Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,090,238	688 bp→GGGGATCTTGAAGTTCCTATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTTGAAGCT		[yggI]–[endA]	[yggI], [endA]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3090238	3090925	688	58 [0]	[0] 56	[yggI]–[endA]	[yggI],[endA]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3090237	0 (0.000)	36 (1.420) +GGGGATCTTGAAGTTCCTATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTTGAAGCT	30/334	0.1	100%	coding (483/498 nt)	yggI	protein YggI
	?	NC_000913	3090926 =	0 (0.000)					coding (580/708 nt)	endA	DNA‑specific endonuclease I

TGGAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACC  >  NC_000913/3090690‑3091172                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       tgtgttcccgcccgtcgtacgcatcagttcgaactgcaatccgtgcgtcgcaacaccttcccctaccgctgcaagagccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATgg                                                                                                                                                                                                                                          >  2:109854‑M2/237‑251 (MQ=255)           cccgtcgtacgcatcagttcgaactgcaatccgtgcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatagcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaaggtcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGt                                                                                                                                                                                                                                >  1:61345‑M2/227‑251 (MQ=255)                 gtacgcatcagttcgaactgcaatccgtgcgtcgcaactccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgctgtgaacagggggatcttgaaggtcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCgg                                                                                                                                                                                                                          <  1:359424‑M2/31‑1 (MQ=255)                  tacgcatcagttcgaactgcaatccgtgcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGt                                                                                                                                                                                                                         >  1:396488‑M2/220‑251 (MQ=255)                        tcagttcgaactgcaatccgtgcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCg                                                                                                                                                                                                                    >  1:286994‑M2/214‑250 (MQ=255)                            ttcgaactgcaatccttccgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACt                                                                                                                                                                                                                 <  2:85418‑M2/40‑1 (MQ=255)                            ttcgaactgcaatccgtgcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACt                                                                                                                                                                                                                 >  1:85418‑M2/210‑249 (MQ=255)                               gaactgcaatccgtgcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTggg                                                                                                                                                                                                              >  1:300491‑M2/207‑249 (MQ=255)                                    gcaatccgtgcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGa                                                                                                                                                                                                       <  1:246332‑M2/50‑1 (MQ=255)                                       atccgtgcgtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAgcg                                                                                                                                                                                                    >  1:240946‑M2/199‑251 (MQ=255)                                       atccgtgcgtcgcaacaccttaccctaccgctgcaagtgccaggagcctcagcttaccgtacgccgccataatcgcgtcgttcgtggcgaggcagtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagcgcgcttttgaagctCTGTTCACCGCATGGAACAAGATGTATCCGGTTCCCGACTGGGAGTGCGAgcg                                                                                                                                                                                                    >  2:189113‑M2/199‑251 (MQ=255)                                              cgtcgcaacaccttcccccaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGa                                                                                                                                                                                              >  1:5613‑M2/192‑250 (MQ=255)                                               gtcgcaacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcatggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAAc                                                                                                                                                                                            <  1:267658‑M2/61‑1 (MQ=255)                                                    aacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATc                                                                                                                                                                                       >  1:68132‑M2/186‑251 (MQ=255)                                                    aacaccttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATc                                                                                                                                                                                       <  1:300619‑M2/66‑1 (MQ=255)                                                       accttcccctaccgctgcaagtgccaggagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATcgcg                                                                                                                                                                                    >  1:187090‑M2/183‑251 (MQ=255)                                                                                  gggcaatatgtttccgtgcgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacaggggtatcttgaagttcctattccgaagttcctatgctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACCAGATGTATCCGGTTGCTGACTGGGAGTGTTAGCGCGATGAACGCATCGCGAAGGTGCAGTGCAATCTTTAcccggat                                                                                                                                                         <  2:251954‑M2/96‑4 (MQ=255)                                                                                  gagcatcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTAt                                                                                                                                                         <  1:232285‑M2/96‑1 (MQ=255)                                                                                      atcagcttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGc                                                                                                                                                     >  1:182223‑M2/152‑251 (MQ=255)                                                                                        cagcttcccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCaa                                                                                                                                                   <  1:235631‑M2/102‑1 (MQ=255)                                                                                            ttaccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAAcgcg                                                                                                                                               >  1:250865‑M2/146‑251 (MQ=255)                                                                                             taccgtacgacgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAAcgcg                                                                                                                                               <  2:9197‑M2/106‑1 (MQ=255)                                                                                               ccgtacgccgccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCtt                                                                                                                                            >  1:284047‑M2/143‑251 (MQ=255)                                                                                               ccgtacgccgccataataacgtagttcgaggcgaggccgtatatcgctgtattcactgcgctgaccagggggatcttgaagttcccattccgaagtacctattctctagaaagtatagcaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAAATGTATCCGGTTACCGACTGGGCGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCACCGCGCtt                                                                                                                                            >  2:193807‑M2/143‑251 (MQ=255)                                                                                                        gccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGgcgc                                                                                                                                   >  1:120433‑M2/134‑251 (MQ=255)                                                                                                         ccataatcgcgtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGcgcg                                                                                                                                  <  1:45311‑M2/119‑1 (MQ=255)                                                                                                                   gtagttcgtggcgaggccgtctatcgctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTaa                                                                                                                        <  1:196993‑M2/129‑1 (MQ=255)                                                                                                                   gtagttcgtggcgaggccgtctatcgctgggttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTGCAACGCATGGAACAAGATGTATCCGGTTTCCGACTGGGAGTGCTGGCGCGATGAACGCAGCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACTCGCTTGCCAGGCGCGAAAGAGCTaa                                                                                                                        <  2:206712‑M2/129‑1 (MQ=255)                                                                                                                      gtgcggggcgaggccgtctatcgcggtgttaactgcggtgaacagggggagcttgaagttcctaggccgaagttccgattctctagaaaggagaggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTCACGACGGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAAACCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCt                                                                                                                     <  2:197080‑M2/132‑1 (MQ=255)                                                                                                                          gtggcgaggccgtctatcgctgtgttcactgccgggaccagggggatcttgaagttcctattccgaagttcctattctctcgaacgtataggaccttcagcgcgcttttgaagctCTGTTCAACGCATGGAACAAGCTGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGCATGTGCAACGCGCTTGCCAGGCGCGACCGAGCTCACCTccac                                                                                                                 >  2:396700‑M2/116‑251 (MQ=255)                                                                                                                                 ggccgtctatagctgtgttcactgcagtgaacagggggatcttgaagttcctattccgaagttcctcttctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCggg                                                                                                          >  2:277340‑M2/109‑251 (MQ=255)                                                                                                                                        tatcgctgtgttcactgcggtacacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCTCTTGCCAGGCGCGAAAGAGCTAACCTTCACTAGCGGGATTCtt                                                                                                    <  2:317362‑M2/149‑1 (MQ=255)                                                                                                                                             ctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCa                                                                                                                                                                                                                                                  >  2:89786‑M2/97‑103 (MQ=255)                                                                                                                                             ctgtgttcactgcggtgaacagggggatcttgaagttcctattccgaagttcctagtctctagaaagtataggaactgcagagcgcttttgaagcgCTGTTCa                                                                                                                                                                                                                                                  <  1:89786‑M2/7‑1 (MQ=255)                                                                                                                                                     actgcggtgaacagggggatcttgaagttcctatgccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTACAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTaaccccaa                                                                                      <  2:289013‑M2/163‑3 (MQ=255)                                                                                                                                                                aagggggatcttgaagttcctatgccgaagttcctattctctagaaagtataggtacttcagatcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGATCGCGATGAACGCATCGCGAAGGTGCAGTGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTACCCCATACCCCTCGCGTa                                                                           <  2:347373‑M2/174‑1 (MQ=255)                                                                                                                                                                           tgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTgg                                                                >  1:354077‑M2/67‑251 (MQ=255)                                                                                                                                                                               gttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAATATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGgag                                                            <  1:349116‑M2/189‑1 (MQ=255)                                                                                                                                                                                  cctagtccgaaattcctattctcaagaaagtataagaacttcagagcgcgtttgaagttCTTGTCATCGCATGGAACAAGATGTATCCGGTGACCGTCTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCATGCGCGAAAGAGCTAACCTGCGCTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgac                                                          <  2:158479‑M2/191‑1 (MQ=255)                                                                                                                                                                                     attccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacgac                                                       <  1:342887‑M2/194‑1 (MQ=255)                                                                                                                                                                                         cgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCACTCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGTATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacgac                                                       >  2:162103‑M2/53‑246 (MQ=255)                                                                                                                                                                                         cgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTGTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacgac                                                       <  1:162103‑M2/194‑1 (MQ=255)                                                                                                                                                                                             gttcctattctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGAtttt                                              <  1:322429‑M2/203‑1 (MQ=255)                                                                                                                                                                                                     tctctagaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTAAACTAt                                       <  1:109854‑M2/210‑1 (MQ=255)                                                                                                                                                                                                           gaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                           <  1:218850‑M2/206‑1 (MQ=255)                                                                                                                                                                                                           gaaagtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGAAGACGCGGATTTTTaa                                           >  2:218850‑M2/35‑240 (MQ=255)                                                                                                                                                                                                              agtataggaacttcagagcgctttggaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAAGCATAACCCGTATGGGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCGACACTATCGGGATTCGTTTGGTTGAGCCCTACCCCACTCGTACAACCGCGTGGGGAGGCGACGCGGAGTTTTAACGATTCGTATcccc                             <  2:396488‑M2/220‑1 (MQ=255)                                                                                                                                                                                                               gtataggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGAGGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTGTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGTGAGACGACGCGGATTTTTAACTATGCGTAGccccc                            <  1:177101‑M2/221‑1 (MQ=255)                                                                                                                                                                                                                    ggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTa                                                                                      >  2:271802‑M2/26‑188 (MQ=255)                                                                                                                                                                                                                    ggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTa                                                                                      <  1:271802‑M2/163‑1 (MQ=255)                                                                                                                                                                                                                    ggaacttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCAtt                       <  1:295843‑M2/226‑1 (MQ=255)                                                                                                                                                                                                                    ggaaattcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGCTGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAAAGCATCGCGACGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGCGACGCCGCGGATTTTTAACTATGCGGATCCCCCGCAtt                       >  2:121846‑M2/26‑251 (MQ=255)                                                                                                                                                                                                                         ttcagagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatc                   >  1:133065‑M2/21‑250 (MQ=255)                                                                                                                                                                                                                            agagcgcttttgaagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATcc               <  1:189113‑M2/234‑1 (MQ=255)                                                                                                                                                                                                                                   ttttgcagctCTGTTCAACGCATGGAACAAGATGTATCCGGTTAACGACTAGGTGTGCGAGCGCGCTGAACGCATCGCGCAGGCGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAAAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACACCTACCCCACGCGTACAACCGCGGGGGGCGACGACGCGGATTTTTAACTATGAGTATCCCCCGCATTTATCATCCTGAaccc        >  1:238915‑M2/11‑250 (MQ=255)                                                                                                                                                                                                                                         agctCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGAcc  <  1:130255‑M2/247‑1 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       TGGAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACC  >  NC_000913/3090690‑3091172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑