Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,807,520	IS1 (–) +8 bp	coding (572‑579/1035 nt)	waaQ ←	lipopolysaccharide core heptosyltransferase 3

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583428 =	NA (NA)	59 (1.280)	55/476	0.1	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	3807520 =	0 (0.000)					coding (579/1035 nt)	waaQ	lipopolysaccharide core heptosyltransferase 3
*	?	NC_000913	= 3584195	NA (NA)	74 (1.610)	67/476	0.0	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 3807527	0 (0.000)					coding (572/1035 nt)	waaQ	lipopolysaccharide core heptosyltransferase 3

CCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583676‑3583428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTGAAGCTTTTTTTCCAAAT  >  NC_000913/3807520‑3807765                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAG                                                                                                                                                                                                                                                      <  1:271738/251‑1            CATGGCCATATCAATGATTGTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCTCCAGAAAATTTATC                                                                                                                                                                                                                                            <  2:383237/250‑1               GGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTT                                                                                                                                                                                                                                         <  2:462382/250‑1                        AATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGCACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACAC                                                                                                                                                                                                                               >  2:426104/1‑251                         ATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACT                                                                                                                                                                                                                              >  1:441021/1‑251                               TTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGCTGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAAAATTTATCGTTATCCCAACACTTAAAT                                                                                                                                                                                                                         >  2:29020/1‑250                                TCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCGCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCAGCACCAGAAAATTTATCGTTAGCCCAACACTTAAATA                                                                                                                                                                                                                        <  2:393157/250‑1                                 CTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGGGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATC                                                                                                                                                                                                                      >  2:224544/1‑251                                   GGTGCGTACCGGGTTGGTAAGCGGTGGAAGTGAACTGCAGTTGCCAGGTTTTACGGCAGTGAGAGCAGAGCTCGCGCGGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCAGAAAATTTATCGTTATCCTAACACTTAAATATCT                                                                                                                                                                                                                     <  2:119748/250‑1                                   GGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATAT                                                                                                                                                                                                                       <  1:460583/248‑1                                   GGTGCGTACCGGGTTGAGAAGCGGTGGAAGGGAACAGCAGGTGCAATGTTGTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCT                                                                                                                                                                                                                     <  2:204729/250‑1                                    GTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCATCAGAAAATTTATCGTTATCCCAGCACTTAAATATCTGA                                                                                                                                                                                                                   <  1:69592/251‑1                                        GTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCG                                                                                                                                                                                                               >  2:197981/1‑251                                          ACCGGGTTGAGAAGCGGTGTAAGTGAACTGCATGTGCCATGGTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCGTTTGCCGTGACGCACCACCCCGTCAGTAGCGGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACGAAATCAGTAAGTGGGCAGCATCACCAGAAAATTTATCGTAATCCCAACACTTAAATATCTGACGCGCT                                                                                                                                                                                                             <  2:164016/251‑1                                           CCGGGTTGAGAAGCGGTGTAAGTGAACGGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCGCTGGAGCCCCTCAAAAACACCATCATGCACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTG                                                                                                                                                                                                            <  2:239579/251‑1                                                       GCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACG                                                                                                                                                                                                                 >  1:67878/1‑234                                                       GCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACG                                                                                                                                                                                                                 <  2:67878/234‑1                                                         GGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGAATGACA                                                                                                                                                                                              <  1:130997/251‑1                                                             TAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACAT                                                                                                                                                                                          >  2:413817/1‑251                                                              AAGTGATCTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACAT                                                                                                                                                                                          >  1:136510/1‑250                                                                    ACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTTGGTTGGATGACAACATAATGATC                                                                                                                                                                                   <  2:31956/251‑1                                                                          GTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTAC                                                                                                                                                                             <  1:426104/251‑1                                                                             GCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCGTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGC                                                                                                                                                                           <  1:197981/250‑1                                                                                         GGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTA                                                                                                                                                               >  2:260794/1‑250                                                                                           CAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGCTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGCCAACATAATGATCTTTTACGCCCAGGGCATCTAATT                                                                                                                                                            >  2:54597/1‑251                                                                                                 GAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGTAGCACCTCAAAAACACCATCAGACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAAGGATCTTTTACGCCCAGGGCATCTAATTCCCGGC                                                                                                                                                      <  1:216087/251‑1                                                                                                    CAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGC                                                                                                                                                    >  1:348881/1‑250                                                                                                         ATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTC                                                                                                                                              <  2:353098/251‑1                                                                                                          aAGCGCTGATGTCCGGAGGTGCTGTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTAGCCCAACACTTAAATATCTGACGCGCTGTCGGTGGGATGACAACATAATGATCTGTTACGCCCAGGGCATCTAGTTCCCGGCGCATCTTCT                                                                                                                                             <  2:207899/250‑1                                                                                                                   TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAAT                                                                                                                                    >  2:246193/1‑251                                                                                                                      CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGCAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTT                                                                                                                                 >  1:455665/1‑251                                                                                                                          CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGC                                                                                                                             <  1:245415/251‑1                                                                                                                                  TTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTC                                                                                                                      >  1:159187/1‑250                                                                                                                                          ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTG                                                                                                             <  2:77936/251‑1                                                                                                                                            GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTC                                                                                                           <  1:194919/251‑1                                                                                                                                               CCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCCCTGGAGCACCTCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGCCAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGT                                                                                                        >  2:191693/1‑251                                                                                                                                                                GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAAT                                                                                         <  1:260794/249‑1                                                                                                                                                                   CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAACTCGGTACTACCT                                                                                     >  2:442878/1‑250                                                                                                                                                                    AGGAGGGACAGCTGATAGAACCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTg                                                                                    >  2:447330/1‑249                                                                                                                                                                    AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGCTGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTA                                                                                    >  1:107876/1‑250                                                                                                                                                                      GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATG                                                                                 <  1:376615/251‑1                                                                                                                                                                                 GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTGATCGTTATCCCAACACTTAAATATCTGACGCGCTGGCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTGCCAGCAATCTTCGTCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGAC                                                                       <  2:229093/250‑1                                                                                                                                                                                  ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCG                                                                     <  1:224544/251‑1                                                                                                                                                                                       AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAA                                                                <  1:413817/251‑1                                                                                                                                                                                                    GGAGCACCTCAAAAACACCATCATACACTAAATCCGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTTTCCCAACACTTAAATATCTGTCGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCTTCGTCTTCGAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTTTAGAAATCGGTTATACCTAATGGCTCTAGGACCGATAAATTACGCTCAAC                                                     <  1:306250/249‑1                                                                                                                                                                                                    GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAAC                                                     <  1:67254/249‑1                                                                                                                                                                                                         ACCTCAAAAACTCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTAACCCAACACTGAAATATCTGACGCTCTGTCGGTTGGATGACAACATAATGATCTGTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGT                                              <  2:107876/251‑1                                                                                                                                                                                                             CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGT                                            <  1:191693/249‑1                                                                                                                                                                                                                         CATACACTAAATCAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGC                               <  1:29020/250‑1                                                                                                                                                                                                                                     CAGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTG                   <  2:441021/250‑1                                                                                                                                                                                                                                      AGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCT                                                                                                                                  >  1:277087/1‑138                                                                                                                                                                                                                                      AGTAAGTTGGCAGCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCT                                                                                                                                  <  2:277087/138‑1                                                                                                                                                                                                                                      AGTAAGTTGGCAGCATCACCAGAAAATGTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTGAA                 <  1:462232/251‑1                                                                                                                                                                                                                                         AAGTTGGCAGCATCCCCAGAAAATTTATCGTTATCCCAACACTTACATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGACCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCACGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTGAAGCT              >  1:83713/1‑251                                                                                                                                                                                                                                                  GCATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTGAAGCTTTTTTTCCA     <  2:348881/251‑1                                                                                                                                                                                                                                                   CATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTGAAGCTTTTTTTCCA     >  2:114893/1‑250                                                                                                                                                                                                                                                   CATCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGGGTCGGTGTAGAAAT                                                                                                <  2:378774/159‑1                                                                                                                                                                                                                                                   CATCACAAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAAT                                                                                                >  1:378774/1‑159                                                                                                                                                                                                                                                     TCACCAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTGAAGCTTTTTTTCCAAAT  >  2:76228/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583676‑3583428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAATTACGCTCAACAATATGTGTACCGTGTATTGGCGCTAAGTGTGTGAAGCTTTTTTTCCAAAT  >  NC_000913/3807520‑3807765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.