Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,090,238	688 bp→GGGGATCTTGAAGTTCCTATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTTGAAGCT		[yggI]–[endA]	[yggI], [endA]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3090238	3090925	688	71 [0]	[0] 53	[yggI]–[endA]	[yggI],[endA]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3090237	0 (0.000)	40 (1.260) +GGGGATCTTGAAGTTCCTATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTTGAAGCT	38/328	0.1	100%	coding (483/498 nt)	yggI	protein YggI
	?	NC_000913	3090926 =	0 (0.000)					coding (580/708 nt)	endA	DNA‑specific endonuclease I

GGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAACCATCTGAACTATCAGGAACTTTCCTGATCTGGCTGATTGCATACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTA  >  NC_000913/3089994‑3090486                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                          ggCACATTTGCTGGTATGGAAACATTTCGGCCGAGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGAGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatc                                                                                                                                                                                                                                                    >  2:268109‑M1/1‑244 (MQ=255)  gCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGGGAACAGggggatct                                                                                                                                                                                                                                                   >  2:440303‑M1/1‑243 (MQ=255)        ttGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGAGGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaag                                                                                                                                                                                                                                              <  2:145939‑M1/250‑14 (MQ=255)        ttGCTGGTATGGAAACATTGCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaag                                                                                                                                                                                                                                              <  2:146731‑M1/250‑14 (MQ=255)           gtgGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGAGGATGGAAATCGTGCTGGGTGTGCCCGCCCGTCGGACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCGTCCCCTTCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGGACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTAGCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcc                                                                                                                                                                                                                                          <  2:203423‑M1/250‑18 (MQ=255)               tATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTAACTGCGGTGAACAGggggatcttgaagttcctatt                                                                                                                                                                                                                                      >  1:386751‑M1/1‑230 (MQ=255)                  ggAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGGCGCAACACCTTCCCCTACCGCTGCAAGGGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattcc                                                                                                                                                                                                                                    <  1:266338‑M1/250‑24 (MQ=255)                    aaaCATTTCGGCCGCGGAGCGCCACCGGGCAAAGAGAGGAAGGGGAGGATGGAAAACGTGCTGTGTTTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACCCCGTCCCCTTCCGCTGCAAGTGCCAGGGGCATCATCTTTCCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGTCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttccgattccgaa                                                                                                                                                                                                                                 <  2:112192‑M1/251‑27 (MQ=255)                           tCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccg                                                                                                                                                                                                                                   <  1:360254‑M1/242‑25 (MQ=255)                           tCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccg                                                                                                                                                                                                                                   >  2:360254‑M1/1‑218 (MQ=255)                             ggCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctatt                                                                                                                                                                                                                        >  2:382100‑M1/1‑216 (MQ=255)                                     cctcttccgacctaaagggtggaaggggaGGATGGAAACCGTGCTGGGGGTTCCCCCCCGCCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCACCACCTTCCCCTACCGCGGCAAGTGCCGGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaa                                                                                                                                                                                                                <  2:16689‑M1/238‑44 (MQ=255)                                      gcgcCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACGGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatctggaagttcctattccgaagttcctattctctagaaa                                                                                                                                                                                                               <  1:26219‑M1/251‑45 (MQ=255)                                           acaTGGCAAAGAGTGGAAGTGGATGCTGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggg                                                                                                                                                                                                                                                        >  2:206393‑M1/1‑202 (MQ=255)                                           acaTGGCAAAGAGTGGAAGTGGAGGAGGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGGGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggg                                                                                                                                                                                                                                                        <  1:206393‑M1/205‑4 (MQ=255)                                            caTGGCAAAGAGTGGCAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtat                                                                                                                                                                                                           >  2:413189‑M1/1‑201 (MQ=255)                                                  aaaGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaactt                                                                                                                                                                                                   >  1:407766‑M1/1‑195 (MQ=255)                                                  aaaGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaa                                                                                                                                                                                                                >  1:16689‑M1/1‑195 (MQ=255)                                                  aaaGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTACCCGCCCGTCGCACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTATATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaactt                                                                                                                                                                                                   >  1:435868‑M1/1‑195 (MQ=255)                                                       gtggaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcag                                                                                                                                                                                                >  2:438499‑M1/1‑190 (MQ=255)                                                       gtggaagtggaTGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacatcagag                                                                                                                                                                                              <  1:132190‑M1/251‑62 (MQ=255)                                                          ggagtggatgATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgc                                                                                                                                                                                           >  1:43300‑M1/3‑187 (MQ=255)                                                           aagtgtaTGAGGGAAAACGTGCTGGGTTTTCCCCCCCGTCGTACGCCGCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTCCCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggatcttcagagcgct                                                                                                                                                                                          <  2:284756‑M1/251‑66 (MQ=255)                                                                gatgatGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCCCTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaa                                                                                                                                                                                                               >  2:448103‑M1/1‑181 (MQ=255)                                                                gatgatGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaa                                                                                                                                                                                                               <  1:448103‑M1/225‑45 (MQ=255)                                                                   gatgGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTCCGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagc                                                                                                                                                                                  <  2:112794‑M1/251‑74 (MQ=255)                                                                      ggAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctct                                                                                                                                                                               <  1:1380‑M1/251‑77 (MQ=255)                                                                        aaagcgtgcGGGGTGTCCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACCCCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggtgatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagct                                                                                                                                                                                 <  1:71255‑M1/243‑75 (MQ=255)                                                                        aaaaCGTGCTGGGTGTTCCCGCCCGTCGTCAGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTCCCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagct                                                                                                                                                                                 >  2:71255‑M1/1‑173 (MQ=255)                                                                         aaaCGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGAGTCGCAACAACTTCCCCTACCGCTGCAAGTGCCAGGCGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttaagagcgcttttgaagctctgtt                                                                                                                                                                            >  2:230530‑M1/1‑172 (MQ=255)                                                                          aaCGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGCACTGCACTCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttactattctctagaaagtataggaacttcagagtgcttttgaagctctgttc                                                                                                                                                                           >  2:261088‑M1/1‑171 (MQ=255)                                                                             gggcttggcgttcccgcccgCCGTACGCCTCAGTTCGAACTGCCAGTCGTGCGTCGCACCACCTTCCCCTACCGCTGCAAGTGCCAGGAGCACCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGtgggatcttgaaggtcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaac                                                                                                                                                                        <  1:139395‑M1/242‑84 (MQ=255)                                                                             gTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaac                                                                                                                                                                        <  1:382100‑M1/251‑84 (MQ=255)                                                                               gCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacg                                                                                                                                                                       <  1:410526‑M1/250‑85 (MQ=255)                                                                                      gtTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCGACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaac                                                                                                                                                               <  1:438499‑M1/251‑93 (MQ=255)                                                                                      gtTCCCGCCCGTCGTACGAACCAGTTCGAACGGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTAACCGCACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaac                                                                                                                                                               <  2:243107‑M1/251‑93 (MQ=255)                                                                                              ccgTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgt                                                                                                                                                        >  1:399328‑M1/1‑151 (MQ=255)                                                                                                gtcgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatc                                                                                                                                                     >  1:203098‑M1/1‑149 (MQ=255)                                                                                                  cgtACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatcc                                                                                                                                                    <  1:360897‑M1/250‑104 (MQ=255)                                                                                                       gCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttccacgcatggaacaagatgtatccggttac                                                                                                                                              >  2:284472‑M1/1‑142 (MQ=255)                                                                                                           cAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgac                                                                                                                                          <  1:120148‑M1/251‑114 (MQ=255)                                                                                                                 gAACTGCAATCAGTGAGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGCGCATCAGCTTACCGTACGCCGCCATACTCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcctggaacaagatgtatccggttaccgactggg                                                                                                                                      >  2:58442‑M1/1‑132 (MQ=255)                                                                                                                        aaTCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagc                                                                                                                             >  2:135200‑M1/1‑125 (MQ=255)                                                                                                                                   cGCAACACCTTACCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATCATCGAGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgc                                                                                                                  >  2:239353‑M1/1‑114 (MQ=255)                                                                                                                                       acacCTGCCCCTACCGCGGCAAGTGCCAGTGGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCTTCTAGCGCTGTGGTCACTGCGGTGGACAGggggatcttgaaggtcctattccgaagttcctattctctagaaagtataggaacttcagggcgcttttgaatcgctgttcaacgcatggaacaaggtgtatccggttgccgactgggagtgcgagcgcgatgaacgcatcg                                                                                                              <  1:191376‑M1/251‑142 (MQ=255)                                                                                                                                               cccTCCCGCTGCAAGGGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGGAGTGCGTGGCGAGGCCGTCTATCGCTGTTTGCACTGCGGTGAACAGggggatcttgaagttcctattccga                                                                                                                                                                                                                                  <  1:175241‑M1/127‑26 (MQ=255)                                                                                                                                                  tACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgc                                                                                                     >  1:375463‑M1/1‑99 (MQ=255)                                                                                                                                                         gCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatc                                                                                            <  1:59499‑M1/251‑160 (MQ=255)                                                                                                                                                                ccAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataaccc                                                                                     >  1:94796‑M1/1‑85 (MQ=255)                                                                                                                                                                 cAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccg                                                                                    >  1:53583‑M1/1‑84 (MQ=255)                                                                                                                                                                  aGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatggagccggtgaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataaccc                                                                                     <  2:203098‑M1/249‑167 (MQ=255)                                                                                                                                                                  aGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtat                                                                                                                                                                                                           >  2:14361‑M1/1‑83 (MQ=255)                                                                                                                                                                  aGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtat                                                                                                                                                                                                           <  1:14361‑M1/131‑49 (MQ=255)                                                                                                                                                                           ggcTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaac                                                                          <  1:436038‑M1/250‑178 (MQ=255)                                                                                                                                                                                       gccgccATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccagg                                                              >  2:368415‑M1/1‑62 (MQ=255)                                                                                                                                                                                           ccATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgcccggcgcg                                                          >  2:119004‑M1/1‑58 (MQ=255)                                                                                                                                                                                                aTCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaaga                                                     <  2:43300‑M1/251‑199 (MQ=255)                                                                                                                                                                                                        gTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacct                                             <  1:58442‑M1/251‑207 (MQ=255)                                                                                                                                                                                                           cggggcgaGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctaca                                          <  2:399328‑M1/248‑210 (MQ=255)                                                                                                                                                                                                              ggCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacact                                        <  1:221314‑M1/250‑212 (MQ=255)                                                                                                                                                                                                              ggCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacact                                        >  2:411857‑M1/1‑39 (MQ=255)                                                                                                                                                                                                                      cGTCTATCGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggatt                               >  1:240941‑M1/1‑31 (MQ=255)                                                                                                                                                                                                                             cGCTGTGTTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttg                        <  2:407766‑M1/251‑228 (MQ=255)                                                                                                                                                                                                                              gCTGTGTTCACTGTGGTGAACAGggggatcttgaagttcctattccgaagttcctattatctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagctcgatgaacgcatcgcgaaggtgaagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctgtttgt                       <  1:226342‑M1/251‑229 (MQ=255)                                                                                                                                                                                                                                 gtgtTCACTGCGGTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgtgcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgtt                      <  2:204592‑M1/249‑230 (MQ=255)                                                                                                                                                                                                                                          gCGGTGAACAGggggatcttgaagttcctagtccgaagttcctattctctagaaagtatagtgacttcagagcgcttttgaagctctggtcaacgcatggaacaagatgtatccgggtaccgactgggagtgcgagcgcgatgaacgcagcgggagggtgcagggcaatcataacccgtatgtgcaacgtgcttggcgggctcgaaagagctaacctacactagcgggattcgttttgttaacccctaccc           <  2:197559‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                             gTGAACAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgttaacccctaccccac        <  1:268109‑M1/251‑244 (MQ=255)                                                                                                                                                                                                                                               gAACAGggggatcttgaaggtcctattccgaatttcctatcctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgctcttgccaggctcgaaagagctaacctacactagcgggattctgtttgttaactcctaccccacg       <  2:273493‑M1/250‑245 (MQ=255)                                                                                                                                                                                                                                                  cAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgttaacccctaccccgcgcgta   <  1:135200‑M1/251‑249 (MQ=255)                                                                                                                                                                                                                                                  cAGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgttaacccctaccccacgcgt    >  1:6119‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                   aGggggatcttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaagctctgttcaacgcatggaacaagatgtatccggttaccgactgggagtgcgagcgcgatgaacgcatcgcgaaggtgcagggcaatcataacccgtatgtgcaacgcgcttgccaggcgcgaaagagctaacctacactagcgggattctttttgttaacccctaccccacgcgaac  >  2:117771‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                          GGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAACCATCTGAACTATCAGGAACTTTCCTGATCTGGCTGATTGCATACCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTA  >  NC_000913/3089994‑3090486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑