New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4322811 =28 (0.770)44 (1.280) 38/452 0.1 62.3% intergenic (‑389/+525) phnF/phnD putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein
?NC_000913 = 4322802 27 (0.790)intergenic (‑380/+534) phnF/phnD putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein

CTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGTGAC‑GGCCATTTCGGTGAGGTAAT  >  NC_000913/4322553‑4323040
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               
cTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCACCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGCGAGCACGCCGGTGGTGTGGATAAACAgc                                                                                                                                                                                                                                                >  1:303370/1‑251 (MQ=255)
               cGCCGATCCCGCCCGCGCCGACAATGCCGAAGAAGGTCGCCGAGCGGACGTTGCATTCGAAGAGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGACACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcg                                                                                                                                                                                                                                 <  2:274168‑M2/251‑17 (MQ=255)
                    aTCCCGCCCGCGCCGACCATGCCGACGACGGTCGCCGAGCGGCCGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGAAGCACGCCGTAGAGGATCTCTTCGCGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGGGTGGATAAATAGcgccagcacgccagcgaacgg                                                                                                                                                                                                                            <  1:41465‑M2/251‑22 (MQ=255)
                      cccgcccgCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTGGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCGCGCCGTAGAGGATCTCTTCGAGCTTGTTGGCGCCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGGCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtc                                                                                                                                                                                                                          >  1:249988‑M2/1‑228 (MQ=255)
                          cccgcgccgaCCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGACGCGTTAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGAGGATAAATAGcgccagcaagccagcgaacggtccg                                                                                                                                                                                                                        <  1:145086‑M2/246‑26 (MQ=255)
                          ccTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCAGCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAAGCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAAc                                                                                                                                                                                                                      <  1:304003/251‑1 (MQ=255)
                             gcgcCGACCATGCCGACGACGGGCGCCGAGCGGCCGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGTCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGATCACGCCGGTGGGGTGTATAAATAGcgccagcacgccagcgaacggtccgagacc                                                                                                                                                                                                                   >  1:274168‑M2/1‑221 (MQ=255)
                                 cGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGCTAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAACTAGcgccagcacgccagcgcacggtccgcgaccgacg                                                                                                                                                                                                               <  2:186143‑M2/251‑35 (MQ=255)
                                    ccATGCCGACGACGGTCGCCGAGCGGCCGTTGGATTCGAAGCGCTAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCAAGGTTCACTTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgcgaccgacggcg                                                                                                                                                                                                            <  2:272414‑M2/251‑38 (MQ=255)
                                      aTGCCGACGACGGTCGCCGAGCGGACGTTGGCTTCGAAGCGATAGCGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGATTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagcccgacggcgac                                                                                                                                                                                                          <  1:212203‑M2/251‑40 (MQ=255)
                                              gacgGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaaca                                                                                                                                                                                                  >  1:89429‑M2/1‑204 (MQ=255)
                                               acgGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaac                                                                                                                                                                                                   <  1:219439‑M2/249‑47 (MQ=255)
                                                 ggTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagca                                                                                                                                                                                               >  2:73808‑M2/1‑201 (MQ=255)
                                                    cGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCTCCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccatcacgccagcgaacggtccgagtccgacggcgaccacgaacagcatgg                                                                                                                                                                                            >  2:384726‑M2/1‑198 (MQ=255)
                                                     gCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCGGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGTCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggttcgagaccgacggcgaccacgaacagcatggc                                                                                                                                                                                           >  1:160572‑M2/1‑197 (MQ=255)
                                                      ccGAGCGGTCGTTGGATTCGAAGCGATAGAGTGTGTAGAAGATCAGCAGCGGCATCACCTGCGGCAGCCCGCTGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGATTGCCGTCCCCCGGGCCAGGTTCAATTGCTTCGACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatgg                                                                                                                                                                                            >  2:6220‑M2/1‑196 (MQ=255)
                                                           cGGACGTTGGATTCGAAGCGATAGGGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagac                                                                                                                                                                                     <  1:88808‑M2/251‑61 (MQ=255)
                                                                   ggATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGACGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGAGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGCCGGCGACCACGAACAGCAAGGCGCAGAc                                                                                                                                                                             >  2:269211/1‑251 (MQ=255)
                                                                   ggATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcg                                                                                                                                                                              >  1:70481‑M2/1‑183 (MQ=255)
                                                                       tCGAAGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaa                                                                                                                                                                          >  1:62732‑M2/1‑179 (MQ=255)
                                                                          aaGCGATAGAGGGAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgccggcgaccacgaacagcatggcgaagaccatttcgttaatggc                                                                                                                                                                      <  1:214104‑M2/251‑76 (MQ=255)
                                                                                 agggggAGTAGTAGATCAGCAGCGGCTTCACCGGCGGCAGCACGCCGTAGATGATCTCGTCGAGCTTGTTGGCACCGGTGGAGTGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCGTGGAGAGCACGCCGGTGGGGTGGATAAATAGCGCCAGC‑‑‑‑‑‑‑C‑CGCCAGCGAACGGTCCGAGACCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAg                                                                                                                                                       <  2:303352/248‑1 (MQ=255)
                                                                                 agagGGAGTAGGCGATCAGCAGCGACCTCACCTGCGGCAGCACGCCGTACAGGCTCTCTTCGAGCTCGATGGCAACGGTGACGCGAATGCCTTCCACCGGGCCAGGCTCAATTGCTTCTACCACTTCGGAAA‑GCAACTTGGAGAACACGCCGGGGGAGTGGATAA‑‑‑‑‑‑‑CAAC‑CGCCAGCACCCCAGCGAACGGTCCGCGACGGGAGGCGCCCACGAACAGCATGGCGAAGACCATTTCGTTAATGGGGCggg                                                                                                                                                         >  2:197127/1‑248 (MQ=255)
                                                                                     ggAGTAGGAGATCAGCAGCGGCATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgt                                                                                                                                                           >  1:357125‑M2/1‑165 (MQ=255)
                                                                                          aGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAgg                                                                                                                                                      <  1:43176/251‑1 (MQ=255)
                                                                                           ggAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGCACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGc                                                                                                                                                     >  1:270993/1‑251 (MQ=255)
                                                                                           ggAGATCAGCAGCGGCATCACCTGCGGCAGCACGCAGTAGAGGCTCTCTTCGACCTAGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgaccgcgaccacgcacagcatggcgacgaccatttagttaatggcgcggcaggcgtccatc                                                                                                                                                      <  1:242751‑M2/250‑92 (MQ=255)
                                                                                                     agcggcatCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccctccggcggcgaac                                                                                                                                           <  1:6535‑M2/248‑103 (MQ=255)
                                                                                                     agcggcatCACCTGCGGCAGCACGCAGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCCGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATCAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtacctcgggaggcgaac                                                                                                                                           <  2:30404‑M2/248‑103 (MQ=255)
                                                                                                        ggCATCACCTGCGTCAGCACGCCGTAGAGGGTCTCTTCGTGCTTGGTGGCACCGGTGGCGCGAATGCCTTCCGCCGGGCCTGGCTCAAGCGCTTCCACCGCTTCGGAAA‑GCATCTGCGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGGCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCACGGGGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAggcg                                                                                                                                         <  1:374844/250‑1 (MQ=255)
                                                                                                          cATCACCTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggct                                                                                                                                      >  1:192773‑M2/1‑144 (MQ=255)
                                                                                                            tCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGACCGGGCCGCGGCCGCCGGCGGCCACGAACAGCAAGGCGAAGACCATTTCGTTACTGTCGCGGCAGGCGTcagtcgggcggagc                                                                                                                                     >  2:240443/1‑237 (MQ=255)
                                                                                                               ccTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgcccacgaacagcatggcgaagaccatttcgttaatgg                                                                                                                                                                       <  2:334733‑M2/213‑75 (MQ=255)
                                                                                                               ccTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaa                                                                                                                                 >  1:155711‑M2/1‑139 (MQ=255)
                                                                                                               ccTGCGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatgg                                                                                                                                                                       >  1:334733‑M2/1‑139 (MQ=255)
                                                                                                                       agcaCGCCGTAGATGATCGCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTaa                                                                                                                         <  1:2634/251‑1 (MQ=255)
                                                                                                                         caCGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacg                                                                                                                       >  1:272414‑M2/1‑129 (MQ=255)
                                                                                                                                 agagGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACg                                                                                                               >  1:352940/1‑251 (MQ=255)
                                                                                                                                 agagGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCGTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCcaccac                                                                                                                <  1:165351/250‑1 (MQ=255)
                                                                                                                                 agagGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccagg                                                                                                               <  1:254399‑M2/251‑131 (MQ=255)
                                                                                                                                       tctcTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcg                                                                                                         <  1:200970‑M2/251‑137 (MQ=255)
                                                                                                                                        ctctTCGAGCTTGTTGGCACCGGTGGCGCGAATGACTTCCACCGGGCCGGCCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGACCAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCATCCATCAGGCGGCGAACGGGCTGGTAAACCAACCACggaccc                                                                                                          >  1:133676/1‑245 (MQ=255)
                                                                                                                                        cgcgtcgagcgtgtgggagccggtggcgcggatgccttccACCGGGCCAGGGTCAATGGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGATCACGCCGGTGGTGTGGATAAATAGcgccagcacggcagcgaacggtccgaggccgacggcgaccacgaacagcatggcgaagaccaattcgtcaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcg                                                                                                         >  2:6535‑M2/20‑114 (MQ=255)
                                                                                                                                          ctTCGAGCTTGGTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaagcggcgaacgggctgggaaacccaacacggcgacaggttttcagcg                                                                                                      <  2:330331‑M2/251‑140 (MQ=255)
                                                                                                                                            tCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGCAA‑GCAGCTTGGAGAGCACGCCGGAGGTGTGGATAAACAGCGCCAGCCCGCCAGCACGCCAGCGAACAGGCCGAGGCCGCCGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGACAGGCGTCCCTCAAGCGGCGGACCGGCGGGTAAACCACCCACGGCACCCGGttt                                                                                                    >  2:130272/1‑251 (MQ=255)
                                                                                                                                             cGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCAGGGTCAATTGCTTCTACCGCTGCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccagttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgct                                                                                                    >  2:160405‑M2/1‑109 (MQ=255)
                                                                                                                                               aGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCCCGCCAGCACGCCAGCGAACGGGCCGAGGCCGGCGGCGACCACGAACAGCATGGCGAAGAACATTTCGTTAATGGCGCGGCAGGCGACCAAACGGCGGAGAACGGGCTGGTAAACCCACCACGGCAccggggttttg                                                                                                 >  2:401595/1‑242 (MQ=255)
                                                                                                                                                                ggCGCGAATGCCTTCCACCGGGCCAGGTTCAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggatttcggcgctcatcaggccaaaggggatgg                                                                                <  1:166830‑M2/251‑162 (MQ=255)
                                                                                                                                                                    cgAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATGTCGTTAATGGCGCGGTAGGCGTCCATCAGGCGGCGAACGGGCTGGTaa                                                                                                                         <  1:422083/206‑1 (MQ=255)
                                                                                                                                                                      aaggCCTTCCACCGGGCCGGGCTCAATCGCTTCGACAGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAATACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCAAAAGGGGAt                                                                          <  2:14373/248‑1 (MQ=255)
                                                                                                                                                                                cccgggccaggtTCGATTGCTTCTACCGCGTCGGAAA‑GCAGGTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccgccacggcaccaggttttcggcgctcatcaggccaaaggggagggagagaaccaccgccag                                                                >  2:392129‑M2/2‑74 (MQ=255)
                                                                                                                                                                                aCCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCAACAGGCCAAAGGGGATGGAGAGAacc                                                                >  1:80900/1‑251 (MQ=255)
                                                                                                                                                                                             cAATTGCTTCTACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaaggggatggagagaaccaccgccagcgcggtgcccc                                                     <  1:152169‑M2/249‑189 (MQ=255)
                                                                                                                                                                                              cactcgcgtgccccgttCGGAAAAGCAGTTTGGAGAGCTCGCCGGTGGGGTGGATAAGCAGCGCCAGCACCCCATCACGCCAGCGACCGGGCGGAGGCCGCCGGCGACAACGACCAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCGGGCGTCCATCAGGCGGCGAACGGGCTGGTAACCCCCCCACGGCACCAGGTTTTCGGCGCTAATCAGGCCAAAGGGGAGGGAGAGAACCACCGCCAGcgcg                                                    <  2:307056/235‑1 (MQ=255)
                                                                                                                                                                                                        cccGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACg                                        <  1:240443/250‑1 (MQ=255)
                                                                                                                                                                                                        aCCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGAGGCGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGCCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGCCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACg                                        >  1:321523/1‑251 (MQ=255)
                                                                                                                                                                                                               cGGAAA‑GCAGCTTGGAGAGCCCGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCAGGGCGAAGACCATTTCGTAAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGAtt                                  <  1:401595/250‑1 (MQ=255)
                                                                                                                                                                                                                ggAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaaggggatggagagaaccaccgccagcgcggtgccccagacggcgatttgcagcgtg                                 <  2:351628‑M2/250‑209 (MQ=255)
                                                                                                                                                                                                                ggAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTg                                >  1:267008/1‑251 (MQ=255)
                                                                                                                                                                                                                 gAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaagggtatggagagaaccaccgccagcgcggtgccccagacggcgatttgcagcgtgac                               >  1:59263‑M2/1‑41 (MQ=255)
                                                                                                                                                                                                                    a‑gcagcTTGGAGAGCACGCCGGTGGTGTGGATAAAAAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaaggggatggagagaaccaccgccagcgcggtgccccagacggcgatgtgcagcgtgacggc                            >  1:133122‑M2/1‑38 (MQ=255)
                                                                                                                                                                                                                     agaggcttggggtgcgcgcgggtggtGTGGTTAACCAGGGCCACCACGCCAGCACCCCACGGAACGGTCCGAGGCCGACGGCGACCCCTAACATCGTGGCGAAGCCAATTTCGTTAATGGCGCGGCGGGCGTCAATCAGGCGGCGAACTGGCTGGTAAACCCTCCACGTCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGTGTGGGGATAACCACCGCCAGCGCGTTGCCCCAGACGGCGATTTGCAGc                            <  2:162179/231‑1 (MQ=255)
                                                                                                                                                                                                                       cagcTTGGAGAGCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaaggggatggagagaaccaccgcccgcgcggtgccccagacggcgatttgcagcgtgacggcc                           <  1:214915‑M2/250‑215 (MQ=255)
                                                                                                                                                                                                                        agcTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGTTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGTg                         <  1:185913/251‑1 (MQ=255)
                                                                                                                                                                                                                          gtgggcgaccgcGCCGGTGGGGGGGATAACCAGCGCCAGCACGCCGTCGCGCCAGCGCGCGGCCCGAGGCCGACGGCGCCCGCGAACAGCAGGGCGAAGACCATTACGTTAAGGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAACCCCCCCACGGCCCCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGTTGGAGATAACCACCGCCAGCGCGGTGCTCCAGACGGCGTTTTGCAGCGTGAc                       <  2:231682/240‑1 (MQ=255)
                                                                                                                                                                                                                            tGGAGCGCGCGCCGGGGGTGGGGATAAACCGCGCCAGCCCGCCGGCACGCCAGCTAACGGGCCGAGGCCGACGGCTCCCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCAGCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTCCGGCGCTCATCAGGCCAAAGGGTATGGAGATAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGTGAC‑g                     <  2:257366/250‑1 (MQ=255)
                                                                                                                                                                                                                            tGGAGAGCACGCAGGTGGTGTGGATAACTAGcgccagcacgccagcgaacggtccgcgaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccaccgccccaggttttcggcgctcatcaggccaaaggggatggcgagaacccacgccaccgcggtgccccagccggcgatttgcagcgtgacggccctctcg                     <  2:200121‑M2/251‑221 (MQ=255)
                                                                                                                                                                                                                              gagaGCTCGGCGGTGGTGGTGATAAATGGcgccagcacgccggcgaacggtccgggaccgacggcggccacgaacagcagggcgaagaccatttcgttaatggcgcggcaggcgcccatcaggcggcgaacgggcgggtaaacccaccacggcaccaggtttgcggcgctcatcaggccaaaggggatggagagaaccgccgccagcgcggtgccccagacggcgatttgcagcgtgacggccatttcggt                   >  2:219439‑M2/1‑29 (MQ=255)
                                                                                                                                                                                                                                gagCACGCCGGTGGTGTGGATAAATAGcgccagcacgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaaggggatggagagaaccaccgccagcgcggtgccccagacggcgatttgcagcgtgacggccatttcggtga                 >  1:352359‑M2/1‑27 (MQ=255)
                                                                                                                                                                                                                                  gCACGCCGGTGGTGTGGATAAATAGcgccagaccgccagcgaacggtccgagaccgacggcgaccacgaacagcatggcgaagaccatttcgttaatggcgcggcaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaaggggatggagagaaccaccgccagcgcggtgccccagacggcgatttgcagcgtgacggccatttcggtgagg               >  1:226946‑M2/1‑25 (MQ=255)
                                                                                                                                                                                                                                   caggccgGTGGTGTGGAGAAATGGcgcctgcccgccagcgaacggtccgagacctacggcgcccacgaacagcatggcgaagaccatttcgttaatggcgcggtaggcgtccatcaggcggcgaacgggctggtaaacccaccacggcaccaggttttcggcgctcatcaggccaaaggggatggagagaaccaccgccagcgcggtgccccagacggcgatttgcagcgtgacggccatttcggtgaggt              >  1:265811‑M2/4‑24 (MQ=255)
                                                                                                                                                                                                                                              tgtgGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGCCCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGGACGGGCTGGTCAACCCACCACGGCACCCGGATTTCGGCGCGCATACGGCCAACGGGGATGGAGGGGAACACCGCCAGCGCGGGGCCCCCGCCGGCGATTTGCAGCG‑GACCGGCCCTTTCggggggggaat  >  2:373914/1‑242 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               
CTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAA‑GCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGTGAC‑GGCCATTTCGGTGAGGTAAT  >  NC_000913/4322553‑4323040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.