New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2521006 | 0 (0.000) | 10 (0.420) | 9/330 | 0.9 | 100% | noncoding (76/76 nt) | valU | tRNA‑Val |
? | NC_000913 | 2521127 = | 0 (0.000) | intergenic (+1/‑46) | valX/valY | tRNA‑Val/tRNA‑Val |
GGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGT > NC_000913/2520775‑2521172 | ggTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatt < 2:102153‑M1/251‑20 (MQ=255) tttCTACCTTACGCATTATTGTTTACGTTGACAAATTGCGCAACACGATCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCACTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATACAGGCATCCCCCACCCctttctcgccagctcaaattc > 2:274758‑M1/1‑230 (MQ=255) aCCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCTCCCACCActttctcgtcagctaaaagtcttg < 1:97951‑M1/249‑25 (MQ=255) tGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgg < 1:155104‑M1/250‑49 (MQ=255) gTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgggtgattagctcagctgggag < 1:301616‑M1/251‑69 (MQ=255) aacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgggtgattagctcagcttggagagcacctcccttacaaggagggggtcggcggttcgatccc < 1:354153‑M1/251‑109 (MQ=255) tttAGAAACTGCGTTGACTCATTTTGACCTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgcccgctcaatgttttgtaaaaatgtgaagtaccgacgtgggtgattagctccgctgggagcgcacctcccctacaaggcgggggacggcggtttgcagccagcgttaac > 2:31335‑M1/1‑134 (MQ=255) gACTCATTCTGAACTCTCCCTATAATGTGTCTCCACCCAGCGTTGTTTATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGTGGTCGGCGGTGCGATCCCGTCATCACCCACCActttctccccagctaaatttcttgtaaaaatgtgaattcccgaagtgggtgattagctcagctgtgagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtc < 1:33936‑M1/250‑132 (MQ=255) ctctCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCCCCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgggtgaatagctcagctgggagcgcacctcccttacaaggagggggtcggcggtttcatccccgcatcacccaccacctccgggcgttcgctcatttgg > 1:58933‑M1/1‑106 (MQ=255) ccacagCGGGGGTGATGAGCTCAGCTGGGTGAGCACCTCTCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgcccgctaaatttcttgtaaaaatgtgaagtcccgaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatc < 2:58933‑M1/250‑167 (MQ=255) | GGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGT > NC_000913/2520775‑2521172 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |