| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,833,567 | 0 | T | G | 42.1% | 49.4 / 10.2 | 57 | G364G (GGT→GGG) | norV | anaerobic nitric oxide reductase flavorubredoxin |
| Reads supporting (aligned to +/- strand): ref base T (10/23); new base G (24/0); total (34/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.86e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ACGCGTGGCGGTGAAAATTTTCAACGTCGCCCGAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCAAAAGGCGAGCCAATGCAGGACGTTGC > NC_000913/2833318‑2833815 | aCGCGTGGCGGTGAAAATTTTCAACGTCGCCCGAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGtt < 2:90679/251‑1 (MQ=255) gcgTGGCGGTGAAAATTTTCAACGTAGCCCGAAGCGATAAAAACGAAATCCTGACTAAGGTCTTCCGCTCAAAAGGCGTGGTGGTCGGCTCTTCGATGATGAAGAACGTGATGATGCCGAAAATCGCGGGGCTGGTGGAGGAGATGACTGGTTTACGCTGCCGTAACAAACACGCCAGTGCTTTCGGCTCTCACGGCTGGTGCTGCTGTGTTGTGTATCGGCTTT‑CCACGCGCCTGCAGGATGCGGGTTTc < 1:286934/251‑1 (MQ=255) gTGAATATTTTCAACGTCGACCGAAGCTATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCGGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGTCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTc < 1:228402/251‑1 (MQ=255) aaTTTTCAACGTCGCCCGCAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGAGGGGGGTCGTCCTT‑CCACCCGCCCGCAGGGTGGGGGGTTCgcaaaggagctt > 2:364809/1‑239 (MQ=255) tttCAACGTCGCCCGAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGc < 1:401044/250‑1 (MQ=255) gAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATgg < 2:396330/251‑1 (MQ=255) gAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGGTTCGAAATGTCGCTTAACC‑TGAAAGCGAAATgg > 1:335583/1‑251 (MQ=255) aaaaaCGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTGCGAAAGGTCGCTTAGCC‑TGAAAGCGAAATGGCgaccaga < 1:57168/251‑1 (MQ=255) aaTCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGGTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACg > 1:362973/1‑251 (MQ=255) tCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGCCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGGGCGGGGGGTTGTCTTT‑CCACGCGCCTGCCGGGTTCGGGTTTCGAAATGTCGCTTAGCC‑CGAAAGCGCAATGGCGACCCGACCAGGACGct > 1:172488/1‑251 (MQ=255) gACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACGTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGTCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGctct < 1:455256/249‑1 (MQ=255) cTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTAGACGATGCATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGAACGTCTTT‑CCCCACGCCCGCAGGGTGCGGGGTTCGAAATGTCGCTTAGCC‑TTAAACCGAAATGGGGGCCACACCAGGACGCCCTGa > 1:189755/1‑249 (MQ=255) ttCCGCTCAAAAGGCGTGCTGGTCGGCACTTTGACGATGAATAACGAGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGAGGGGGGTCGTCTTT‑TCCCGCGCCTGCCGGGTGCGGGGTTCGCAAGGACGCCTTGCC‑CGAAAACGAAATGGCCGCCAGACCAAGACGCTCTGAAGTTTTGCCg > 1:279034/1‑251 (MQ=255) tCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGATTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCCTCTTT‑CCACCCGCCCGCAGGATGCGGGGTTCGAAATGTCGCCTAGCCCTGAA‑GCGAAATTGCGACCCGACCAGGACGCGCTGTAGttcagccgg > 1:445627/1‑244 (MQ=255) cAAAAGGCGTGCTGGTCGGCACTTCGACGATTAATAACTTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGAGGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑Aac < 2:308028/249‑1 (MQ=255) cAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGGTCGTCTTT‑CCACGCGCCTGCAGGATGCGGGGTTCGGAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGGCGCTCTGAAGGTATGCCGTG‑Aaca‑c > 1:225648/1‑251 (MQ=255) aGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGGTCGTCTTT‑CCACGCGCCCGCCGGGTGCGGGTTTTGAAATGTAGCCTTGCC‑TGGCAACGGAATGGCGGGCAAGCCAGGACGCTCTGAAGGTTTGCCgggataaacggc > 2:461637/1‑240 (MQ=255) cGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGGTTCGAAATGTCGCTTAACC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGCAGTTATGCCGGG‑AACA‑CGGTCGCGAAATCGccc > 1:305069/1‑251 (MQ=255) gacgaTGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGATCGTCTTT‑CCACGCGCCCGCAGGATGCGGGGTTCGGAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCCGGACGCTCTGTAGTTATGCCGTG‑AACA‑CGGGCGCGAAATCGCCCCTCAGTggg > 1:416388/1‑251 (MQ=255) acgaTGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGAGCCGTGGGTCGTCTTTTCCA‑GCCCCCGCAGGCTGCGGGGTTCGAAAAGTCGCCTATCC‑CTAAAGCCAAATAGCGAGCCGACCAGGACGCTCTGGAGTTATTCCGGG‑AACA‑CCGTCCAGAAAACGccccccagtcggg > 2:363737/1‑241 (MQ=255) cGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGAGCGGTGGATCGTCTTT‑CCACGCGCCTGGAGGATGCGGGGTTCGAAATGTCGCTTTGCC‑TGAAAGCGCAATGGCGACCAGACCAGGACGCTCTGAAATTATGCCGGG‑AACC‑CGGTCGCGAAAACGCCCGGCAGTGGGCGCTCGcgccgc > 1:374531/1‑251 (MQ=255) tgatgaTGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGGGCGTCTTT‑CCACGCGCCTGCAGGATGCGGGGTTCGAAATGTCGCCTAGCC‑CGCAAGCGCAAAGGCGGACAGACCAGGACGACCTGAAGTTATACCGTG‑GACA‑CGGTCGCGAAAACGCCCCGCAGGGGGCGCCCCcgccgccg > 2:225516/1‑249 (MQ=255) gCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTGTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTAGGCCGTG‑ATCA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCaga < 1:203561/251‑1 (MQ=255) gCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGATCGTCTTT‑TCACGCGCCTGCAGGATGCGGGGTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAAAGGCGACCCGACCAGGACGCTCTGGAGGTATGCCGTG‑AAAA‑CGGTCGCGAAAACGCCCGGCAGTGGGGGCTCGCGCCGCTGCCGGAGAGCACggggg > 1:215911/1‑247 (MQ=255) ccGGGTTGGTGGAGGAGATGAGTGGTTTACGCTTCCGTAGCAAGCGCGCCAGTGCGTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGTATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAGATGGCGCTTAGCC‑TTGAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGGGAAATGGCCCGTCGGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAAt < 1:231982/251‑1 (MQ=255) cGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGAGCGTCTTT‑TCACGCGCCTGCCGGGTGCGGGGTTCGAAATGTCGCTTTGCC‑TGGAAGCGAAAAGGCGACCCAACCAGGGCGCTCTTAAGTTTTGCCCTGGAAC‑‑CGGTCGCGGACACGCCCCGCAGTGGGCGGCCCCGCCGCTGCCCCAGAGCCCgggggaa > 2:282690/1‑245 (MQ=255) cTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGGTCGTCTTT‑CCACGCGCCTGCAGGGTGCGGGGTTCGGAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCCGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGGGAATAC‑ggg > 1:72427/1‑250 (MQ=255) tggtggAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGGTCGTCTTT‑CCACGCGCCCGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAACGAAATGGCGGCCAGACCAGGACGCTCTGGAGGTATGCCGTG‑AACA‑CGGTCGCGAAAACGCCCGTCAGTGGGCGCTCCCGCCGCTGCCGCCGAGCACGGGGGATAC‑ggg > 1:66170/1‑249 (MQ=255) tggtggAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCCCGAAAACGCCCGTCAGTGGGCGCTCGGGCCGCTGCCGCCGAGCCCGGTGAATAC‑GGt > 1:427758/1‑250 (MQ=255) tggAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGGTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGGCCAGACCAGGACGCTCTGAAGTTATGCCGGG‑AACA‑CGGTCGCGAAATCGCCCGTCCGTGGGCGCTCGCGCCCCTGCCGCCGAGCACGGGGAATAC‑GGTAggt > 1:344739/1‑249 (MQ=255) ggaggaGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGGGGATCGTCTTT‑TCCCGCGCCTGCAGGGTGCGGGGTTTGAAATGTCGCTTAGCC‑TGAAAGCGGAATGGCGGCCAGAACAGGACGCTCTGGAGGTATGCCGTG‑AACA‑CGGTCGCGGAAACGCCCGCCAGTGGGCGCTCCCGCCGCCGCCCCCGAGCACgggggataaggtggttg > 2:73465/1‑236 (MQ=255) gagaTGCCTGGTTTGCGGTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCGCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTCT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑Aaaga < 2:335973/251‑1 (MQ=255) gagaTGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGGTCGTCTTT‑CCACGCGCCTGCAGGATGCGGGGTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGGG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCCCCGAGCACGGGGGATAC‑GGGAGTT‑aa > 1:182600/1‑248 (MQ=255) gggcTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTGTCGGCTCTAACGGCTGGGGCGGCGGTGCGGTGGATCGACGTT‑CCACGCGCCTGCAGGATGCTGGTGTCGAAAGGTCGCTTAGCC‑TGAAAGCGAAAGGTCGACCAGGCCATGACTCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGGAAGCCCCCGTCAAGGGGCGCTCGCGCCGCTGCCGCAGAGCACGAGGAATAC‑GGTAGAT‑AAAgaagaa < 2:279034/248‑1 (MQ=255) gACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCGTAGCC‑TGAAAGCGAAATGGCTTCCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGTCTCTGGCTCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGaaa < 1:217188/251‑1 (MQ=255) gtgtACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGGTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCACGCGCCGCGGCCGCAGAGCACGGGGAATAC‑GGTAGTT‑AAAGAAGAAA‑Cctct < 2:25323/248‑1 (MQ=255) gTTTACGATTCCGTAACAAACGCGTCAGTGCTTTCGGCTCTCAAGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCTGTG‑AACA‑CGGTCGCGAAAGCGCGCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAT‑Cctct < 2:212866/251‑1 (MQ=255) gtcctgtttgcgaatctttttcgcCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGGTAGGCTTT‑CCCCGCGCATGCAGGGTGCGGGGTTTGGAATGTCGCTTAGCC‑TGGAAGCGAAATGGCGGCCCGACCAGGACGCCCTGAAGTTATGCCGTG‑AAAA‑CGGTCGCGCAATCGACCGTCAGTGGGGGCACCCGCCGCTGCCGCCGGGCACGGGGGA‑ACAGGTAGGT‑AAAGAAGAAA‑ACTCTg > 2:283582/22‑251 (MQ=255) gTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGATGGAGCGGCGGTGCGGGGGGTAGCCTTT‑CCCCGCGCCTGCAGGGTACGGGGTTCAAAATGGCGATTAGCC‑TGGAAGCGCAACGGCACCCCGACCACGACGCCACGAAGGTATGCCGTG‑AAAA‑AGGTCGGGAAATCGCCCCTCACTGGGCGCTCGCGCCGCTGGCGGAGCACACCGGGAACAC‑GGTAGTT‑aacgacaaaaaccctgcccccaccgcc > 1:441105/1‑226 (MQ=255) gcgcCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGGCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGCCGCTCTGAAGTTATGCCTTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTc < 1:457962/251‑1 (MQ=255) gTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCa < 1:267209/251‑1 (MQ=255) gCTTTCGGCTCTCACGGCTGGAGCGGCGGGGCGGGGGATCGTCTTT‑CCCCGCGCCCGCAGGATGCGGGGTTCGGAAAGTCGCTTAACC‑TGAAAGCGAAAAGGCGACCAGACCCCGGCGCTCTGAAGATATGCCGTG‑AACA‑CGGTCGCGAAAACGCCCGCCAGTGGGGGCTCGCGCCGCGGCCGCCGGGCCCCGGGAATAA‑GGGAGGT‑AAAGAAGAAAACCTC‑GCCACCCAC‑ACAGCTGGCCTCCGCCCACg > 2:145719/1‑251 (MQ=255) tCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGGTCGTCTTT‑TCACGCGCCTGCCGGGTGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCCCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑ACCCTGCCACC‑CCCACGGCTGACCCCGGCCCCCGGAtg > 1:425695/1‑251 (MQ=255) ggCTCTCACGGCTGGAGCGGCGGTGCGGTGGATTGTCTTT‑TTACGCGCCAGCAGGGTGCGGGGTTCGGAATGGCGCTTAACC‑TGAAAGCGAAATGGCGACCAGGCCAGGACGCCCTGGAGTTATGCCGGG‑GACC‑CGGGCGCGAAATCGCCCGTCCATGGGCGCCCGCGCCGCTGCCGCAGGACACGGTGAATAC‑GGGAGTTGAAAGAA‑AAA‑CCTCTGCCCCC‑ACGACGGCCGAACTCgggccccgggaggg > 2:64325/1‑239 (MQ=255) ctctCACGGCTGGAGCGGCGGGGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGCTGCGGGGTTCGAAATGTCGCTTATCC‑TGAAAGCGAAATGGCGACCCGCCCACGACGCTCTGCAGTTATGCCGTG‑AACAACGG‑CGCGAAATCGCCCCCCCGTGGGCGCTCCCGCCCCCGCCCCCGAGCACGGGGAATAC‑GGTAGTT‑ACAGAAGAAA‑ACTCCGCCACC‑ACGACGGCTGAcacccgcccccgggggca > 2:165292/1‑232 (MQ=255) aCGGCTGGAGCGGCGGTGCGGTGGATCGGCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGGCGCTCTGAAGTTATGCCGTG‑AACT‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGTCGTTTCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGc < 1:448771/251‑1 (MQ=255) tGGAGCGGCGGTGCGGGGGATCGTCTTT‑CCACGCGCCTGCCGGGTGAGGGGTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAAATGCGACCAGACCAGGACGCTCTGCAGTTTTTCCGTG‑AACA‑CCGTCGCGGAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGGGGATAC‑GGTAGGT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGCAGGGTGGCCTCGGCCCACggcttacgtgcagcggctg > 1:188538/1‑234 (MQ=255) gcggtgcggtGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGGCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTTACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTgg < 2:446378/251‑1 (MQ=255) gATCGTCTTT‑CCACGGGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGAGGCAGTGCAGCGTCGGCCAGTGGATTTACGATcc < 2:432060/251‑1 (MQ=255) gTCTTT‑CCACGCGCCTGCCGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCACGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCCCC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGc > 2:195960/1‑250 (MQ=255) gTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCa < 1:73465/251‑1 (MQ=255) tCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCa > 1:278543/1‑250 (MQ=255) tt‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCaaacg > 2:25981/1‑249 (MQ=255) tt‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCaaa > 1:68298/1‑249 (MQ=255) ggATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTTACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGAGCCGGCAAAAGGCGAGCCAATGCAgg < 2:215911/251‑1 (MQ=255) gATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCAAAAGGCGAGCCAATGCAGGa < 1:364809/251‑1 (MQ=255) gggTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGCCCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCAAAAGGCGAGCCACTGCAGGACGTTg > 2:82630/1‑251 (MQ=255) ggTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCAAAAGGCGAGCCAATGCAGGACGTTgc < 2:182600/251‑1 (MQ=255) | ACGCGTGGCGGTGAAAATTTTCAACGTCGCCCGAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTT‑CCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCC‑TGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTG‑AACA‑CGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATAC‑GGTAGTT‑AAAGAAGAAA‑CCTCTGCCACC‑ACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCAAAAGGCGAGCCAATGCAGGACGTTGC > NC_000913/2833318‑2833815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |