National BioResource Project (NBRP)::KOMUGI -Integrated Wheat Science Database- : Genome / Development

Gene symbol	Class				Synonyms	Chromosomes	Germplasms
Gene symbol	Level1	Level2	Level3	Level4	Synonyms	Chromosomes	Germplasms
S-A1	Gross Morphology: Spike characteristics	Sphaerococcum				3A	v:CS
S-A1	Comment:
S-A1a	Gross Morphology: Spike characteristics	Sphaerococcum					v:CS,v:common wheats
S-A1a	Comment:
S-A1b	Gross Morphology: Spike characteristics	Sphaerococcum			S3		v:MS 1453,ma:Xgwm2-3A(S) - 5.1 cM - S-A1 - 6.6 cM - Xgwm720-3A(L)
S-A1b	Comment:
S-B1	Gross Morphology: Spike characteristics	Sphaerococcum				3B	v:CS
S-B1	Comment:
S-B1a	Gross Morphology: Spike characteristics	Sphaerococcum					v:CS,v:common wheats
S-B1a	Comment:
S-B1b	Gross Morphology: Spike characteristics	Sphaerococcum			S2,s¹⁶²¹⁹		v:MSK 2452,v:MSK 2454,tv:MA 16219,ma:Xgwm685-3B(S) - 4.2 cM - S-B1 - 0.5 cM - Xgwm566/Xgwm845/cent
S-B1b	Comment:
S-D1	Gross Morphology: Spike characteristics	Sphaerococcum				3D,3DS,3DL	v:CS
S-D1	Comment:
S-D1a	Gross Morphology: Spike characteristics	Sphaerococcum					v:CS,v:common wheats
S-D1a	Comment:
S-D1b	Gross Morphology: Spike characteristics	Sphaerococcum			s1, sp1		i:S-615^11/T. sphaerococcum* var. rotundatum,s:CS^7/T. sphaerococcum rubiginosum* 3D,v:Sphaerococcum wheats,v:T. antiquorum K056397 & K56398
S-D1b	Comment:
S-D1c	Gross Morphology: Spike characteristics	Sphaerococcum			S1		v:MS 3287,ma:Xgdm72-3D(S) - 8.0 cM - S-D1 - 2.9 cM - Xgwm456-3D/cent
S-D1c	Comment:
SBWMV	Reaction to Soil-Borne Cereal Mosaic Virus					5D	v:KS96WGRC40,dv:Ae. tauschii TA2397,ma:Xcfd010-5DL - 9.5 cM - SBWMV - 11.1 cM - Xbarc144-5D
SBWMV	Comment: The relationship of this gene to Sbm1 is not known.
Sa1	Reaction to Sitobion avenae				RA-1	6AL	tv:C273,ma:Xwmc179-6A - 3.37 cM - Sa1 - 4.73 cM - Xwmc580-6A
Sa1	Comment:
Sb1	Reaction to Bipolaris sorokiniana					7DS	i:HUW234Ltn+,v:Saar,v:Lines with Lr34/Yr18/Pm38/Sr57 - see Reaction to Puccinia triticina, Reaction to Puccinia striiformis, Reaction to Blumeria graminis, Reaction to Puccinia graminis, Leaf tip necrosis.,ma:Pleiotropic or closely linked with Lr34/Yr18/Pm38/Sr57 located between Xgwm1220-7DS and Xswm10-7DS (1.0 cM interval),ma:see also Reaction to Puccinia triticina, Reaction to Puccinia striiformis, Reaction to Puccinia graminis and Reaction to Blumeria graminis,c:Putative ABC transporter
Sb1	Comment: Partial resistance
SbeI1	Proteins	Enzymes	Starch branching enzyme I			1DL	v:CS
SbeI1	Comment:
SbeI2	Proteins	Enzymes	Starch branching enzyme I			7BL	v:CS
SbeI2	Comment:
SbeII	Proteins	Enzymes	Starch branching enzyme II
SbeII	Comment: Suppression of SBEIIb expression alone had no effect on amylose contents, however, suppression of both SBEIIa and SBEIIb expression resulted in wheat starch containing >70% amylose {10534}. Combined loss-of-function mutations in SbeIIa-A, SbeIIa-B, SbeIIb-A, and SbeIIb-B (PI 670160) increased amylose content by 66% and resistant starch by 753% relative to the control in tetraploid wheat cv. Kronos {11125}. Combination of these four mutations with mutations of SbeIIa-D in hexaploid wheat (PI 670160) increased amylose content by 63% and resistant starch by 1,057% in field experiments relative to the control {11126}
Sbm1	Reaction to Soil-Borne Cereal Mosaic Virus				SbmCz1	5DL	v:Cadenza,v:Claire,v:Moulin,v:Tonic,v:Tremie,ma:Xbarc110-5D - 14.7 cM - Sbm1 - 2.1 cM - Xwmc765-5D - 3.1 cM - Xbarc144-5D/Xwmc443-5D/RRES01-5D,ma:Caps marker RRESO1 was developed from an AFLP fragment,ma:E37M49 ? 9.0 cM ? Sbm1 ? 1.0 cM ? Xgwm469-5D ? 2.0 cM ? Xwmc765-5D. Resistant varieties carried 152 or 154 bp alleles at Xgwm469-5D,ma:all susceptible genotypes had a null allele
Sbm1	Comment: Sbm1 was identified in a DH population of Avalon (susceptible)/Cadenza {10132}.
SbmTmr1	Reaction to Soil-Borne Cereal Mosaic Virus					5D	v:TAM 107-R7
SbmTmr1	Comment:
Sd1	Gametocidal Genes	Gametocidal activity				7D	v2:Agatha Sd2,ma:Proximal to Lr19 and distal to Xpsr165-7D
Sd1	Comment:
Sd2	Gametocidal Genes	Gametocidal activity				7BL	v:88M22-149
Sd2	Comment: Zhang et al. {10255} question the existence of this gene and alternatively suggest a duplication or deletion event influencing the transmission.
Sgp-A1	Proteins	Other proteins	Starch granule proteins			7AS	v:CS
Sgp-A1	Comment:
Sgp-A1a	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-A1a	Comment:
Sgp-A1b	Proteins	Other proteins	Starch granule proteins			Null allele	v:Chosen 30, Chosen 57
Sgp-A1b	Comment:
Sgp-A1c	Proteins	Other proteins	Starch granule proteins				v:Hua Non 9
Sgp-A1c	Comment:
Sgp-A2	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-A2	Comment:
Sgp-A3	Proteins	Other proteins	Starch granule proteins			7AS	v:CS
Sgp-A3	Comment:
Sgp-A3a	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-A3a	Comment:
Sgp-A3b	Proteins	Other proteins	Starch granule proteins			Null allele	v:Norin 61
Sgp-A3b	Comment:
Sgp-B1	Proteins	Other proteins	Starch granule proteins			7BS	v:CS
Sgp-B1	Comment:
Sgp-B1a	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-B1a	Comment:
Sgp-B1b	Proteins	Other proteins	Starch granule proteins			Null allele	v:K79
Sgp-B1b	Comment:
Sgp-B1c	Proteins	Other proteins	Starch granule proteins				v:Gnatruche
Sgp-B1c	Comment:
Sgp-B1d	Proteins	Other proteins	Starch granule proteins				v:Waratah
Sgp-B1d	Comment:
Sgp-B2	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-B2	Comment:
Sgp-B3	Proteins	Other proteins	Starch granule proteins			7BS	v:CS
Sgp-B3	Comment:
Sgp-B3a	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-B3a	Comment:
Sgp-B3b	Proteins	Other proteins	Starch granule proteins			Null allele	v:Crest
Sgp-B3b	Comment:
Sgp-B3c	Proteins	Other proteins	Starch granule proteins				v:Spica
Sgp-B3c	Comment:
Sgp-D1	Proteins	Other proteins	Starch granule proteins			7DS	v:CS
Sgp-D1	Comment:
Sgp-D1a	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-D1a	Comment:
Sgp-D1b	Proteins	Other proteins	Starch granule proteins			Null allele	v:T116
Sgp-D1b	Comment:
Sgp-D2	Proteins	Other proteins	Starch granule proteins				v:CS
Sgp-D2	Comment:
Sgp-D3	Proteins	Other proteins	Starch granule proteins			7DS	v:CS
Sgp-D3	Comment: The proteins, designated SGP-3, are identical to wheat starch synthase I, encoded by SsI-A1, SsI-A2 and SsI-D1 {0041}.
Shw	Male Sterility	Sterility in hybrids with wheat			1HL		ad:Additions of 1H and 1HL to wheat and certain translocation lines,ma:Located in a 16.4 cM interval flanked by Xmwg800-1H and Xmwg943-1H. A possible relationship with Ncc genes is discussed
Shw	Comment:
Si-B2	Proteins	Enzyme Inhibitors	Subtilisin inhibition			1BS	su:Bersee (Koga II)
Si-B2	Comment:
Si-D2	Proteins	Enzyme Inhibitors	Subtilisin inhibition			1DS	v:Koga II
Si-D2	Comment:
Si-H1	Proteins	Enzyme Inhibitors	Subtilisin inhibition		Isa 1	2H	ad:CS/Betzes
Si-H1	Comment:
Si-H2	Proteins	Enzyme Inhibitors	Subtilisin inhibition		Ica 1,Ica 2	1H	ad:CS/Betzes
Si-H2	Comment:
Si-R1	Proteins	Enzyme Inhibitors	Subtilisin inhibition			2R,2RS	ad:CS/Imperial, Holdfast/King II
Si-R1	Comment:
Si-R2	Proteins	Enzyme Inhibitors	Subtilisin inhibition			1R,1RS	ad:CS/Imperial,tr:Gabo 1BL.1RS
Si-R2	Comment: