| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 40.0% | 40.8 / 11.7 | 40 | V288G (GTG→GGG) | cusA | copper/silver export system RND permease |
| Reads supporting (aligned to +/- strand): ref base T (0/24); new base G (16/0); total (16/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCC > NC_000913/599332‑599825 | cgaaGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGAt < 2:121234/249‑1 (MQ=255) aaGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATcc < 1:66333/251‑1 (MQ=255) gtGGATGCTGCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAATCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATc < 2:37763/250‑1 (MQ=255) aaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGc < 1:323154/251‑1 (MQ=255) tcgtcgATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGTGCCGGAGATGCGGCGGGGCATTGTCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATcgccg < 1:236353/250‑1 (MQ=255) cggcgatcgaACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCgccgcc < 2:381347/248‑1 (MQ=255) gaACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGGTCCGGG‑AAAAACACCCGCGAAGTGATCGCCGCCGTGAAggg > 1:95768/1‑250 (MQ=255) cggaagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTg < 1:208018/251‑1 (MQ=255) gcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGGGATCCGGC‑AAAAACGCCCGGGGAGGGATCGccgccggggaggggcaaatggaca > 1:219547/1‑232 (MQ=255) ggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGCCCCGGAGATGCGCCGGGGCATTGCCGAACGAAACGGCGAAGGCTAAGTGGCGGGCGGTGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAATGACGAACTGGAAACGc < 2:334453/251‑1 (MQ=255) tatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGATCCGGC‑AAAAACACCCGAGGAGTGATCGCCGCCGTGAAGGGCAAAATGGAAAAGCTGaaa > 1:34728/1‑250 (MQ=255) tGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTTGGATCCGGC‑CAAAACGCCCGCGAAGGGCTCGCCGCCCGGAATGACAAACTGGAAAAGCTGAAAagg > 1:406646/1‑250 (MQ=255) tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGTGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGCGGGGGGGTGATCCCGCGATCCCGC‑CAAAACCCCCGCGGAGGGATCCCCGCCGGGCAGGGAAAAATGGGAACGCTGGAAaggag‑t > 1:205385/1‑251 (MQ=255) cgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGc < 1:38886/251‑1 (MQ=255) cgcCAGCGGATATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGc < 1:137995/251‑1 (MQ=255) ggCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATGCTTTGGTCCGGC‑AAAAACTCCCAGGAAGGGTTTGCCGCCGCGAAGGAGAAACTTGAAACGCTGaaaaacagtactccggaagg > 1:303728/1‑235 (MQ=255) gCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTgg < 1:210314/248‑1 (MQ=255) aaaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGGACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGATTCGGC‑AAAAAAGACCGGGAAGGGATCGCCGCCGTGAAGGACAAAATGGAAACGCTGAAAAGAAG‑GCTCCCGGAAGGCGGGgag > 1:78323/1‑248 (MQ=255) gCTCGACGACTTTAATCACAGCGTTTTAAAAGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCGAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTa < 2:416626/251‑1 (MQ=255) gacgacTTTAATCACATCGTTTTAAAAGCCAGAGAAAATGGCGTCCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGGGGGGGGGGGATCCTACGATTCGGC‑CAAAAAGCACGAGGAGAGGTCGCCGCCGTGAGGGGCAAACTGGAAACGCTGAGAAGAAG‑GATGCCGGAAGGGGGGGAGATCGttcgaa > 1:35378/1‑246 (MQ=255) cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTTGGGTCCGGG‑CAAAACCCCCGGGGAGGGGTCGCCGCCGTGGAGGACAAACTGGAAACGCTGAAAAGAAG‑TCTGCCGGGAGGCgggggggtagtttaaacct > 1:307573/1‑233 (MQ=255) gTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGCTGCGACGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCAGAAATAAACGCCGAAAGCGAAGTGGCGGGGGGGGGGGGGGTCCTACGGACCGGCCAAAAAC‑CCCGACGAGAGATCGGCGCCCTGCAGGGCAAACTGGAAACGCAGAAAAGGAGGTCGCCCGGAAG‑CGGGGAGATAGTTacaaaaatcgctcgccgacaacc > 1:406996/1‑232 (MQ=255) aGCCAGTGAAAATGGCGTGCCCTTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGAGCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGGGGAGATATTTACAACATAC‑GATCGCAGCCAGCTCATTGAcc < 2:21706/251‑1 (MQ=255) aaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGa < 1:130831/251‑1 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGAGCCCGCGATCCGGC‑AAAAACGCCCGAGAAGGGATCGCCGCCGGGGAGGACAAACTGGAAACGCTGAAAAGGAG‑TCTGCCGGGAGGCGGGGGGGTAGTTACAACA‑ACAGATCGCAGCCCGCTCATTGACCGCGCCATCGACAACCTCCGCgggccg > 2:21985/1‑247 (MQ=255) tGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGATATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGAc < 1:374966/143‑1 (MQ=255) tGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCCTCGATCCCGC‑CAAAACGCCCGGGGAGTGATTGCCGCCGGGGAGGACAAACTGGGAACGCTGAAAAGTAG‑TCTGCCGGAAGGGGGGGGGGTAGTTACAACAAAA‑GACCGCCGCCCGCCCCTTGACCGCGCCCTCGGCAACCTCAACGGCCAGTTg > 1:102924/1‑251 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGt < 1:130049/248‑1 (MQ=255) cgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTgg < 1:140689/251‑1 (MQ=255) gCGAAGGGCCAGATTGGCCCGGAGAGGCGCCGGGGCATAGCCGAACTAAACGGCAAAGGCGAAGTGGCGGGCGGGGTGTTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGtt < 2:217509/251‑1 (MQ=255) cAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtggt < 1:259799/251‑1 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGAc < 2:322195/113‑1 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGAc > 1:322195/1‑113 (MQ=255) ggggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGttt < 1:50323/251‑1 (MQ=255) ggggCATTGCAGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTTCGATCCGGC‑CAAAACGCACGGGGAGGGGTCGGCGCCGTGAAGGGCAAACTGGAAACGCTGTAAAGTAG‑TCTGGCGGAAGGCGGGGAGAGAGGTAAAACATAC‑GATCGAAGCCAGACCCTTGACCGCGCCATCGGCAACCTCAACGGCCAGCTGCTGGGAGAGTTTATTGTTGGGGCGGTAGTCGGTGCGCGGttt > 2:331136/1‑251 (MQ=255) cATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGAGAACCTGCGGTCCGGC‑AAAAACGCCCCAGAAGGGATCGCCGCCGTGAGGGGCAAACTGGATACGGTTAAAAGTCG‑TCTGCCGGGAGGGGTGGTGGGAGTTACAACATAA‑GATCGCCGCCAGCTCATTTACCGCGCCATCGGCCACCTCCGCGGCAAGGTGCTAGAGGGGGTTCTTTGGGTGGCGGGAGTCtgtgggcctgttcttt > 1:68962/1‑239 (MQ=255) tAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGGGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGGGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGGAGAGTTTATTGTGGGGGCGGGAGTCTGTGCGCTGTTTCTCTGGCATGTgcgc > 1:267612/1‑251 (MQ=255) aaaCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCt < 2:102924/251‑1 (MQ=255) aagTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGGTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGTTGGCg < 2:380250/251‑1 (MQ=255) ggcgggcgGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGatt < 1:100743/250‑1 (MQ=255) gtggtgATCCTGCGCTCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAGGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGGGCGCTCGGCGCTGGTGGCGATTATTTCg > 1:79517/1‑246 (MQ=255) gtggtgATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAACCTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTTCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGTCATGTGCGCTCGGCGCTGGTGGCGATTATTTCg < 2:79517/246‑1 (MQ=255) gtggtgATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGcc < 1:49062/251‑1 (MQ=255) | AAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGC‑AAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAG‑TCTGCCGGAAGGCGTGGAGATAGTTACAACATAC‑GATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCC > NC_000913/599332‑599825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |