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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig List

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Hit Count : 1761
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Contig Registered year Tissue Sequence Clone Homology (BLAST )
Top hit (Definition) Score E-Value
rwhsc9o16
( singlet )
2003 Shoot grown with cold treatment   135 bp 1 Clones eukaryotic translation initiation factor 5A1 [Triticum aestivum] >gi|78191541|gb|ABB29983.1| translation initiation factor 5A [Dasypyrum breviaristatum] >gi|78191543|gb|ABB29984.1| translation initiation factor 5A [Secale cereale] >gi|78191547|gb|ABB29986.1| translation initiation factor 5A [Aegilops tauschii] 792 2.8837e-82
whsc1a21
( singlet )
2003 Shoot grown with cold treatment   529 bp 1 Clones hypothetical protein OsJ_026823 [Oryza sativa (japonica cultivar-group)] 413 4.83065e-39
whsc1a11
( singlet )
2003 Shoot grown with cold treatment   664 bp 1 Clones hypothetical protein OsJ_008325 [Oryza sativa (japonica cultivar-group)] 795 4.46052e-83
rwhsc9o17
( singlet )
2003 Shoot grown with cold treatment   208 bp 1 Clones unnamed protein product [Oryza sativa Japonica Group] 166 1.68474e-10
whsc1b07
( singlet )
2003 Shoot grown with cold treatment   727 bp 1 Clones hypothetical protein OsI_24244 [Oryza sativa Indica Group] 1107 3.5906e-119
rwhsc9o22
( singlet )
2003 Shoot grown with cold treatment   123 bp 1 Clones RecName: Full=Gamma-2-purothionin >gi|100844|pir||S11530 purothionin gamma - poulard wheat >gi|227203|prf||1616227B purothionin gamma2 111 0.0
rwhsc9n14
( singlet )
2003 Shoot grown with cold treatment   132 bp 1 Clones hypothetical protein OsI_31594 [Oryza sativa Indica Group] 135 6.6169e-07
rwhsc9o06
( singlet )
2003 Shoot grown with cold treatment   647 bp 1 Clones unnamed protein product [Oryza sativa Japonica Group] 451 3.28053e-43
whsc1b19
( singlet )
2003 Shoot grown with cold treatment   220 bp 1 Clones transmembrane 9 superfamily protein member 2 precursor [Zea mays] 332 9.37532e-30
whsc1b10
( singlet )
2003 Shoot grown with cold treatment   407 bp 1 Clones transposon protein CACTA, En/Spm sub-class [Zea mays] 128 4.30921e-06
whsc1b24
( singlet )
2003 Shoot grown with cold treatment   146 bp 1 Clones unnamed protein product [Oryza sativa Japonica Group] >gi|218192269|gb|EEC74696.1| hypothetical protein OsI_10403 [Oryza sativa Indica Group] 104 0.0
whsc1c03
( singlet )
2003 Shoot grown with cold treatment   170 bp 1 Clones benzoxazin6 [Zea mays] >gi|29123084|gb|AAO65850.1| 2-oxoglutarate-dependent oxygenase [Zea mays] >gi|194703630|gb|ACF85899.1| unknown [Zea mays] >gi|195622068|gb|ACG32864.1| 1-aminocyclopropane-1-carboxylate oxidase [Zea mays] 73 0.0
whsc1c08
( singlet )
2003 Shoot grown with cold treatment   126 bp 1 Clones hypothetical protein OsI_31924 [Oryza sativa Indica Group] 130 2.52979e-06
rwhsc9m20
( singlet )
2003 Shoot grown with cold treatment   409 bp 1 Clones hypothetical protein OsI_07847 [Oryza sativa Indica Group] 340 1.12153e-30
rwhsc9n16
( singlet )
2003 Shoot grown with cold treatment   177 bp 1 Clones putative NPSN12 [Oryza sativa Japonica Group] >gi|53829383|gb|AAU94635.1| SNARE 11 [Oryza sativa Japonica Group] >gi|215765095|dbj|BAG86792.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218198884|gb|EEC81311.1| hypothetical protein OsI_24460 [Oryza sativa Indica Group] 184 1.3683e-12
whsc1c20
( singlet )
2003 Shoot grown with cold treatment   134 bp 1 Clones putative UDP-glucose dehydrogenase [Sorghum bicolor] 200 1.91489e-14
whsc1d02
( singlet )
2003 Shoot grown with cold treatment   555 bp 1 Clones hypothetical protein OsJ_027849 [Oryza sativa (japonica cultivar-group)] 316 9.89651e-28
whsc1d11
( singlet )
2003 Shoot grown with cold treatment   429 bp 1 Clones GJ19212 [Drosophila virilis] >gi|194149660|gb|EDW65351.1| GJ19212 [Drosophila virilis] 78 2.7
whsc1a05
( singlet )
2003 Shoot grown with cold treatment   111 bp 1 Clones Os08g0389500 [Oryza sativa (japonica cultivar-group)] >gi|113623687|dbj|BAF23632.1| Os08g0389500 [Oryza sativa (japonica cultivar-group)] 95 0.0
rwhsc9m17
( singlet )
2003 Shoot grown with cold treatment   747 bp 1 Clones hypothetical protein OsJ_024646 [Oryza sativa (japonica cultivar-group)] 741 1.0378e-76
whsc1d16
( singlet )
2003 Shoot grown with cold treatment   336 bp 1 Clones putative cytosolic aldehyde dehydrogenase [Oryza sativa Japonica Group] >gi|125597735|gb|EAZ37515.1| hypothetical protein OsJ_020998 [Oryza sativa (japonica cultivar-group)] 344 3.84299e-31
rwhsc9m16
( singlet )
2003 Shoot grown with cold treatment   743 bp 1 Clones hypothetical protein OsI_27366 [Oryza sativa Indica Group] 589 4.3635e-59
whsc1d18
( singlet )
2003 Shoot grown with cold treatment   507 bp 1 Clones putative phospholipase D alpha 1 precursor [Triticum urartu] 857 1.39483e-90
rwhsc9n11
( singlet )
2003 Shoot grown with cold treatment   708 bp 1 Clones Os04g0534400 [Oryza sativa (japonica cultivar-group)] >gi|113564987|dbj|BAF15330.1| Os04g0534400 [Oryza sativa (japonica cultivar-group)] >gi|116310461|emb|CAH67465.1| OSIGBa0159I10.10 [Oryza sativa (indica cultivar-group)] >gi|215701032|dbj|BAG92456.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218195276|gb|EEC77703.1| hypothetical protein OsI_16778 [Oryza sativa Indica Group] 264 1.89808e-21
rwhsc9m09
( singlet )
2003 Shoot grown with cold treatment   134 bp 1 Clones elongation factor 1-alpha [Secale cereale] 171 4.41455e-11
whsc1a04
( singlet )
2003 Shoot grown with cold treatment   283 bp 1 Clones retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] >gi|77548920|gb|ABA91717.1| retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] 176 1.15145e-11
whsc1e09
( singlet )
2003 Shoot grown with cold treatment   281 bp 1 Clones hypothetical protein OsI_19876 [Oryza sativa Indica Group] 412 4.97769e-39
rwhsc3g12
( singlet )
2003 Shoot grown with cold treatment   430 bp 1 Clones histone H2B.2 [Zea mays] 348 1.33466e-31
whsc1e12
( singlet )
2003 Shoot grown with cold treatment   803 bp 1 Clones N-acetylgalactosamine 6-sulfatase (GALNS) [Lentisphaera araneosa HTCC2155] >gi|149140314|gb|EDM28713.1| N-acetylgalactosamine 6-sulfatase (GALNS) [Lentisphaera araneosa HTCC2155] 81 4.0
rwhsc9m07
( singlet )
2003 Shoot grown with cold treatment   281 bp 1 Clones glutathione-S-transferase, I subunit [Hordeum vulgare subsp. vulgare] 341 8.51038e-31
rwhsc16g18
( singlet )
2003 Shoot grown with cold treatment   728 bp 1 Clones Os03g0209500 [Oryza sativa (japonica cultivar-group)] >gi|108706783|gb|ABF94578.1| zinc finger family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113547806|dbj|BAF11249.1| Os03g0209500 [Oryza sativa (japonica cultivar-group)] >gi|215768485|dbj|BAH00714.1| unnamed protein product [Oryza sativa Japonica Group] 614 5.26968e-62
whsc14p18
( singlet )
2003 Shoot grown with cold treatment   669 bp 1 Clones hypothetical protein OsI_35968 [Oryza sativa Indica Group] 1005 2.0102e-107
whsc1e22
( singlet )
2003 Shoot grown with cold treatment   725 bp 1 Clones expressed protein [Oryza sativa (japonica cultivar-group)] 646 1.01682e-65
rwhsc9l20
( singlet )
2003 Shoot grown with cold treatment   711 bp 1 Clones Os07g0124600 [Oryza sativa (japonica cultivar-group)] >gi|28201305|dbj|BAC56813.1| putative Heterogeneous nuclear ribonucleoprotein [Oryza sativa Japonica Group] >gi|113610341|dbj|BAF20719.1| Os07g0124600 [Oryza sativa (japonica cultivar-group)] >gi|125557092|gb|EAZ02628.1| hypothetical protein OsI_24740 [Oryza sativa Indica Group] >gi|125598981|gb|EAZ38557.1| hypothetical protein OsJ_022040 [Oryza sativa (japonica cultivar-group)] 166 8.26662e-14
rwhsc3h11
( singlet )
2003 Shoot grown with cold treatment   721 bp 1 Clones hypothetical protein OsI_31754 [Oryza sativa Indica Group] 90 0.2
rwhsc3h12
( singlet )
2003 Shoot grown with cold treatment   828 bp 1 Clones hypothetical protein OsI_08032 [Oryza sativa Indica Group] 846 8.42884e-89
whsc1f05
( singlet )
2003 Shoot grown with cold treatment   140 bp 1 Clones hypothetical protein OsI_08032 [Oryza sativa Indica Group] 846 8.42884e-89
whsc1f09
( singlet )
2003 Shoot grown with cold treatment   628 bp 1 Clones hypothetical protein OsJ_009251 [Oryza sativa (japonica cultivar-group)] 453 1.78905e-43
whsc1f16
( singlet )
2003 Shoot grown with cold treatment   611 bp 1 Clones hypothetical protein OsI_09342 [Oryza sativa Indica Group] 954 1.35624e-101
whsc1f17
( singlet )
2003 Shoot grown with cold treatment   534 bp 1 Clones hypothetical protein LOC100193785 [Zea mays] >gi|194694130|gb|ACF81149.1| unknown [Zea mays] 563 2.07166e-56
whsc1f19
( singlet )
2003 Shoot grown with cold treatment   670 bp 1 Clones hypothetical protein LOC100193785 [Zea mays] >gi|194694130|gb|ACF81149.1| unknown [Zea mays] 563 2.07166e-56
whsc1g08
( singlet )
2003 Shoot grown with cold treatment   497 bp 1 Clones glycosyl transferase, group 2 family protein [Roseobacter sp. MED193] >gi|85825531|gb|EAQ45730.1| glycosyl transferase, group 2 family protein [Roseobacter sp. MED193] 79 2.1
whsc15a01
( singlet )
2003 Shoot grown with cold treatment   684 bp 1 Clones hypothetical protein OsJ_023051 [Oryza sativa (japonica cultivar-group)] 381 4.82124e-35
whsc15a04
( singlet )
2003 Shoot grown with cold treatment   664 bp 1 Clones T-complex protein 1 subunit beta [Zea mays] 1071 4.41933e-115
rwhsc3g03
( singlet )
2003 Shoot grown with cold treatment   824 bp 1 Clones hypothetical protein OsJ_015592 [Oryza sativa (japonica cultivar-group)] 910 3.15084e-96
rwhsc9l19
( singlet )
2003 Shoot grown with cold treatment   681 bp 1 Clones transmembrane 9 superfamily protein member 1 precursor [Zea mays] 435 2.61217e-41
whsc1h13
( singlet )
2003 Shoot grown with cold treatment   116 bp 1 Clones hypothetical protein LOC100217003 [Zea mays] >gi|194697358|gb|ACF82763.1| unknown [Zea mays] 155 3.22187e-09
rwhsc3f17
( singlet )
2003 Shoot grown with cold treatment   814 bp 1 Clones hypothetical protein OsI_35523 [Oryza sativa Indica Group] 799 2.2923e-83
rwhsc3f15
( singlet )
2003 Shoot grown with cold treatment   335 bp 1 Clones extensin [Hordeum vulgare] 113 0.0
rwhsc3h15
( singlet )
2003 Shoot grown with cold treatment   857 bp 1 Clones hypothetical protein OsJ_008102 [Oryza sativa (japonica cultivar-group)] 901 3.75544e-95
rwhsc9i01
( singlet )
2003 Shoot grown with cold treatment   145 bp 1 Clones hypothetical protein OsJ_004969 [Oryza sativa (japonica cultivar-group)] 139 2.3328e-07
whsc1h23
( singlet )
2003 Shoot grown with cold treatment   757 bp 1 Clones hypothetical protein OsI_03962 [Oryza sativa Indica Group] 1061 8.33661e-114
rwhsc16g12
( singlet )
2003 Shoot grown with cold treatment   217 bp 1 Clones hypothetical protein OsI_03962 [Oryza sativa Indica Group] 1061 8.33661e-114
rwhsc3f10
( singlet )
2003 Shoot grown with cold treatment   172 bp 1 Clones hypothetical protein OsI_03962 [Oryza sativa Indica Group] 1061 8.33661e-114
whsc1i02
( singlet )
2003 Shoot grown with cold treatment   285 bp 1 Clones hypothetical protein OsI_34122 [Oryza sativa Indica Group] 372 2.22837e-34
whsc1i05
( singlet )
2003 Shoot grown with cold treatment   682 bp 1 Clones Os02g0137500 [Oryza sativa (japonica cultivar-group)] >gi|122064234|sp|Q6YXY2|HACL1_ORYSJ RecName: Full=Probable histone acetyltransferase HAC-like 1 >gi|113535361|dbj|BAF07744.1| Os02g0137500 [Oryza sativa (japonica cultivar-group)] 222 1.31905e-16
rwhsc9h23
( singlet )
2003 Shoot grown with cold treatment   181 bp 1 Clones benzoxazin6 [Zea mays] >gi|29123084|gb|AAO65850.1| 2-oxoglutarate-dependent oxygenase [Zea mays] >gi|194703630|gb|ACF85899.1| unknown [Zea mays] >gi|195622068|gb|ACG32864.1| 1-aminocyclopropane-1-carboxylate oxidase [Zea mays] 80 1.5
rwhsc9h21
( singlet )
2003 Shoot grown with cold treatment   672 bp 1 Clones hypothetical protein OsJ_017556 [Oryza sativa (japonica cultivar-group)] 790 1.73225e-82
rwhsc3f11
( singlet )
2003 Shoot grown with cold treatment   718 bp 1 Clones SC3 protein [Zea mays] 797 3.08903e-83
rwhsc9h04
( singlet )
2003 Shoot grown with cold treatment   200 bp 1 Clones hypothetical protein OsI_32911 [Oryza sativa Indica Group] 144 6.0315e-08
rwhsc16g10
( singlet )
2003 Shoot grown with cold treatment   729 bp 1 Clones Os12g0502300 [Oryza sativa (japonica cultivar-group)] >gi|122248577|sp|Q2QQ96|CCA21_ORYSJ RecName: Full=Cyclin-A2-1; AltName: Full=G2/mitotic-specific cyclin-A2-1; Short=CycA2;1 >gi|77555843|gb|ABA98639.1| Cyclin, N-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] >gi|113649335|dbj|BAF29847.1| Os12g0502300 [Oryza sativa (japonica cultivar-group)] 684 4.06177e-70
rwhsc9g14
( singlet )
2003 Shoot grown with cold treatment   135 bp 1 Clones calcium-dependent protein kinase [Triticum aestivum] >gi|164472652|gb|ABY59008.1| calcium-dependent protein kinase [Triticum aestivum] 149 1.57012e-08
rwhsc9g13
( singlet )
2003 Shoot grown with cold treatment   775 bp 1 Clones calcium-dependent protein kinase [Triticum aestivum] >gi|164472652|gb|ABY59008.1| calcium-dependent protein kinase [Triticum aestivum] 933 6.09013e-99
rwhsc16g07
( singlet )
2003 Shoot grown with cold treatmen