaatagcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgtacaaa                                                                                              >  2:344405‑M1/1‑100 (MQ=255)                                                                                                                                                gcTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTTGGGACGGCTTCGGTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacaaccagtctaaaaagcgcctgaattcgcaaccttctcgttactgacaggaaaatgtgccattggcaaccagggcaagatgaacgtgatgatgttcaca                                                                                              >  2:263206‑M1/1‑100 (MQ=255)                                                                                                                                                      cgtGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgctcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgct                                                                                       >  2:311047‑M1/2‑94 (MQ=255)                                                                                                                                                      aGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgct                                                                                       >  1:35486‑M1/1‑94 (MQ=255)                                                                                                                                                                    tGAGCAGGAAGTTCGGAAGTGGGGACGGCATAGTTGGATAACCACCAAAGAATGTGGCAGCCCGCGCAGCCGCTGTCGACgcatgcggatcctctagagtcgaaatatggtgatcctgctgaatttcattacgcacagtctaaaaagagcctgaattcgcgcccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgtacacaatttgctgacttttggtgatg                                                                         >  2:229302‑M1/1‑80 (MQ=255)                                                                                                                                                                     gAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgttcctgcggaatttcattacgaccaggctaaaaagcgcctgaaggcgcgaccttctcgttactgacaggaaaatgtgccattggcaaccagggaaagatgaacgggatgatggtcacaatttgcggaattgtggtgatgt                                                                        <  2:309385‑M1/251‑173 (MQ=255)                                                                                                                                                                         cGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatg                                                                    <  2:158983‑M1/251‑177 (MQ=255)                                                                                                                                                                                   gAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgttatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcat                                                          <  2:133254‑M1/251‑187 (MQ=255)                                                                                                                                                                                     ggtGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaatggtggtgatgtgatgctcaccgcattt                                                        >  2:270883‑M1/2‑63 (MQ=255)                                                                                                                                                                                     aGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcattt                                                        <  2:348682‑M1/251‑189 (MQ=255)                                                                                                                                                                                          ggACGGCTTCGTTGGTTAACCACCAAAGACTGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagcgtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctg                                                    >  2:331612‑M1/1‑58 (MQ=255)                                                                                                                                                                                                  tCGTTGGTTATCCCCCAAATAATGTGGTAGCCCGCGTCGTCGCTGTCGACtcatgcggatccacgagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagctccttaattcgcgaccgtctcgttactgacaggaaaaggggccattggcaaccagggaaagatgaacgtgaggatgttcacaatttgctgaattgtggtgatgttatgctcaccgcattgcctgaaaattc                                             <  2:295436‑M1/249‑200 (MQ=255)                                                                                                                                                                                                           aaCCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagaggcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttccggaaaattcacgctgtatct                                  <  2:155023‑M1/251‑211 (MQ=255)                                                                                                                                                                                                              ccccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttga                               <  1:178353‑M1/251‑214 (MQ=255)                                                                                                                                                                                                               cccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaa                              <  2:314775‑M1/251‑215 (MQ=255)                                                                                                                                                                                                                       aTGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgac                      >  2:217376‑M1/1‑29 (MQ=255)                                                                                                                                                                                                                         ggggtaGCCCGCTCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgcttaatttcattacgaccatgctaaaaagcgcctgaattcgcgaccttctcattactgacaggaaaatgggccattggcaaccagggaaagatgaacgggatgatgttcacaatttgctgaattgtggtgatgtgatgcgcaccgcatgtcctgaaaattcacgctgtatcttgaaaaatcgacg                     <  1:344405‑M1/248‑224 (MQ=255)                                                                                                                                                                                                                            gttgcccGTGCCGTCGCTGTCGACgcatgcggatactctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaagtcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgggatgatgttcacaatttgctgaattgaggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgacgttct                 <  2:222859‑M1/248‑228 (MQ=255)                                                                                                                                                                                                                              aGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgacgtttttt               <  1:33923‑M1/251‑230 (MQ=255)                                                                                                                                                                                                                                cccGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgacgttttttac             <  1:28415‑M1/251‑232 (MQ=255)                                                                                                                                                                                                                                cccGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaagttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaaacgacgttttttac             <  2:232667‑M1/251‑232 (MQ=255)                                                                                                                                                                                                                                  cgcgCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgacgttttttacgt           >  2:275662‑M1/1‑18 (MQ=255)                                                                                                                                                                                                                                  cgcgCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgacgttttttacgt           <  1:311047‑M1/251‑234 (MQ=255)                                                                                                                                                                                                                                   gcgcCGTCGCTGTCGACTTTTACCACGCCTACGTTAGCTGCAGGATCAAGATGGCCGTTACGGCAGACTTTGACGGCGCCGGTGACAATAAACGGTGTATTTGCCAGTAAATGCATAGGCTGGCTGAGCGGGATCTAGCGCGGTTGTGCATGGAAGTTGTCTTTATACGGCGCGATATCGGCGTCATCCAGGCGCAGCGTCAAGATGACGCCGTTGCGTTCGTCCCCGCCTTTCATCCAGGCGTCggtggt          >  2:132091/1‑251 (MQ=255)                                                                                                                                                                                                                                    cgcCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgacgttttttacgtgg         <  1:279467‑M1/251‑236 (MQ=255)                                                                                                                                                                                                                                           gCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgacaggaaaatgggccattggcaaccagggaaagatgaacgtgatgatgttcacaatttgctgaattgtggtgatgtgatgctcaccgcatttcctgaaaattcacgctgtatcttgaaaaatcgacgttttttacgtggttttccg  <  1:234710‑M1/251‑243 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                   TACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGGTGGCTTTAATGCGCTCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACTTTTACGATGCCTAAGTTAGCCGCAGGATCAAGCTGGACGTTACGGAAGAATTTGCCCGAGCCGGTGACAATAAACGGTGTATTTGCCAGTAAAGGCATGGGCTGGCTGAGCGGGATATAGCGCGGTTGTTGGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGA  >  NC_000913/4093748‑4094232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.