Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,090,238	688 bp→GGGGATCTTGAAGTTCCTATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTTGAAGCT		[yggI]–[endA]	[yggI], [endA]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3090238	3090925	688	51 [0]	[0] 49	[yggI]–[endA]	[yggI],[endA]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3090237	0 (0.000)	32 (1.150) +GGGGATCTTGAAGTTCCTATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTTGAAGCT	30/332	0.1	100%	coding (483/498 nt)	yggI	protein YggI
	?	NC_000913	3090926 =	0 (0.000)					coding (580/708 nt)	endA	DNA‑specific endonuclease I

GCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAACCATCTGAACTATCAGGAACTTTCCTGATCTGGCTGATTGCATACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTT  >  NC_000913/3089995‑3090485                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                         gCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGTAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTCCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGTGCATCAGCTTACCGTACGCCTCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTGCACTGCGTTGAACAGggggatct                                                                                                                                                                                                                                                  <  1:329738‑M1/251‑9 (MQ=255)       ttGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagt                                                                                                                                                                                                                                            >  1:84229‑M1/1‑237 (MQ=255)          cTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcc                                                                                                                                                                                                                                         >  1:376048‑M1/1‑234 (MQ=255)           ggggatggaaaatgtgcggccgcgtagcgccacAGGGCAAAGAGTGGAAGTGGAGGAGGGAAAACGTGCTGGGTGTTCCCGACCGTCGTAGGCATCAGTTCGAACGGAAATCCGTGCGTCGCACCCCCTCCCCCTACCGCTGCAAGCGCCGGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTGCACTGCGGTGAACAGggggatcttgaagttcc                                                                                                                                                                                                                                         <  2:332474‑M1/234‑18 (MQ=255)            ggTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcct                                                                                                                                                                                                                                        >  1:172048‑M1/1‑232 (MQ=255)               aTGGAAACATTTCGGACGCGTAGCGCCACATGGCAAAGAGTGGAAGAGGATGGTGGAAAACGGGCTGGGAGTTCCCGACCGTCGTAAGCATCAGTTCGAACGGCAATCCGTGCGACGCAACACCTTAACCAACCGCTGAAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGCGGCCGTCTATCGCGGTGTTCAATGCGGTGAACAgggggatattgcaggtcctattc                                                                                                                                                                                                                                    >  2:278088/1‑229 (MQ=255)                 ggAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattcc                                                                                                                                                                                                                                   <  1:154692‑M1/250‑24 (MQ=255)                  gAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccg                                                                                                                                                                                                                                  >  2:98664‑M1/1‑226 (MQ=255)                        tttCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcc                                                                                                                                                                                                                           >  1:88138‑M1/1‑220 (MQ=255)                              ccGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattct                                                                                                                                                                                                                     >  2:74529‑M1/1‑214 (MQ=255)                                 cgTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctct                                                                                                                                                                                                                   >  1:294668‑M1/1‑211 (MQ=255)                                   tAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctct                                                                                                                                                                                                                   >  1:17199‑M1/1‑209 (MQ=255)                                             tGGCAAAGAGTGGAAGTGGATGGTGGAAAACGTGCTGGAGGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCACCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTATATCGCGGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggc                                                                                                                                                                                                      >  2:6822‑M1/1‑199 (MQ=255)                                                     agtggaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCCAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGGGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttc                                                                                                                                                                                                 >  2:266624‑M1/1‑191 (MQ=255)                                                       gggaattggatGAGGGAAAACGTGCGGGGTGTTCCCGCCCGTCGTCCGCACCAGTTCGAACTGCAATCCTGGCGTCGCACCACCTTCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCTGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaaggataggaacttcagagc                                                                                                                                                                                            <  2:41735‑M1/250‑63 (MQ=255)                                                               gatgatGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgacgttcctattccgaagttcctattctctagaaagta                                                                                                                                                                                                           >  2:105901‑M1/1‑181 (MQ=255)                                                               gatgatGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagta                                                                                                                                                                                                           <  1:105901‑M1/228‑48 (MQ=255)                                                                            gTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaac                                                                                                                                                                       >  1:131657‑M1/1‑168 (MQ=255)                                                                            gTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaac                                                                                                                                                                       <  2:4653‑M1/251‑84 (MQ=255)                                                                               cTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcc                                                                                                                                                                    >  1:392003‑M1/1‑165 (MQ=255)                                                                                    tgtTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACCGggggatcttgaagttcctattccgcagttcctattctctagaaagtataggaacttcagagcgcttttgagcctctgttcaacgcatgga                                                                                                                                                                >  2:13867‑M1/1‑160 (MQ=255)                                                                                      ttCCCGCCCGTCGTACGCAGCATTTCGAATTGCATCCCGTGCGTCGCACCTCCTTCCCCGACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgtgcaacgcatggcac                                                                                                                                                              <  2:148183‑M1/250‑93 (MQ=255)                                                                                                                gAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttccgagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactggg                                                                                                                                     >  2:216343‑M1/1‑132 (MQ=255)                                                                                                                 aaCTGCAATCCGTGCGTCGCAACACCTCCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagt                                                                                                                                  >  2:408751‑M1/1‑131 (MQ=255)                                                                                                                  ccggcaaTCCGTGCGTCGCACCCCCTCCCCCTACCCCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagcgctgttcaacgcatggaacatgatgtatccggttaccgactgggagtg                                                                                                                                 <  2:413709‑M1/248‑122 (MQ=255)                                                                                                                       aaTCCGTGCGTCGCAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtatag                                                                                                                                                                                                        <  1:1398‑M1/175‑51 (MQ=255)                                                                                                                       aaTCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtatag                                                                                                                                                                                                        >  2:1398‑M1/1‑125 (MQ=255)                                                                                                                             tGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatg                                                                                                                      >  1:414998‑M1/1‑119 (MQ=255)                                                                                                                               cGTCGCACCCCCTCCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagcgctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaa                                                                                                                    <  2:395348‑M1/251‑135 (MQ=255)                                                                                                                               cGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatga                                                                                                                     >  1:145271‑M1/1‑117 (MQ=255)                                                                                                                                              cccTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtg                                                                                                     <  2:51999‑M1/251‑150 (MQ=255)                                                                                                                                               ccTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgc                                                                                                    >  2:96036‑M1/1‑101 (MQ=255)                                                                                                                                                 cacCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcag                                                                                                  <  1:98664‑M1/250‑153 (MQ=255)                                                                                                                                                          aaGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcat                                                                                         <  1:317045‑M1/251‑162 (MQ=255)                                                                                                                                                              tccaGCAGCATCAGCTTACCGTACTCCGCCATAATCTCGTATTTCGTGGCGAGGCCTTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcctgaagtccctattccgaacttcctattctctagaatgtatatgaacctcacagcgcttttgaagctctgttcatctcatggaacaatatgtatccggtttccgcctgggagtgcgagcgcgatgaacgcatcgcgaaggtgtagggcaatcataac                                                                                      <  1:278088‑M1/249‑165 (MQ=255)                                                                                                                                                                                 cGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttg                                                                  <  1:408751‑M1/251‑185 (MQ=255)                                                                                                                                                                                       ccgccATAATCGCGTAGGGCGTGGCGAGGCCGTCTAGCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggc                                                            <  2:392003‑M1/251‑191 (MQ=255)                                                                                                                                                                                           cATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccagtcgcga                                                        <  1:352511‑M1/251‑195 (MQ=255)                                                                                                                                                                                              aaTCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaa                                                      <  1:150046‑M1/250‑197 (MQ=255)                                                                                                                                                                                              aaTCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaa                                                       >  1:271005‑M1/1‑54 (MQ=255)                                                                                                                                                                                              aaTCGCGTAGTGCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcatatcccgtatgtgcaacgcgcttgccaggcgcgaaag                                                     <  1:162173‑M1/251‑198 (MQ=255)                                                                                                                                                                                                tCGCGTCGTCCGTGGCGAGGCCGTCTCTCGCTGTGTTCACTGCGGTGAACAGggggctcttgcagttcctcttccgcagttcctattctctagaacgtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgaatccggttaccgactgggcgtgcgagcgcgatgaccgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcccttgccaggcgcgaaag                                                     >  2:341213‑M1/1‑52 (MQ=255)                                                                                                                                                                                                    gTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagcta                                                >  2:252584‑M1/1‑48 (MQ=255)                                                                                                                                                                                                               cGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagc                                    <  2:172048‑M1/251‑215 (MQ=255)                                                                                                                                                                                                                 aGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgg                                  <  2:376048‑M1/251‑217 (MQ=255)                                                                                                                                                                                                                  ggCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcggg                                 <  2:17199‑M1/251‑218 (MQ=255)                                                                                                                                                                                                                        cTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctt                           >  1:299624‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                                ggtttcacgtcggtgaacaggtggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagtgcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcggtgaacgcgtcgggaaggtgcagggcaatcatagcccgtatgtgcaacgcgcttgctaggcgcgaaggagctaacctacactagcgggattcatgttgtt                     <  2:172611‑M1/239‑230 (MQ=255)                                                                                                                                                                                                                                         gCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcattcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgttaacccctac            <  1:352711‑M1/249‑239 (MQ=255)                                                                                                                                                                                                                                         gCGGTGAACAGggggatcttgaagttcctatgccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgttaacccctac            <  2:296705‑M1/249‑239 (MQ=255)                                                                                                                                                                                                                                                 cAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgttaacccctaccccacgcgta  <  1:18053‑M1/251‑249 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                         GCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAACCATCTGAACTATCAGGAACTTTCCTGATCTGGCTGATTGCATACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTT  >  NC_000913/3089995‑3090485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑