| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,343,194 | 0 | C | T | 78.4% | 62.4 / 15.8 | 38 | D428D (GAC→GAT) | melA | alpha‑galactosidase |
| Reads supporting (aligned to +/- strand): ref base C (2/6); new base T (13/16); total (16/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.89e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACGTCCGTAACGATGGTTTGATTGATAACCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCGATCGGCATTGTGT > NC_000913/4342946‑4343444 | aaCGTCCGTAACGATGGTTTGATTGATAACCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACg > 1:129828/1‑250 (MQ=255) aCGATGGTTTGATTGATACCCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCAGTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGTACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGct < 1:126584/251‑1 (MQ=255) gATGGTTTGATTGATAACCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGctct > 1:402869/1‑251 (MQ=255) ttgatggaTAACCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCTCGATGATGGACCCTCATACTGCCGCCGTGCTGGGCATTGATGAAAGATATGCTCttgttg < 2:281523/250‑1 (MQ=255) aaGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCAc > 1:390505/1‑251 (MQ=255) gTTGCGAGGAAGTATGCTGTCTTGTTGATGATAATGGCATTCAGCGGACCAACGTGGGTACGCAACCTTCGCATCAGGCCGCCCTGATGCAGACCAACATCAACGTACAGCCGCGGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGAGATGGTGGCCCCCCATACTGCCGCCGTGCTGGGCGTTTAGGAAATATATGATCTTGTTAACGACCTGCTTGCCTCCCTCGGCGAc > 2:104732/1‑251 (MQ=255) aaGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGCTGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGcc > 2:31700/1‑250 (MQ=255) gTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTCCGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCAAGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAgg > 2:25698/1‑251 (MQ=255) gTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTg < 1:310227/251‑1 (MQ=255) ggTTGATGCTACTGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATCGCTGACATAAATGCTCTTGTTGACGACCTGATTGCCGCCCCCGGCGACTGGCTGCCAGGCTGGTTGCAcc > 2:259065/1‑251 (MQ=255) ggCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGAc > 1:142839/1‑251 (MQ=255) gCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACt > 1:280386/1‑251 (MQ=255) tACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGAGACTGGCTGCCAAGCTGGTTGCACCGTTAAAACGCGACTAAACGCCACTGCGCCGGGGGAt > 2:223928/1‑251 (MQ=255) ccTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTcc < 1:31700/251‑1 (MQ=255) ccgcaCTGATGCAAACCAACATCAACGTACAGACTCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCTCATACTGCCGCCGTGCTGGGCATGGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGGTGCGCCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTCTTCCGGCGCACACctct < 2:111654/251‑1 (MQ=255) cgccCTGATGCAAACCAACATCAACTTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCTCACACCTCTg < 2:129828/251‑1 (MQ=255) ccgatcggCAAACCAACATCAACGTACAGACGCTGCTGTCCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGAGTAAACGCTACGGCGCCGGGGGATTTATTCCGGCGCACACCTCTGAc < 1:43532/244‑1 (MQ=255) ccTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACg > 1:236004/1‑251 (MQ=255) gCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCACAACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCAGCCGTGCTGGGCATTGATGCAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCAGGCGCACACCTCTgccagatagg > 2:43532/1‑242 (MQ=255) aTCAACGTACAGACGCTGCTGACCGAAGCCATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGGCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAg < 1:145972/251‑1 (MQ=255) ccGTACAGGCGCTGCGTACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGAGGATGGACCCGCATACGGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAggcgg < 2:390505/250‑1 (MQ=255) cGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAggcggg < 1:160154/251‑1 (MQ=255) gCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCGGACGATACCAAGAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATa < 1:210260/251‑1 (MQ=255) ttactgataaTCGCGACCGTGTTTCCCACGCCGCGATGATGGACTCGCATACCGCCGCCGTGCTGGTCATTGATGAAATATATGCTCTTGTGGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGTATTTATTCCGGCGCACTCCTCTGACGATACCTATACCAGAAGGCGGGCGTTGGTAACATCGTCCCGATACCCTAt < 2:199936/242‑1 (MQ=255) cGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGc < 1:223928/251‑1 (MQ=255) gAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATaa > 1:227399/1‑206 (MQ=255) gAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACGGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATaa < 2:227399/206‑1 (MQ=255) gtgtTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGCCTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTAc > 1:248481/1‑250 (MQ=255) cgccgcGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTCAGtt < 1:377257/251‑1 (MQ=255) cgcgATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACt < 2:72244/134‑1 (MQ=255) cgcgATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACt > 1:72244/1‑134 (MQ=255) gatgGACCCGCATACTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCATGGCGGCTGTCTGTCAGTGTTGTTGCGCGGTTAAAACGCGATGAAACGCGTCGGCGCCTGGTGAGTTATTCCGGCGCACACCTCTGACGAGACCAATAACAGAAGGGGTGCGTTGGTAACAGCGGCCCGGGACCGTATGAGCATATCAATGACTACAAAACTCAGTTATGGAttt < 1:404848/250‑1 (MQ=255) ggcccagCATACTGCCGGCGTTCTGGGCATTGACGAAATATAGGCTCGTGTTGACGACCTGATTGCCGCCCACGGCGTCTGGCTGCCAGGCTGGTTGCAACGGTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCCTTGGTAACAGCGACCCTATACCCTATGAGCATTTCAATGCCTACAAAACTCAGTTATGGATTTGGaa < 2:122936/245‑2 (MQ=255) aCTGCCGCCGTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGaa < 1:259065/251‑1 (MQ=255) ccgccgTGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCAGTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGAt < 2:280386/251‑1 (MQ=255) tGCTGGGCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCg > 1:248661/1‑251 (MQ=255) cggggCATTGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCGAt < 2:143665/249‑1 (MQ=255) ggCATGGATGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCGATCgg < 2:402869/251‑1 (MQ=255) cGAAATATATGCTCTTGTTTACGATCTGATTGCCGCCCTCGGCGACTGGCTGCCAGGCTGGTTGCATCGTCAAAACGCGACTAAACGCGTCTGCGCCTGGTGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCTGGCGTTGGTAACAGCGACCCGATTCCCTATGAGCATTTCAATGACTACAAATCTCATTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCGTTCGGCAgtgtgt < 2:92612/251‑1 (MQ=255) | AACGTCCGTAACGATGGTTTGATTGATAACCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAAAACGCGACTAAACGCTACTGCGCCGGGGGATTTATTCCGGCGCACACCTCTGACGATACCAATAACAGAAGGCGGGCGTTGGTAACAGCGACCCGATACCCTATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCGATCGGCATTGTGT > NC_000913/4342946‑4343444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |