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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig List

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Hit Count : 1685
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Contig Registered year Tissue Sequence Clone Homology (BLAST )
Top hit (Definition) Score E-Value
rwhei20o18
( singlet )
2003 Dormant seed with water absorption after breaking   741 bp 1 Clones hypothetical protein OsJ_010432 [Oryza sativa (japonica cultivar-group)] 900 3.74597e-95
whei1b22
( singlet )
2003 Dormant seed with water absorption after breaking   540 bp 1 Clones hypothetical protein OsI_36708 [Oryza sativa Indica Group] 81 6.16598e-05
whei1c09
( singlet )
2003 Dormant seed with water absorption after breaking   596 bp 1 Clones hypothetical protein OsJ_008270 [Oryza sativa (japonica cultivar-group)] 916 3.22646e-97
rwhei20o19
( singlet )
2003 Dormant seed with water absorption after breaking   814 bp 1 Clones ribosome biogenesis protein NEP1 [Zea mays] 1089 5.40568e-117
whei1b02
( singlet )
2003 Dormant seed with water absorption after breaking   281 bp 1 Clones asparagine synthetase 2 [Hordeum vulgare] 397 2.73135e-37
whei1b09
( singlet )
2003 Dormant seed with water absorption after breaking   359 bp 1 Clones hypothetical protein BRAFLDRAFT_87096 [Branchiostoma floridae] >gi|210107804|gb|EEA55727.1| hypothetical protein BRAFLDRAFT_87096 [Branchiostoma floridae] 85 0.4
whei1c12
( singlet )
2003 Dormant seed with water absorption after breaking   460 bp 1 Clones hypothetical protein OsI_19641 [Oryza sativa Indica Group] 610 5.47032e-62
whei1a12
( singlet )
2003 Dormant seed with water absorption after breaking   108 bp 1 Clones ribosomal protein L13a [Triticum aestivum] 79 2.1
rwhei20n17
( singlet )
2003 Dormant seed with water absorption after breaking   701 bp 1 Clones Os10g0389500 [Oryza sativa (japonica cultivar-group)] >gi|78708513|gb|ABB47488.1| expressed protein [Oryza sativa (japonica cultivar-group)] >gi|113639110|dbj|BAF26415.1| Os10g0389500 [Oryza sativa (japonica cultivar-group)] >gi|189473500|gb|ACD99649.1| unknown protein [Oryza sativa Indica Group] >gi|215694613|dbj|BAG89804.1| unnamed protein product [Oryza sativa Japonica Group] 249 1.02148e-19
rwhei20n05
( singlet )
2003 Dormant seed with water absorption after breaking   764 bp 1 Clones Os01g0967800 [Oryza sativa (japonica cultivar-group)] >gi|113535043|dbj|BAF07426.1| Os01g0967800 [Oryza sativa (japonica cultivar-group)] 371 8.67442e-34
rwhei20n04
( singlet )
2003 Dormant seed with water absorption after breaking   725 bp 1 Clones hypothetical protein OsI_05632 [Oryza sativa Indica Group] 84 1.4
whei1d14
( singlet )
2003 Dormant seed with water absorption after breaking   629 bp 1 Clones Hypothetical protein CBG19530 [Caenorhabditis briggsae] 92 0.1
whei1a21
( singlet )
2003 Dormant seed with water absorption after breaking   536 bp 1 Clones multi-sensor signal transduction histidine kinase [Magnetococcus sp. MC-1] >gi|117609978|gb|ABK45433.1| multi-sensor signal transduction histidine kinase [Magnetococcus sp. MC-1] 77 4.6
whei1d20
( singlet )
2003 Dormant seed with water absorption after breaking   643 bp 1 Clones unknown [Zea mays] 728 2.45968e-75
whei1d22
( singlet )
2003 Dormant seed with water absorption after breaking   322 bp 1 Clones hypothetical protein OsJ_013541 [Oryza sativa (japonica cultivar-group)] 406 2.52266e-38
whei1e01
( singlet )
2003 Dormant seed with water absorption after breaking   565 bp 1 Clones hypothetical protein OsJ_013541 [Oryza sativa (japonica cultivar-group)] 406 2.52266e-38
whei1b12
( singlet )
2003 Dormant seed with water absorption after breaking   505 bp 1 Clones RecName: Full=Cellulose synthase-like protein D2; AltName: Full=OsCslD2 >gi|125561155|gb|EAZ06603.1| hypothetical protein OsI_28847 [Oryza sativa Indica Group] 754 1.19628e-78
whei1e05
( singlet )
2003 Dormant seed with water absorption after breaking   571 bp 1 Clones hypothetical protein ECSE_2792 [Escherichia coli SE11] >gi|209913242|dbj|BAG78316.1| conserved hypothetical protein [Escherichia coli SE11] 84 0.8
rwhei20n01
( singlet )
2003 Dormant seed with water absorption after breaking   742 bp 1 Clones Os06g0687700 [Oryza sativa (japonica cultivar-group)] >gi|113596449|dbj|BAF20323.1| Os06g0687700 [Oryza sativa (japonica cultivar-group)] 739 1.74816e-76
rwhei20m17
( singlet )
2003 Dormant seed with water absorption after breaking   666 bp 1 Clones putative protein kinase [Hordeum vulgare subsp. vulgare] 514 1.72959e-50
rwhei20l20
( singlet )
2003 Dormant seed with water absorption after breaking   493 bp 1 Clones sm protein [Zea mays] >gi|195627350|gb|ACG35505.1| sm protein [Zea mays] 286 2.11993e-24
rwhei20o20
( singlet )
2003 Dormant seed with water absorption after breaking   701 bp 1 Clones hypothetical protein OsJ_004551 [Oryza sativa (japonica cultivar-group)] 210 3.40047e-15
whei1b03
( singlet )
2003 Dormant seed with water absorption after breaking   569 bp 1 Clones hypothetical protein Pjdr2DRAFT_3883 [Paenibacillus sp. JDR-2] >gi|169004455|gb|EDS51313.1| hypothetical protein Pjdr2DRAFT_3883 [Paenibacillus sp. JDR-2] 77 5.5
rwhei20o05
( singlet )
2003 Dormant seed with water absorption after breaking   778 bp 1 Clones hypothetical protein Pjdr2DRAFT_3883 [Paenibacillus sp. JDR-2] >gi|169004455|gb|EDS51313.1| hypothetical protein Pjdr2DRAFT_3883 [Paenibacillus sp. JDR-2] 77 5.5
rwhei20l17
( singlet )
2003 Dormant seed with water absorption after breaking   730 bp 1 Clones hypothetical protein OsI_26043 [Oryza sativa Indica Group] 717 6.05546e-74
whei1d02
( singlet )
2003 Dormant seed with water absorption after breaking   474 bp 1 Clones hypothetical protein OsJ_016160 [Oryza sativa (japonica cultivar-group)] 104 0.0
rwhei20l15
( singlet )
2003 Dormant seed with water absorption after breaking   302 bp 1 Clones hypothetical protein OsI_21300 [Oryza sativa Indica Group] 237 9.8699e-19
rwhei20p07
( singlet )
2003 Dormant seed with water absorption after breaking   645 bp 1 Clones hypothetical protein OsJ_019212 [Oryza sativa (japonica cultivar-group)] 644 1.35281e-65
whei1f16
( singlet )
2003 Dormant seed with water absorption after breaking   529 bp 1 Clones hypothetical protein OsJ_002518 [Oryza sativa (japonica cultivar-group)] 462 1.00492e-44
whei1f20
( singlet )
2003 Dormant seed with water absorption after breaking   510 bp 1 Clones Os09g0360400 [Oryza sativa (japonica cultivar-group)] >gi|48716651|dbj|BAD23319.1| putative holocarboxylase synthetase [Oryza sativa Japonica Group] >gi|113631210|dbj|BAF24891.1| Os09g0360400 [Oryza sativa (japonica cultivar-group)] >gi|125563403|gb|EAZ08783.1| hypothetical protein OsI_31044 [Oryza sativa Indica Group] >gi|125605409|gb|EAZ44445.1| hypothetical protein OsJ_027928 [Oryza sativa (japonica cultivar-group)] >gi|215701050|dbj|BAG92474.1| unnamed protein product [Oryza sativa Japonica Group] 496 1.03478e-48
whei1a07
( singlet )
2003 Dormant seed with water absorption after breaking   549 bp 1 Clones hypothetical protein OsJ_020124 [Oryza sativa (japonica cultivar-group)] 450 2.8288e-43
rwhei20k22
( singlet )
2003 Dormant seed with water absorption after breaking   714 bp 1 Clones acyl-desaturase [Zea mays] 633 3.18177e-64
rwhei20p10
( singlet )
2003 Dormant seed with water absorption after breaking   708 bp 1 Clones hypothetical protein OsJ_009923 [Oryza sativa (japonica cultivar-group)] 923 7.36297e-98
whei1g03
( singlet )
2003 Dormant seed with water absorption after breaking   421 bp 1 Clones diguanylate cyclase [Stigmatella aurantiaca DW4/3-1] >gi|115366704|gb|EAU65699.1| diguanylate cyclase [Stigmatella aurantiaca DW4/3-1] 97 0.0
whei11g12
( singlet )
2003 Dormant seed with water absorption after breaking   556 bp 1 Clones Os08g0159100 [Oryza sativa (japonica cultivar-group)] >gi|37806153|dbj|BAC99658.1| senescence-associated protein-like [Oryza sativa Japonica Group] >gi|113623010|dbj|BAF22955.1| Os08g0159100 [Oryza sativa (japonica cultivar-group)] >gi|215678555|dbj|BAG92210.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215697646|dbj|BAG91640.1| unnamed protein product [Oryza sativa Japonica Group] 369 7.20003e-34
whei1g07
( singlet )
2003 Dormant seed with water absorption after breaking   590 bp 1 Clones AGAP001302-PA [Anopheles gambiae str. PEST] >gi|157012862|gb|EAA01198.4| AGAP001302-PA [Anopheles gambiae str. PEST] 94 0.0
whei1g09
( singlet )
2003 Dormant seed with water absorption after breaking   340 bp 1 Clones hypothetical protein OsI_16014 [Oryza sativa Indica Group] 162 4.86559e-10
rwhei12m19
( singlet )
2003 Dormant seed with water absorption after breaking   743 bp 1 Clones Os03g0845100 [Oryza sativa (japonica cultivar-group)] >gi|113550348|dbj|BAF13791.1| Os03g0845100 [Oryza sativa (japonica cultivar-group)] 349 2.94731e-31
whei1g12
( singlet )
2003 Dormant seed with water absorption after breaking   636 bp 1 Clones hypothetical protein OsI_29754 [Oryza sativa Indica Group] 1001 5.23739e-107
whei1g13
( singlet )
2003 Dormant seed with water absorption after breaking   578 bp 1 Clones Os02g0245000 [Oryza sativa (japonica cultivar-group)] >gi|50251803|dbj|BAD27734.1| putative splicing factor 3a [Oryza sativa Japonica Group] >gi|113535949|dbj|BAF08332.1| Os02g0245000 [Oryza sativa (japonica cultivar-group)] >gi|125581463|gb|EAZ22394.1| hypothetical protein OsJ_005877 [Oryza sativa (japonica cultivar-group)] 640 3.0379e-65
rwhei4n02
( singlet )
2003 Dormant seed with water absorption after breaking   749 bp 1 Clones hypothetical protein OsJ_006711 [Oryza sativa (japonica cultivar-group)] 137 1.13218e-06
rwhei20k14
( singlet )
2003 Dormant seed with water absorption after breaking   717 bp 1 Clones Os06g0588900 [Oryza sativa (japonica cultivar-group)] >gi|50725427|dbj|BAD32899.1| membrane protein-like [Oryza sativa Japonica Group] >gi|50726574|dbj|BAD34208.1| membrane protein-like [Oryza sativa Japonica Group] >gi|113595999|dbj|BAF19873.1| Os06g0588900 [Oryza sativa (japonica cultivar-group)] >gi|125555894|gb|EAZ01500.1| hypothetical protein OsI_23531 [Oryza sativa Indica Group] >gi|125597714|gb|EAZ37494.1| hypothetical protein OsJ_020977 [Oryza sativa (japonica cultivar-group)] 926 3.39952e-98
rwhei20k10
( singlet )
2003 Dormant seed with water absorption after breaking   461 bp 1 Clones unknown [Zea mays] >gi|194702922|gb|ACF85545.1| unknown [Zea mays] 115 0.0
rwhei20j16
( singlet )
2003 Dormant seed with water absorption after breaking   700 bp 1 Clones hypothetical protein OsI_09382 [Oryza sativa Indica Group] 645 1.23142e-65
whei1g20
( singlet )
2003 Dormant seed with water absorption after breaking   330 bp 1 Clones hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] >gi|57226342|gb|AAW42802.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] 80 1.5
rwhei4p21
( singlet )
2003 Dormant seed with water absorption after breaking   716 bp 1 Clones isopenicillin N epimerase [Zea mays] 805 3.61518e-84
whei1g23
( singlet )
2003 Dormant seed with water absorption after breaking   680 bp 1 Clones hypothetical protein OsI_28946 [Oryza sativa Indica Group] 334 1.34468e-29
whei1g24
( singlet )
2003 Dormant seed with water absorption after breaking   378 bp 1 Clones Os01g0284500 [Oryza sativa (japonica cultivar-group)] >gi|2655291|gb|AAC04835.1| germin-like protein 4 [Oryza sativa] >gi|13486730|dbj|BAB39965.1| probable germin protein 4 [Oryza sativa Japonica Group] >gi|13486746|dbj|BAB39980.1| putative nectarin I [Oryza sativa Japonica Group] >gi|15408833|dbj|BAB64225.1| putative nectarin I [Oryza sativa Japonica Group] >gi|113532301|dbj|BAF04684.1| Os01g0284500 [Oryza sativa (japonica cultivar-group)] >gi|125525440|gb|EAY73554.1| hypothetical protein OsI_01439 [Oryza sativa Indica Group] >gi|125569958|gb|EAZ11473.1| hypothetical protein OsJ_001298 [Oryza sativa (japonica cultivar-group)] >gi|215686506|dbj|BAG87767.1| unnamed protein product [Oryza sativa Japonica Group] 379 3.4073e-35
rwhei20j05
( singlet )
2003 Dormant seed with water absorption after breaking   783 bp 1 Clones ER lumen protein retaining receptor C28H8.4 [Zea mays] 914 9.87739e-97
whei1h02
( singlet )
2003 Dormant seed with water absorption after breaking   228 bp 1 Clones hypothetical protein MPER_11534 [Moniliophthora perniciosa FA553] 81 1.2
whei1h04
( singlet )
2003 Dormant seed with water absorption after breaking   635 bp 1 Clones hypothetical protein OsI_29365 [Oryza sativa Indica Group] 837 5.44505e-88
whei1h08
( singlet )
2003 Dormant seed with water absorption after breaking   439 bp 1 Clones hypothetical protein OsI_32387 [Oryza sativa Indica Group] 393 7.97665e-37
whei1h11
( singlet )
2003 Dormant seed with water absorption after breaking   496 bp 1 Clones dehydrin 1 [Triticum turgidum subsp. durum] 171 4.69957e-11
rwhei4o13
( singlet )
2003 Dormant seed with water absorption after breaking   749 bp 1 Clones hypothetical protein OsI_02372 [Oryza sativa Indica Group] 796 4.35011e-83
rwhei20i16
( singlet )
2003 Dormant seed with water absorption after breaking   680 bp 1 Clones MIKC-type MADS-box transcription factor WM24B [Triticum aestivum] 346 1.83806e-48
rwhei4n01
( singlet )
2003 Dormant seed with water absorption after breaking   792 bp 1 Clones hypothetical protein OsJ_014051 [Oryza sativa (japonica cultivar-group)] 99 0.0
rwhei4m23
( singlet )
2003 Dormant seed with water absorption after breaking   755 bp 1 Clones hypothetical protein OsJ_004497 [Oryza sativa (japonica cultivar-group)] 671 1.38178e-68
rwhei4m22
( singlet )
2003 Dormant seed with water absorption after breaking   291 bp 1 Clones proline-rich protein [Potamogeton distinctus] 148 2.09276e-08
whei11m14
( singlet )
2003 Dormant seed with water absorption after breaking   524 bp 1 Clones DNA polymerase alpha subunit one [Chlamydomonas reinhardtii] >gi|158273602|gb|EDO99390.1| DNA polymerase alpha subunit one [Chlamydomonas reinhardtii] 78 3.3
whei1h24
( singlet )
2003 Dormant seed with water absorption after breaking   493 bp 1 Clones putative FtsH protease [Triticum monococcum] 690 2.9434e-71
rwhei4m09
( singlet )
2003 Dormant seed with water absorption after breaking   738 bp 1 Clones hypothetical protein OsI_05274 [Oryza sativa Indica Group] 491 9.99596e-48
whei1i05
( singlet )
2003 Dormant seed with water absorption after breaking   621 bp 1 Clones Os03g0670200 [Oryza sativa (japonica cultivar-group)] >gi|108710318|gb|ABF98113.1| mannosyltransferase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113549340|dbj|BAF12783.1| Os03g0670200 [Oryza sativa (japonica cultivar-group)] >gi|215697492|dbj|BAG91486.1| unnamed protein product [Oryza sativa Japonica Group] 830 2.24128e-98
whei1i07
( singlet )
2003 Dormant seed with water absorption after breaking   658 bp 1 Clones hypothetical protein LOC100192794 [Zea mays] >gi|194691586|gb|ACF79877.1| unknown [Zea mays] 736 2.99411e-76
whei1i12
( singlet )
2003 Dormant seed with water absorption after breaking   163 bp 1 Clones hypothetical protein LOC100192794 [Zea mays] >gi|194691586|gb|ACF79877.1| unknown [Zea mays] 736 2.99411e-76
rwhei20i11
( singlet )
2003 Dormant seed with water absorption after breaking   664 bp 1 Clones hypothetical protein OsI_13298 [Oryza sativa Indica Group] 101 0.0
rwhei20h21
( singlet )
2003 Dormant seed with water absorption after breaking   730 bp