New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 25210060 (0.000)10 (0.420) 9/330 0.9 100% noncoding (76/76 nt) valU tRNA‑Val
?NC_000913 2521127 = 0 (0.000)intergenic (+1/‑46) valX/valY tRNA‑Val/tRNA‑Val

GGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGT  >  NC_000913/2520775‑2521172
                                                                                                                                                                                                                                       |                                                                                                                                                                      
ggTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatt                                                                                                                                                     <  2:102153‑M1/251‑20 (MQ=255)
  tttCTACCTTACGCATTATTGTTTACGTTGACAAATTGCGCAACACGATCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCACTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATACAGGCATCCCCCACCCctttctcgccagctcaaattc                                                                                                                                                   >  2:274758‑M1/1‑230 (MQ=255)
       aCCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCTCCCACCActttctcgtcagctaaaagtcttg                                                                                                                                                <  1:97951‑M1/249‑25 (MQ=255)
                              tGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgg                                                                                                                        <  1:155104‑M1/250‑49 (MQ=255)
                                                 gTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgggtgattagctcagctgggag                                                                                                    <  1:301616‑M1/251‑69 (MQ=255)
                                                                                         aacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgggtgattagctcagcttggagagcacctcccttacaaggagggggtcggcggttcgatccc                                                            <  1:354153‑M1/251‑109 (MQ=255)
                                                                                                  tttAGAAACTGCGTTGACTCATTTTGACCTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgcccgctcaatgttttgtaaaaatgtgaagtaccgacgtgggtgattagctccgctgggagcgcacctcccctacaaggcgggggacggcggtttgcagccagcgttaac                                                   >  2:31335‑M1/1‑134 (MQ=255)
                                                                                                                 gACTCATTCTGAACTCTCCCTATAATGTGTCTCCACCCAGCGTTGTTTATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGTGGTCGGCGGTGCGATCCCGTCATCACCCACCActttctccccagctaaatttcttgtaaaaatgtgaattcccgaagtgggtgattagctcagctgtgagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtc                                     <  1:33936‑M1/250‑132 (MQ=255)
                                                                                                                              ctctCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCCCCActttctcgccagctaaatttcttgtaaaaatgtgaagtaccgaagtgggtgaatagctcagctgggagcgcacctcccttacaaggagggggtcggcggtttcatccccgcatcacccaccacctccgggcgttcgctcatttgg                       >  1:58933‑M1/1‑106 (MQ=255)
                                                                                                                                                   ccacagCGGGGGTGATGAGCTCAGCTGGGTGAGCACCTCTCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActttctcgcccgctaaatttcttgtaaaaatgtgaagtcccgaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatc  <  2:58933‑M1/250‑167 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                      
GGTTTCTACCTTACGCATTATTGTTTTCGTTGACAAATTGCGCAACACGGTCTGTTTTGCGATCATCTTGCTTAAATTTACGACGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGT  >  NC_000913/2520775‑2521172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.