| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,748 | 0 | C | A | 33.3% | 47.5 / 11.1 | 41 | E55* (GAG→TAG) | nudF | ADP‑sugar pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (20/6); new base A (1/12); total (21/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.41e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAA > NC_000913/3177499‑3177990 | gtgtcccccccGGGCTTCCCAGGACACTAAACCCCGGTTGGGCCCGTTTGACTATCCGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑GGCATCACGCACTTGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCa < 2:205752/246‑1 (MQ=255) gggCTTCCCAGGAACCGTACCCCCGGTGTGGTCCGTTTGAATCCCATTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCGGCTCAATCAGCACAAC‑TGCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCcc‑g < 2:154429/251‑1 (MQ=255) ccAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCAcc > 1:273672/1‑251 (MQ=255) gAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGACCCGCCTCTTCCATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCCATCATCCCGGCAACCA‑TCTCCAG‑AAGCCACGGGGTTTCGCTGGAGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGCCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑CCAGCACCTCAt > 1:272014/1‑251 (MQ=255) aaCTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATg > 1:104144/1‑250 (MQ=255) gtgctcgtttgatatctcacccccGCCTCTTCACTCTCTCCCGGACGGGAAACATCTTCCACACTGTCGCCCTCTTCAACCACCCCGGAACCCA‑TC‑CCAGGTACCCAGGGGGTTTCGGGGGTGGCGTGCGCGCAAATCCGAATCTGCTAAACCGGCACACC‑CACACCACGCACGGGGT‑AAAGGTGTAGCAAGATGGCGGTTTGACCG‑CGCTAAAAAATTCCCC‑GCCGCACCTCATGACTCATTTGCCCGtt < 2:436404/230‑1 (MQ=255) ggcccttttgatctaccgcccccGCCCCTTCACCCGCTTCGCGCCGGGCAACATCTCCCCCCCTTCCCCCCTCTTCAACCAGCCCGGCACCCA‑TCCCCAG‑TAGCCAGGGGGTTTCGCTGGTGTCGTACGCGGCAACCCGAATCTGCACAATCAGCACAAT‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCAAAAAAATTTCCC‑GCCGCTCCTCATGACTCATTTGCCCGTTg < 2:398886/231‑1 (MQ=255) ggTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTgg > 1:398886/1‑250 (MQ=255) gctctgTTTCACTACCAGTCCCGCCTCTACAATCGCTCCGCGGCGGCAAACACCTTCCACTCTTCCCCCCCCTTCAACCACCCCGGCACCCA‑GCCCCAT‑TAGCCAGGGGGTTTCGCTGGTGTCGTCCGCGGCAATCCGAATCTCCTCAACCAGCACACT‑TTCATCACGCACTGGGTAAAAGG‑GTGGCAAGACGGCTGCGTGACCG‑CGCACAAAATTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTg < 2:424745/245‑1 (MQ=255) gTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAAt > 2:11283/1‑251 (MQ=255) ccccccTCTTCACTCGCGCCGCGACGGTCAACAGCTCCCACACTTACGCCCTATCCAACCATCCCGGCACCCA‑TCTCCAG‑GAGCCAAGGGTTGGCGCGGGTGTCTGACGCGGAAATCCGAATCGGCGCAATCAGCGCAAC‑TTCACCACGGACTGGGACAAGGG‑GTAGCAAGCGTGCGGCGTGCCCG‑CTCTAAAATATTCCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCt < 2:155721/247‑1 (MQ=255) ccccccTCTTCAACCGCTCCGCGACGGGCAACATCTTCCACACTTTCCCCCTCTTCAACCACCCCGGCAACCA‑TCCCCAG‑TAGCCAAGGGGTTTCGCGGGTGTCGTACGCGGCAATCCAAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTAAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCt < 1:437079/247‑1 (MQ=255) cgccttcccattCGCTTGGCGACGGGGAACACCGTCCACACGTCCCCCCTCTTCAATCACCCCGCCAACAAATC‑CCAG‑TGGCCAAGGGGTTTCGGTGTTGGCGGACGCGTAAATGCGATTCTTCTCAAGCAGCAAACC‑TTCACCCCGCACTGGGTCAAGGG‑GTAGAAAGACTGCGGCTGGACCG‑CGCAAAAAAGTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCtat < 2:441847/240‑1 (MQ=255) gCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg > 1:89491/1‑250 (MQ=255) ccaccATCTTCCACACTTCCCCCCTCTTCAATCACCCCGGCACCCA‑TCCCCAG‑TAGCCAGGGGTTTTCGCTGGTGTCGCACGCGGCAATCCGAATCTGCTCAATCAGCACATC‑TTCACCACGCCCTGGGTAAAAGG‑GTAGCAAGACGGCGGCGTGACCG‑CGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcgcg < 1:11283/247‑1 (MQ=255) cAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcgcg > 1:17842/1‑250 (MQ=255) cccTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGCATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCaat > 1:162874/1‑251 (MQ=255) ttCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGCTTCGCTGGTGTCGTACGCGGCAATCCGCATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTACTGAAAAAAAGCCGCGATAAAgt > 1:425975/1‑232 (MQ=255) atcatcCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTCCGAGGACATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTAc > 1:271908/1‑251 (MQ=255) tcctaccaaaCCA‑TCCCCAG‑TAGCCAAGGGGTTGCGCTGGTTTCGTACGCGGCAATCCGAATCTGCCCAACCACCACAAC‑TCCATCACCCACTGGGTCAAAGG‑TTAGCAAGTCTGCGGCGTGCCCG‑CGCAAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACAt < 2:418837/242‑1 (MQ=255) aaCCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGACTAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGc > 2:291408/1‑251 (MQ=255) aaCCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACAt > 1:418837/1‑242 (MQ=255) tctcCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGCAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAAt > 1:108581/1‑251 (MQ=255) g‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGTAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACg > 2:334973/1‑251 (MQ=255) gggttttCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAAGCAGCACAAC‑TGCATCCCGCACTGGGTAAAAGG‑GGAGCAAGACTGCGTCGTGACCG‑CGCGGAAAAAGTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGAc < 1:433904/153‑1 (MQ=255) ggggTTTCGCTGGAGTCGTACGCGGCAATCCGACTCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAACGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGAACCTCATGACTCATTTGCCCGTTGAATAGACGATGAc > 2:433904/1‑157 (MQ=255) gggTTTCGCTGGGGTCGCCCGCGGCATACGGAATCTGCCCAATCAACAAAAC‑TTCATCCCGAAGGGGGACAAAGG‑GAAGCAAGCCGGCGGCTGGCCCG‑CGTTAAAAATTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTg < 2:4369/251‑1 (MQ=255) tCGCTGGGGTCGTACGCGGCAATCCGAATCTGCTAAACCAGCACACC‑TTCATCCCGCACTGGGTAAAAGG‑GTAGCAAGCCTGCGGCGTGCCCG‑CGCAAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTg < 1:15261/250‑1 (MQ=255) cGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCAtt > 1:372163/1‑251 (MQ=255) gcggaaatcaaaagcTGCTAAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACGGCGGTGGGACCG‑CGCAAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTaa < 2:89491/237‑1 (MQ=255) cccaaTCTGCTCAATCATC‑CAACCGTCACCACGCACTGGCTCAAAGT‑GGAGAAAGACCACGGCGTGCCCG‑CGCT‑AAAAATTTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGTCGAGGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGGGCTATAATTTCAACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGGTTAATCATTGTTAATGTCCTgg < 2:139999/248‑1 (MQ=255) cGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCACAGG‑GTAGCAAGACAGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGCCTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGc > 2:277940/1‑251 (MQ=255) tCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGt > 1:9337/1‑251 (MQ=255) acaacttaaccccgcagggggcaaaaGG‑GTAGCAGGCCTGCGGCGT‑ACCGGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCATGTTGTCTGGCTTAAGCATTGTTAATGTTCTGGCACTAATAGTGAATTAAAt < 1:353883/228‑1 (MQ=255) tcatcaCGCACTGGGTCAAAGG‑GTAGCAAGCCTGCGGAGTGAACC‑CGCTACAACATTTCCC‑GCCGCCCCTAATGACTCATCTGCCCGTTGCATAGACGCTGACGAAATCTATAAAGATCTAATGCAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAt > 1:447684/1‑251 (MQ=255) ccccggggtaagaGG‑GTAGCAAGGCTGCGGCGGGCCCG‑CTATCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCg < 2:67396/239‑1 (MQ=255) tCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTg > 1:434640/1‑250 (MQ=255) aaaggggtgccaagccggcggcgGGACCG‑CCCAAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGa < 2:372163/233‑1 (MQ=255) gcggcgTGCCCC‑CGCTCAAAAATTCCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCa < 2:17842/251‑1 (MQ=255) gcgTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCAtgt > 1:345842/1‑251 (MQ=255) cccG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTaa < 1:270955/250‑1 (MQ=255) | TGGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCA‑TCTCCAG‑TAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAAC‑TTCATCACGCACTGGGTCAAAGG‑GTAGCAAGACTGCGGCGTGACCG‑CGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAA > NC_000913/3177499‑3177990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |