| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,823,288 | C→T | G161D (GGC→GAC) | recA ← | DNA recombination/repair protein RecA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,823,288 | 0 | C | T | 96.4% | 176.5 / NA | 55 | G161D (GGC→GAC) | recA | DNA recombination/repair protein RecA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (24/29); minor base G (0/2); total (24/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
CGCTACCCACCACGTTTTCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGCCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCACGCTGCGCTG > NC_000913/2823046‑2823522 | cGCTACCCACCACGTTTTCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACATAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATCCGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTc < 1:94989/250‑1 (MQ=255) gCTACCCACCACGTTTTCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGc < 1:273369/251‑1 (MQ=255) ccccccccccGTTTTCCCCCTCTTTCACCGCGCCGATTCGACGGATGTCGAGACAAACAGAGGCGTAGACTTTCAGCTCGTTACCTCCGTGAGTGGTTTCCGGGTTACCTAACATCACACCAATTTTCATCCGGATCTGGTTGAGGAAAATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCTGCTGGCTCATCATACGTGCCGCAAGCCCCAGGTGAGAGTCGGCGATTTCGCCt < 2:406886/242‑1 (MQ=255) cacGTTTTCGCCCTCTTCCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTGCGCCTTCGAttt < 2:239700/251‑1 (MQ=255) ctttttCGCCCTCTTTCCCCGCGCCGATTCGACGGATGTCGCGGAGAACTGAGTAGTAAATTTTCAGCGCGTTCCCTCCTGTAGTGGTTTCCGGTTTACCGACCATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTTTTGGCCTGCTGCAGGGTACCCTCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGAttt < 2:215675/247‑1 (MQ=255) tttCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCAGACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGc < 2:136774/250‑1 (MQ=255) gCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACCGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCg > 1:368621/1‑251 (MQ=255) cACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGACGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTg > 1:121013/1‑251 (MQ=255) gATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTGCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACgg < 1:68240/251‑1 (MQ=255) cgacgGCTGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTc > 1:284274/1‑251 (MQ=255) cgacgGATGTCGAGACGAACAGAGGCGTATAATTTCAGCGCGTTACCTCCGGTAGTGGTTTCCGGTTTACCGAACATCACACCAATTTGCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTTTTGGACTGCTTCAGGTTGCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGGCGATTGCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTc < 1:36280/251‑1 (MQ=255) cgGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGAGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCCTACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAac > 1:386353/1‑251 (MQ=255) ggATGTCGAGCCGAACGAAGGCGTAGAATTACAGCGCGTTACCACCGGTAGTGGTTTCCGGGTGACCGAACATCACCCCAATTTTCATACGGATGTGGTTGATGAAGATCA‑GCAGCGTGGTGGACTTCTGCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGGCGATGTGAGAGACGTCGATGTTGCTTTCGATTTTCGCTTTCGGCGTCAGTGCCGCCACGGCGTCAacg < 2:39203/251‑1 (MQ=255) agggcgTTCCCACCGGTAGTGTTTTCCGGGTTACCGAACACCCCACCAATTTTCATACGGATCTGGTTGAAGAAGACCA‑GCGGCGTTTTGGACTGCGTCAGGTTCCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGAGTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACTTCTACTGCGCCAGAACGCGCCAg < 2:89496/248‑1 (MQ=255) aGCGCGTTACCACCGGTAGTGGTTTCCGGTTTACCGAACATCACCCCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAg < 1:145842/251‑1 (MQ=255) cgcgTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAggg > 1:177544/1‑251 (MQ=255) gTTACCCCCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGt < 1:140322/251‑1 (MQ=255) caccGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAg < 1:21396/251‑1 (MQ=255) accGGCAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTcac > 2:242717/1‑248 (MQ=255) tgTGGTTTCCGGTTTACCGACAATCATCCGAATTTTCATACGGATCGGTTTTATGAATA‑CACACAGCGTGTTGGACTGCTTCAGGTTCCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACTCGCCAGGGCGTCACCGAttgcc < 2:230699/249‑4 (MQ=255) gTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTcc > 2:343856/1‑249 (MQ=255) ttCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCt > 1:373969/1‑251 (MQ=255) gggatACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGAATTCCAGTGCCTGCTc > 2:68465/5‑251 (MQ=255) ttCATACGGGTCTGGTTGAGGAAGGTCG‑TCAGCGTGTTGGACTGCTTCAGGTTCCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGGGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGcaca < 2:18436/250‑1 (MQ=255) cATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACTACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAACAcagc < 1:121622/250‑1 (MQ=255) tACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAgg > 1:20003/1‑251 (MQ=255) ggATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTg > 1:262910/1‑251 (MQ=255) ggagctgggggatgaagagatgcagtGTGTTGGTCTGCTTCAGGTTTCCCGCCAGCTTACGCATCGCCTGGCTCATCCTACGGGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCGTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGCCGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTg < 2:285284/230‑1 (MQ=255) tgatgaAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATc < 1:382014/250‑1 (MQ=255) gaAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACg < 1:321687/250‑1 (MQ=255) aGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGCTTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGCTATCGACGccc > 2:307662/1‑251 (MQ=255) agcgtgaaggccTGCTTCAGGTTACCAGCAAGCTTACGACTCGCCTGGCTAATCATACGTGCCGCACGGACCATGTGAGAGACGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGCTAACGTCTACTGCGCCCGAACGCGCCAGGGCGTAACAGACTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGCTCTCGCCGCCCCGTTTACg > 2:61690/12‑251 (MQ=255) cGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCCAGGCCCCTGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCCGTGCCGCCCAGGAGTCAACCACGACAACGGCTACTGCGCCAGAACGCGCCCGGGCGTCACCGCTTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGGTATCGACGCCCCGGTTACGTg > 2:215582/1‑251 (MQ=255) gtTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGt > 2:128075/1‑251 (MQ=255) gtTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGGCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCgg > 1:274944/1‑250 (MQ=255) ggACTGCTGCAGGTGACCCGCCAGCTTACGCAGCGCCTTGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCTTTCTATTTCCGCTTTCGGCGTCAGTGCCTCCACGGAGTCAACGACGATATCTTCTACTGCGCCAGAACGCGCCATGGCGTCACAGTTTTCCAGTTCCTGCTCGCCGGTGTCCGGTTGGTAGCTCAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGa < 1:181975/251‑1 (MQ=255) cAGGTTGCCCGCCAGCTTACGCATCGCCGGGCTCATCATACGTTCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGGCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCa < 2:344829/251‑1 (MQ=255) aGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGAGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTcc > 1:231525/1‑249 (MQ=255) aCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGcgcg < 1:354114/250‑1 (MQ=255) aCCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCgt > 1:130870/1‑251 (MQ=255) gCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCa < 1:61813/251‑1 (MQ=255) aTCGCCTGGCTCATCAAACGTGCCGCAAGGCCCATGTGAGAGTCGTCGCTTTCGCCTTCGATTTCCGCTTTCGGCGTCCGTGCCGCCACGGAGTCAACGACGCTAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATaa > 2:187585/1‑250 (MQ=255) gCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGc > 1:344883/1‑251 (MQ=255) tGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGCTAAACGcac > 2:359166/1‑250 (MQ=255) catcatACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTTCAGCGCGTGTTCAGCATCGATAAACGCACAGGttt < 1:53452/251‑1 (MQ=255) catcatACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGttt < 1:287760/251‑1 (MQ=255) catcatACGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGtt < 1:209627/250‑1 (MQ=255) ccGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGGGCCGCCACGGAGTCAACGACGATAACGGCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTGCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTGTACCtt < 2:368621/250‑1 (MQ=255) aCGTGCCTCAAGGCCCATGTGAGGGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTTCCGCCACGGAGTCAACGACTATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCTGTGCCTGCTCGCCGTTGGCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTGACGTGCGTAGATTGGGTCCGGCGCGTGTTCAGCATCGATAAACGCACAGGCTTTACCt < 2:376759/250‑1 (MQ=255) aCGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTgg > 2:305183/1‑157 (MQ=255) aCGTGCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTgg < 1:305183/157‑1 (MQ=255) gCCGCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCAcg < 1:343856/251‑1 (MQ=255) gCAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCAcgctg > 2:164493/1‑251 (MQ=255) cAAGGCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTAATGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCAcgctgc > 1:206460/1‑251 (MQ=255) gCCCATGTGAGAGTCGTCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCAcgctgcgctg < 1:215582/251‑1 (MQ=255) | CGCTACCCACCACGTTTTCGCCCTCTTTCACCGCGCCGATACGACGGATGTCGAGACGAACAGAGGCGTAGAATTTCAGCGCGTTACCACCGGTAGTGGTTTCCGGGTTACCGAACATCACACCAATTTTCATACGGATCTGGTTGATGAAGATCA‑GCAGCGTGTTGGACTGCTTCAGGTTACCCGCCAGCTTACGCATCGCCTGGCTCATCATACGTGCCGCAAGGCCCATGTGAGAGTCGCCGATTTCGCCTTCGATTTCCGCTTTCGGCGTCAGTGCCGCCACGGAGTCAACGACGATAACGTCTACTGCGCCAGAACGCGCCAGGGCGTCACAGATTTCCAGTGCCTGCTCGCCGGTGTCCGGCTGGGAGCACAGCAGGTTGTCGATATCGACGCCCAGTTTACGTGCGTAGATTGGGTCCAGCGCGTGTTCAGCATCGATAAACGCACAGGTTTTACCTTCACGCTGCGCTG > NC_000913/2823046‑2823522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |