| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 494,550 | 0 | G | C | 28.9% | 81.6 / 11.6 | 45 | R49P (CGG→CCG) | recR | recombination mediator protein RecR |
| Reads supporting (aligned to +/- strand): ref base G (5/27); new base C (13/0); total (18/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.17e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGACGCAGCACGTCGTATTGAAGAAACGCAGAAAGAAAAAATGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTGATCGTCTGG > NC_000913/494309‑494789 | cgacgCAGCACGTCGTATTGAAGAAACGCAGAAAGAAAAAATGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTc < 2:338008/251‑1 (MQ=255) ggtgtATTGAAGAAACGCAGAAAGAATAAAGGGCCTCTGTAGCCGCCGGAATGCAGCTGCCGGCTGGCTTTAAGATGACGTTTTGACGCAAACCAGCCTGATGTTAACACAGCTTATGGAAGCACTGGGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCATCGTATTGAGTTCACGCTGCTGCATCGCGATCTGAGTGGCGGGATGCTTCGGGCGCATGCGCTCACCCGGGCGATGGCGGAAATC‑GGcc < 2:277510/248‑1 (MQ=255) aTTGAAGAAACGCAGAAAGAAAAAATGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGAGGCAACCCAGCCCGCTGTTAGCACAGCTTAGGGAAGCACTGCGCTGGCTGCCGGGCGTGGGCCTGAAGACGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGCTGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTg < 2:109251/250‑1 (MQ=255) gaaaAAATGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑c < 1:228155/251‑1 (MQ=255) aaaaTGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CAcc < 1:430655/251‑1 (MQ=255) aaaTGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGATTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGGAGCGTCTGGGGGCGGCGCCCCCCCCGGGGGTGTCGGAAAAC‑GGGC‑ACTGCGcccagtgccccccctttcccg > 1:387349/1‑232 (MQ=255) gCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAg < 1:25157/251‑1 (MQ=255) gTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGGGGCGTCTGGGGCAGGCGCTCACCCCGGCGGTGTCGGGAATC‑TGCC‑ACCGCGCCGATTTCCGCCCTTT‑CACCGACAAGGAAGTc > 1:87166/1‑251 (MQ=255) tATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGGTGCGTCTTGGGCAGGGGCTCCCCCCGGGGATGTCGGAAAAC‑GGCC‑CCCGCGCCGCTTTCCGCCCTTT‑CCCCGAACAGGaaagct > 1:453055/1‑247 (MQ=255) aTCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCt < 1:238042/250‑1 (MQ=255) cctccGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGGGTCTGGCGCAGGCGCGCAACCCGGCGGTGTCGGAAATC‑GGCCCACT‑CGCCGGTTTCCGCACTTT‑CACCGAACAGGAAgacttt > 1:274503/1‑245 (MQ=255) tccGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGGTGCGTCTGGGGCAGGCGCCCCCCCCGGCGCTGTCGGAAAAC‑GGCC‑CCCGCGCCGCTTGCCGCCCTTT‑CCCCCAACACGAAGGCTGTaa > 2:177611/1‑250 (MQ=255) ccGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCTGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGGCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTaa < 2:43318/249‑1 (MQ=255) cGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACAt < 2:315064/251‑1 (MQ=255) aGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGGCTGGGGCAGGCGCTCCCCCCGGCGGTGGCGGAAAACAGGCC‑‑CTGCGCCCGGTGCCGCACGTT‑CACCGGACAGGGAGTCTGTAAAATCTTTTccg > 1:14963/1‑249 (MQ=255) gCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCgtcgtc < 1:315499/251‑1 (MQ=255) gTTCTGCTGCAAACCAGCCCGCTGTCAACACCGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGGTGCGGCTGGCGCAGGCGCTCCCCCCGGGGATGTCGGGAATC‑GGCC‑CCCGCGCCGATTGCCGCCCTTT‑CACCGGACAGGAAGGCTGTAACATCTGGTTGGATCCGCgtcgtccggcaaaagggc > 2:62479/1‑238 (MQ=255) gATGCAATCCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGTATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑GCTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAAt < 1:264787/249‑1 (MQ=255) cccGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCTTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCGCACCCGTGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTTCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCTCTTCGTCAGGAAAACGGTCAAATCTGCGTGGTGgaga < 1:424626/251‑1 (MQ=255) cGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGAGGCGTCTGGCGCCGGCGGCCACCCCGGCGCGGTCGGGAATC‑GGCC‑ACCGCGCCGCGTGCCGCCCTTTTCACC‑AAAAGGAAAGCTGTAACAACTGTTCGAATCCGCTGCGTCCGGGAAAAGGTCAAATcctcgtgggggggagg > 2:357861/1‑236 (MQ=255) tAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGGCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTCCGCCGAATGCCGCCCTTT‑CACCCCACAGGAAGTCTGTAACAACTGTTCGAATCCGCGTCGTCAGGAAAACGGTAAAAACTGCGTGGTGGAGAGTCcggcg > 1:472268/1‑251 (MQ=255) cacaGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGAc < 1:177611/251‑1 (MQ=255) ttATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGAGGTGTCTGGCGCAGGGGCTCCCCCCGGCGATGTGGGGAAAC‑GGCC‑ACCGCGCCGCTTGCCGCCCCTT‑CACCCAACAGGAAGCCTGTTACATCTGTTCGAATCCCCGGCGTCAGGGAAACGGGGAAATCTTCGGGGTGGAGAGGGcggcgggcagctcc > 2:237460/1‑243 (MQ=255) tGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGAAGGGTCGGGGGCAGGGGGCCACCCGGGCGATGTCGGAAATA‑GGCC‑CCAGCGGCGACTGCCGCAACTT‑CACCGAAACGGAAGTCTGTAAAATTTGGTGGAATCCGCGGCGGCCGGAAAAAGGTCAAATCTGCGTGGGGGGGAGGCCGGCGGGCAATTTCGCCATTGAga > 1:224159/1‑248 (MQ=255) gcgcTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAg < 1:473834/250‑1 (MQ=255) gCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCTGTCACGCTGTTTCGTCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCGTTAACATCGGTGCGTATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGGGGTGGAGGGTGCGGCGTACATCTACGCCATTGAGCGGACGGGGc < 2:322202/248‑1 (MQ=255) ccgcgCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTGCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCGCACCCGGGCGATGTCGGAAATC‑GGCC‑ACGGCGCCGATTGCCGCACTGT‑CACCGAACAGGAAGTCTGTAACATCTTTTCGAATCCGCGTCGTCAGTAAAACGGTCAAATCTGCGTTGTGGAGAGTCCGGCGGTCATCTACGCCATTGAGCAGACGGTGCAGtt < 2:197806/247‑1 (MQ=255) gCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCa < 2:14952/251‑1 (MQ=255) aaGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGACTGGCGCCGGCACTCACCCCGGCGATGTTGGAAAAC‑GGCC‑CCCGCGCCGGTTGCCGCACATT‑CCCCGAAAAAGAAGTCTGGAAAATCTTTTCGGATCCGCGTCGCCAGGAAAACCGTCAAATCTGCGAGGTGGAAAGACCGGGGGGCATCTACCCCATTGGGCAGACGGGGcgggcttccaggcgttattt > 1:157744/1‑232 (MQ=255) gTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTtg < 1:26355/251‑1 (MQ=255) gTCGGCGCAGCGTATGGCGGTCACGCTGCGTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGAGGGCGGAAATC‑GGCC‑ATTGCGCCGATTGCCGCACGTT‑CACCGAACAGGAAGGCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTGAAATCTGCGTGGTGGAGAGTCCTGCGGACGTGTACGCCATTGAGCAGACTGGGCAGTTTGCAGGTCGATATTTtg < 2:20650/251‑1 (MQ=255) cAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCCGGCGCTCCCCCCGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCCATTGCCGCACTTT‑CACCGCACAGGGAGTCTGTAACATCTGTTCGAATCCCCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGGGAGTCCGGCGGGCATCTACGCCCTTTAGCAGACGGGGGCGTTTTCAGGTCGTTTTTTTTTGtttgt > 1:40712/1‑248 (MQ=255) gctgctTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGGGCAGGCGCTCACCCCGGCGATGGCGGGAATC‑GGGC‑ACCGCGCCGATTGCCGCACCTT‑CTCCCAACAGGGAGTCTGTAACAACTGTTCGAATTCCCGCCGTCCGGAAAACGGGCCAATCTGCGTGGTGGGGAGGTCGGGGGGCATCTACGCCCTTGAGCAGGCGGGGGAGGTTTCTGGGCGTTTTTTTTTGTTGGTgggggctcttgcaccgc > 2:363197/1‑238 (MQ=255) ctTCAGCGCGATCGTAGCGGCGGGATGCGGCTGGCGCAGGCGCTCCCCCCGGCGATGTCGGGAATC‑GGCC‑ACTGCGCCGATTGCCGCCCTTT‑CCACGAACAGGGAGTCTGTAACAACTGTTCGAATCCGCGGCGGCCGGGAAAAGGGCAAAACTTCGTGGTGGGGAGTCCGGCGGACAACTACGCCATTGAGCAGACGGGGGAGGTTTCCGGGCGTTTTTTTGTGTTGATGGGGGATCTGTCACCCCTggg > 1:196852/1‑250 (MQ=255) aGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTGATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGc < 1:174546/251‑1 (MQ=255) gcgATCGTAGCGGCGGTATTCGTCTGGCGCAGTCGCGCACCCGGGCGATGTCGGAAATC‑GGCC‑ACGGCGCCGATTGCCGCACTTT‑CACCTAACAGTAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGATGCCTGCGGACAGCGACGCCATTGAGCATACGGGGCAGGTGTCAGGTCTTGATGCTGGGTTTATTGGGCATCTGTCACCGCTGGAAGGCATc < 2:438124/251‑1 (MQ=255) gcgAGCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATc < 1:424036/251‑1 (MQ=255) gTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGc < 1:89719/189‑1 (MQ=255) ggcggGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGgatg > 1:251416/1‑250 (MQ=255) gggATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGatat > 2:113740/1‑251 (MQ=255) tGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGgag > 2:18838/1‑134 (MQ=255) tGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGgag < 1:18838/134‑1 (MQ=255) ggCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTg < 1:28671/248‑1 (MQ=255) ggCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTGa < 1:386890/249‑1 (MQ=255) ggCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTGATCGTCTgg < 1:153702/251‑1 (MQ=255) | CGACGCAGCACGTCGTATTGAAGAAACGCAGAAAGAAAAAATGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATC‑GGCC‑ACTGCGCCGATTGCCGCACTTT‑CACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTGATCGTCTGG > NC_000913/494309‑494789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |