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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig List

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Hit Count : 2073
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Contig Registered year Tissue Sequence Clone Homology (BLAST )
Top hit (Definition) Score E-Value
whem1a15
( singlet )
2003 Dormant seed with water absorption   194 bp 1 Clones hypothetical protein OsI_26455 [Oryza sativa Indica Group] 308 5.83937e-27
whem1a19
( singlet )
2003 Dormant seed with water absorption   122 bp 1 Clones hypothetical protein OsI_26455 [Oryza sativa Indica Group] 308 5.83937e-27
whem1a20
( singlet )
2003 Dormant seed with water absorption   249 bp 1 Clones hypothetical protein OsI_09535 [Oryza sativa Indica Group] 317 5.15068e-28
whem1b12
( singlet )
2003 Dormant seed with water absorption   219 bp 1 Clones hypothetical protein OsI_09535 [Oryza sativa Indica Group] 317 5.15068e-28
whem1b13
( singlet )
2003 Dormant seed with water absorption   193 bp 1 Clones F1-ATPase [Triticum aestivum] 196 5.68741e-14
whem1d02
( singlet )
2003 Dormant seed with water absorption   157 bp 1 Clones F1-ATPase [Triticum aestivum] 196 5.68741e-14
whem1d04
( singlet )
2003 Dormant seed with water absorption   318 bp 1 Clones Os03g0271800 [Oryza sativa (japonica cultivar-group)] >gi|113548166|dbj|BAF11609.1| Os03g0271800 [Oryza sativa (japonica cultivar-group)] 83 0.7
whem1a13
( singlet )
2003 Dormant seed with water absorption   102 bp 1 Clones Os03g0271800 [Oryza sativa (japonica cultivar-group)] >gi|113548166|dbj|BAF11609.1| Os03g0271800 [Oryza sativa (japonica cultivar-group)] 83 0.7
whem1d12
( singlet )
2003 Dormant seed with water absorption   579 bp 1 Clones hypothetical protein OsI_24437 [Oryza sativa Indica Group] 264 1.20855e-21
whem1c04
( singlet )
2003 Dormant seed with water absorption   113 bp 1 Clones hypothetical protein OsI_10600 [Oryza sativa Indica Group] 149 1.60381e-08
whem1a07
( singlet )
2003 Dormant seed with water absorption   298 bp 1 Clones guanylyl cyclase [Triticum aestivum] 473 6.94261e-47
whem1a08
( singlet )
2003 Dormant seed with water absorption   550 bp 1 Clones homeobox-like resistance [Triticum aestivum] >gi|167882868|gb|ACA06113.1| homeobox-like resistance protein [Triticum aestivum] 505 1.1803e-49
whem1e11
( singlet )
2003 Dormant seed with water absorption   154 bp 1 Clones homeobox-like resistance [Triticum aestivum] >gi|167882868|gb|ACA06113.1| homeobox-like resistance protein [Triticum aestivum] 505 1.1803e-49
whem1a11
( singlet )
2003 Dormant seed with water absorption   350 bp 1 Clones homeobox-like resistance [Triticum aestivum] >gi|167882868|gb|ACA06113.1| homeobox-like resistance protein [Triticum aestivum] 505 1.1803e-49
whem1c01
( singlet )
2003 Dormant seed with water absorption   154 bp 1 Clones unknown [Zea mays] 227 1.44426e-17
whem1e19
( singlet )
2003 Dormant seed with water absorption   127 bp 1 Clones PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] 79 2.0
whem1e23
( singlet )
2003 Dormant seed with water absorption   276 bp 1 Clones unnamed protein product [Vitis vinifera] 176 1.16378e-11
whem1c21
( singlet )
2003 Dormant seed with water absorption   194 bp 1 Clones hypothetical protein OsI_18439 [Oryza sativa Indica Group] >gi|125592800|gb|EAZ32859.1| hypothetical protein OsJ_016342 [Oryza sativa (japonica cultivar-group)] 95 0.0
whem1f09
( singlet )
2003 Dormant seed with water absorption   244 bp 1 Clones PREDICTED: similar to embryo cathepsin L-associated protein [Strongylocentrotus purpuratus] >gi|115951392|ref|XP_001186411.1| PREDICTED: similar to embryo cathepsin L-associated protein [Strongylocentrotus purpuratus] 78 2.6
whem1f10
( singlet )
2003 Dormant seed with water absorption   289 bp 1 Clones lipoprotein precursor [Lactobacillus plantarum WCFS1] >gi|28270634|emb|CAD63540.1| lipoprotein precursor [Lactobacillus plantarum WCFS1] 92 0.0
whem1a05
( singlet )
2003 Dormant seed with water absorption   309 bp 1 Clones hypothetical protein [Dictyostelium discoideum AX4] >gi|28828621|gb|AAO51224.1| similar to Plasmodium falciparum. Hypothetical protein [Dictyostelium discoideum] >gi|60470826|gb|EAL68798.1| hypothetical protein DDBDRAFT_0169114 [Dictyostelium discoideum AX4] 76 4.5
whem17n17
( singlet )
2003 Dormant seed with water absorption   319 bp 1 Clones hypothetical protein OsI_25228 [Oryza sativa Indica Group] 441 2.21303e-42
whem1f21
( singlet )
2003 Dormant seed with water absorption   123 bp 1 Clones hypothetical protein OsI_25228 [Oryza sativa Indica Group] 441 2.21303e-42
rwhem20p22
( singlet )
2003 Dormant seed with water absorption   760 bp 1 Clones RecName: Full=T-complex protein 1 subunit epsilon; Short=TCP-1-epsilon; AltName: Full=CCT-epsilon; AltName: Full=TCP-K19 >gi|435173|emb|CAA53396.1| T complex polypeptide 1 [Avena sativa] 838 6.06626e-88
whem1g09
( singlet )
2003 Dormant seed with water absorption   319 bp 1 Clones hypothetical protein OsI_08803 [Oryza sativa Indica Group] 513 9.91084e-51
whem14k01
( singlet )
2003 Dormant seed with water absorption   600 bp 1 Clones hypothetical protein OsI_00099 [Oryza sativa Indica Group] 571 3.31072e-57
whem14k04
( singlet )
2003 Dormant seed with water absorption   528 bp 1 Clones Os07g0647100 [Oryza sativa (japonica cultivar-group)] >gi|33146499|dbj|BAC79608.1| unknown protein [Oryza sativa Japonica Group] >gi|50510248|dbj|BAD31454.1| unknown protein [Oryza sativa Japonica Group] >gi|113612002|dbj|BAF22380.1| Os07g0647100 [Oryza sativa (japonica cultivar-group)] >gi|215694425|dbj|BAG89442.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218200129|gb|EEC82556.1| hypothetical protein OsI_27100 [Oryza sativa Indica Group] 604 3.00638e-66
whem1g15
( singlet )
2003 Dormant seed with water absorption   297 bp 1 Clones PREDICTED: coiled-coil domain containing 93 [Pan troglodytes] 77 3.5
whem14k05
( singlet )
2003 Dormant seed with water absorption   616 bp 1 Clones hypothetical protein OsI_32297 [Oryza sativa Indica Group] 548 1.63858e-54
rwhem6l02
( singlet )
2003 Dormant seed with water absorption   779 bp 1 Clones protein phosphatase 2A B'kappa subunit [Oryza sativa (japonica cultivar-group)] >gi|49328037|gb|AAT58738.1| protein phosphatase 2A B'kappa subunit [Oryza sativa (japonica cultivar-group)] >gi|125595158|gb|EAZ35217.1| hypothetical protein OsJ_018700 [Oryza sativa (japonica cultivar-group)] 778 5.77214e-81
whem1h09
( singlet )
2003 Dormant seed with water absorption   392 bp 1 Clones ATP-dependent transporter YFL028C [Zea mays] 309 4.37234e-27
rwhem15c02
( singlet )
2003 Dormant seed with water absorption   767 bp 1 Clones Os03g0610900 [Oryza sativa (japonica cultivar-group)] >gi|71153749|sp|Q75H77|SAPKA_ORYSJ RecName: Full=Serine/threonine-protein kinase SAPK10; AltName: Full=Osmotic stress/abscisic acid-activated protein kinase 10 >gi|37700316|gb|AAR00606.1| putative protein kinase [Oryza sativa (japonica cultivar-group)] >gi|54400314|dbj|BAD18006.2| serine/threonine protein kinase SAPK10 [Oryza sativa Japonica Group] >gi|108709784|gb|ABF97579.1| Serine/threonine-protein kinase SAPK9, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113549124|dbj|BAF12567.1| Os03g0610900 [Oryza sativa (japonica cultivar-group)] >gi|125544846|gb|EAY90985.1| hypothetical protein OsI_12595 [Oryza sativa Indica Group] >gi|125587104|gb|EAZ27768.1| hypothetical protein OsJ_011251 [Oryza sativa (japonica cultivar-group)] 594 2.0681e-65
rwhem20p19
( singlet )
2003 Dormant seed with water absorption   734 bp 1 Clones hypothetical protein OsJ_004596 [Oryza sativa (japonica cultivar-group)] 108 2.78708e-10
whem1i06
( singlet )
2003 Dormant seed with water absorption   311 bp 1 Clones microtubule associated monoxygenase, calponin and LIM domain containing 3 isoform 1 [Homo sapiens] 84 0.5
rwhem6k23
( singlet )
2003 Dormant seed with water absorption   518 bp 1 Clones ELF3 protein [Triticum aestivum] 144 7.24811e-08
rwhem6k22
( singlet )
2003 Dormant seed with water absorption   750 bp 1 Clones unknown [Zea mays] 676 3.60571e-69
rwhem6l16
( singlet )
2003 Dormant seed with water absorption   282 bp 1 Clones OSJNBb0015D13.3 [Oryza sativa (japonica cultivar-group)] 205 2.79684e-16
rwhem20p13
( singlet )
2003 Dormant seed with water absorption   771 bp 1 Clones hypothetical protein OsI_24420 [Oryza sativa Indica Group] 451 1.04121e-45
whem1i23
( singlet )
2003 Dormant seed with water absorption   422 bp 1 Clones hypothetical protein OsI_00686 [Oryza sativa Indica Group] 586 3.3988e-59
whem1j09
( singlet )
2003 Dormant seed with water absorption   434 bp 1 Clones hypothetical protein OsI_23887 [Oryza sativa Indica Group] 229 8.32817e-18
whem1j12
( singlet )
2003 Dormant seed with water absorption   111 bp 1 Clones hypothetical protein OsI_23887 [Oryza sativa Indica Group] 229 8.32817e-18
whem1j14
( singlet )
2003 Dormant seed with water absorption   137 bp 1 Clones hypothetical protein OsI_23887 [Oryza sativa Indica Group] 229 8.32817e-18
whem1j16
( singlet )
2003 Dormant seed with water absorption   133 bp 1 Clones hypothetical protein OsI_23887 [Oryza sativa Indica Group] 229 8.32817e-18
rwhem20p10
( singlet )
2003 Dormant seed with water absorption   280 bp 1 Clones hypothetical protein OsI_38957 [Oryza sativa Indica Group] 254 1.04274e-20
whem1j24
( singlet )
2003 Dormant seed with water absorption   557 bp 1 Clones hypothetical protein OsI_02147 [Oryza sativa Indica Group] 205 7.4855e-15
whem1k09
( singlet )
2003 Dormant seed with water absorption   115 bp 1 Clones hypothetical protein OsI_02147 [Oryza sativa Indica Group] 205 7.4855e-15
whem1k12
( singlet )
2003 Dormant seed with water absorption   210 bp 1 Clones hypothetical protein OsI_02147 [Oryza sativa Indica Group] 205 7.4855e-15
whem1k13
( singlet )
2003 Dormant seed with water absorption   203 bp 1 Clones hypothetical protein [Cryptosporidium parvum Iowa II] >gi|46229720|gb|EAK90538.1| hypothetical protein with signal peptide and 8 or more transmembrane domains [Cryptosporidium parvum Iowa II] 78 2.7
whem1k15
( singlet )
2003 Dormant seed with water absorption   161 bp 1 Clones actin-1 [Zea mays] 85 0.4
whem1k18
( singlet )
2003 Dormant seed with water absorption   106 bp 1 Clones hypothetical protein OsJ_012270 [Oryza sativa (japonica cultivar-group)] 110 0.0
whem14k16
( singlet )
2003 Dormant seed with water absorption   650 bp 1 Clones hypothetical protein OsJ_002250 [Oryza sativa (japonica cultivar-group)] 1008 8.57283e-108
whem14l04
( singlet )
2003 Dormant seed with water absorption   430 bp 1 Clones unknown [Zea mays] 175 1.52771e-11
whem1l04
( singlet )
2003 Dormant seed with water absorption   169 bp 1 Clones tenascin [Culex quinquefasciatus] >gi|167878262|gb|EDS41645.1| tenascin [Culex quinquefasciatus] 74 7.8
whem1l06
( singlet )
2003 Dormant seed with water absorption   346 bp 1 Clones Os05g0350600 [Oryza sativa (japonica cultivar-group)] >gi|113578826|dbj|BAF17189.1| Os05g0350600 [Oryza sativa (japonica cultivar-group)] 325 6.25561e-29
whem1l11
( singlet )
2003 Dormant seed with water absorption   144 bp 1 Clones magnesium chelatase D subunit [Arthrospira platensis] 77 3.4
whem1l16
( singlet )
2003 Dormant seed with water absorption   304 bp 1 Clones hypothetical protein OsI_01291 [Oryza sativa Indica Group] >gi|125569826|gb|EAZ11341.1| hypothetical protein OsJ_001166 [Oryza sativa (japonica cultivar-group)] 440 2.84143e-42
rwhem6l19
( singlet )
2003 Dormant seed with water absorption   409 bp 1 Clones hypothetical protein BRAFLDRAFT_159818 [Branchiostoma floridae] >gi|210092856|gb|EEA41073.1| hypothetical protein BRAFLDRAFT_159818 [Branchiostoma floridae] 84 0.5
whem1l23
( singlet )
2003 Dormant seed with water absorption   614 bp 1 Clones hypothetical protein OsI_22252 [Oryza sativa Indica Group] 613 2.57448e-63
whem1l24
( singlet )
2003 Dormant seed with water absorption   186 bp 1 Clones 26S proteasome non-ATPase regulatory subunit 14 [Zea mays] 240 4.5105e-19
whem1m02
( singlet )
2003 Dormant seed with water absorption   246 bp 1 Clones OSJNBa0068L06.9 [Oryza sativa (japonica cultivar-group)] >gi|116317777|emb|CAH65755.1| OSIGBa0123D13.4 [Oryza sativa (indica cultivar-group)] >gi|125546927|gb|EAY92749.1| hypothetical protein OsI_14504 [Oryza sativa Indica Group] >gi|125589074|gb|EAZ29424.1| hypothetical protein OsJ_012907 [Oryza sativa (japonica cultivar-group)] >gi|215697911|dbj|BAG92153.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215737534|dbj|BAG96664.1| unnamed protein product [Oryza sativa Japonica Group] 285 2.65442e-24
whem1m05
( singlet )
2003 Dormant seed with water absorption   445 bp 1 Clones Os04g0464500 [Oryza sativa (japonica cultivar-group)] >gi|113564589|dbj|BAF14932.1| Os04g0464500 [Oryza sativa (japonica cultivar-group)] 362 3.11005e-33
rwhem6k15
( singlet )
2003 Dormant seed with water absorption   557 bp 1 Clones hypothetical protein OsI_30542 [Oryza sativa Indica Group] 412 7.4336e-39
rwhem20p05
( singlet )
2003 Dormant seed with water absorption   781 bp 1 Clones DNA binding protein [Zea mays] 254 3.3575e-20
whem1m11
( singlet )
2003 Dormant seed with water absorption   233 bp 1 Clones hypothetical protein OsI_20913 [Oryza sativa Indica Group] 291 5.4403e-25
whem1m12
( singlet )
2003 Dormant seed with water absorption   468 bp 1 Clones hypothetical protein KAOT1_11206 [Kordia algicida OT-1] >gi|161324155|gb|EDP95487.1| hypothetical protein KAOT1_11206 [Kordia algicida OT-1] 77 3.5
rwhem20o19
( singlet )
2003 Dormant seed with water absorption   168 bp 1 Clones 40S ribosomal protein S15a [Zea mays] >gi|195610836|gb|ACG27248.1| 40S ribosomal protein S15a [Zea mays] 92 0.0
whem1m16
( singlet )
2003 Dormant seed with water absorption   160 bp 1 Clones 40S ribosomal protein S15a [Zea mays] >gi|195610836|gb|ACG27248.1| 40S ribosomal protein S15a [Zea mays] 92 0.0
whem1m17
( singlet )
2003 Dormant seed with water absorption   530 bp 1 Clones Os01g0170400 [Oryza sativa (japonica cultivar-group)] >gi|113531671|dbj|BAF04054.1| Os01g0170400 [Oryza sativa (japonica cultivar-group)] 432 3.08747e-41
whem1m18
( singlet )
2003 Dormant seed with water absorption   153 bp 1 Clones Os01g0170400 [Oryza sativa (japonica cultivar-group)] >gi|113531671|dbj|BAF04054.1| Os01g0170400 [Oryza sativa (japonica cultivar-group)] 432 3.08747e-41
rwhem15b22
( singlet )
2003 Dormant seed with water absorption   664 bp 1 Clones hypothetical protein OsI_11478 [Oryza sativa Indica Group] 289 2.10404e-52
whem1p09
( singlet )
2003 Dormant seed with water absorption   200 bp 1 Clones hypothetical protein OsJ_021643 [Oryza sativa (japonica cultivar-group)] 87 0.2
rwhem15b12
( singlet )
2003 Dormant seed with water absorption   793 bp 1 Clones hypothetical protein OsI_00556 [Oryza sativa Indica Group] 519 6.42053e-51
rwhem6l21
( singlet )
2003 Dormant seed with water absorption   762 bp 1 Clones Os06g0164000 [Oryza sativa (japonica cultivar-group)] >gi|55296129|dbj|BAD67847.1| putative transcription factor [Oryza sativa Japonica Group] >gi|113594940|dbj|BAF18814.1| Os06g0164000 [Oryza sativa (japonica cultivar-group)] 649 4.99716e-66
whem1n09
( singlet )
2003 Dormant seed with water absorption   223 bp 1 Clones Os06g0164000 [Oryza sativa (japonica cultivar-group)] >gi|55296129|dbj|BAD67847.1| putative transcription factor [Oryza sativa Japonica Group] >gi|113594940|dbj|BAF18814.1| Os06g0164000 [Oryza sativa (japonica cultivar-group)] 649 4.99716e-66
whem1n13
( singlet )
2003 Dormant seed with water absorption   275 bp 1 Clones PREDICTED: similar to mCG22338 [Acyrthosiphon pisum] 74 7.8
whem1n16
( singlet )
2003 Dormant seed with water absorption   161 bp 1 Clones PREDICTED: similar to mCG22338 [Acyrthosiphon pisum] 74 7.8
whem14m05
( singlet )
2003 Dormant seed with water absorption   539 bp 1 Clones Os02g0826500 [Oryza sativa (japonica cultivar-group)] >gi|48716441|dbj|BAD23048.1| putative ABC transporter [Oryza sativa Japonica Group] >gi|113538118|dbj|BAF10501.1| Os02g0826500 [Oryza sativa (japonica cultivar-group)] 701 2.10173e-72
whem1o09
( singlet )
2003 Dormant seed with water absorption   361 bp 1 Clones hypothetical protein OsI_29416 [Oryza sativa Indica Group] 190 2.76729e-13
whem1o12
( singlet )
2003 Dormant seed with water absorption   177 bp 1 Clones Os11g0677100 [Oryza sativa (japonica cultivar-group)] >gi|113645672|dbj|BAF28813.1| Os11g0677100 [Oryza sativa (japonica cultivar-group)] 171 4.40167e-11
rwhem20o17
( singlet )
2003 Dormant seed with water absorption   793 bp 1 Clones hypothetical protein OsJ_030947 [Oryza sativa (japonica cultivar-group)] 760 7.2782e-79
rwhem15a23
( singlet )
2003 Dormant seed with water absorption   707 bp 1 Clones hypothetical protein OsI_27048 [Oryza sativa Indica Group] 815 2.4334e-85
whem1o18
( singlet )
2003 Dormant seed with water absorption   138 bp 1 Clones SAM domain family protein [Zea mays] 113 0.0
whem1o21
( singlet )
2003 Dormant seed with water absorption   123 bp 1 Clones SAM domain family protein [Zea mays] 113 0.0
whem14m21
( singlet )
2003 Dormant seed with water absorption   458 bp 1 Clones expressed protein [Oryza sativa (japonica cultivar-group)] 235 1.67358e-18
rwhem6l23
( singlet )
2003 Dormant seed with water absorption   694 bp 1 Clones hypothetical protein OsJ_020564 [Oryza sativa (japonica cultivar-group)] 562 5.10785e-56
rwhem20o16
( singlet )
2003 Dormant seed with water absorption   723 bp 1 Clones hypothetical protein [Oryza sativa Japonica Group] >gi|125559690|gb|EAZ05226.1| hypothetical protein OsI_27424 [Oryza sativa Indica Group] >gi|125601595|gb|EAZ41171.1| hypothetical protein OsJ_024654 [Oryza sativa (japonica cultivar-group)] 449 7.02638e-43
whem1p07
( singlet )
2003 Dormant seed with water absorption   199 bp 1 Clones putative H-box binding protein, KAP2, with alternative splicing isoforms [Oryza sativa (japonica cultivar-group)] 274 5.09894e-23
rwhem20o05
( singlet )
2003 Dormant seed with water absorption   684 bp 1 Clones hypothetical protein [Zea mays] 254 2.59481e-20
rwhem6k01
( singlet )
2003 Dormant seed with water absorption   531 bp 1 Clones hypothetical protein [Zea mays] 254 2.59481e-20
rwhem6k06
( singlet )
2003 Dormant seed with water absorption   454 bp 1 Clones hypothetical protein OsI_08182 [Oryza sativa Indica Group] 203 8.63274e-15
rwhem6j23
( singlet )
2003 Dormant seed with water absorption   700 bp 1 Clones hypothetical protein OsJ_008200 [Oryza sativa (japonica cultivar-group)] 786 5.44808e-82
whem2a05
( singlet )
2003 Dormant seed with water absorption   392 bp 1 Clones glutathione transferase [Triticum aestivum] 473 4.20559e-46
rwhem6j18
( singlet )
2003 Dormant seed with water absorption   760 bp 1 Clones hypothetical protein OsI_14437 [Oryza sativa Indica Group] 955 1.64436e-101
rwhem6j16
( singlet )
2003 Dormant seed with water absorption   280 bp 1 Clones hypothetical protein OsI_14437 [Oryza sativa Indica Group] 955 1.64436e-101
whem2a11
( singlet )
2003 Dormant seed with water absorption   609 bp 1 Clones hypothetical protein OsI_08701 [Oryza sativa Indica Group] 278 3.25977e-23
whem2a14
( singlet )
2003 Dormant seed with water absorption   577 bp 1 Clones hypothetical protein OsI_02594 [Oryza sativa Indica Group] 308 9.55375e-27
whem2a16
( singlet )
2003 Dormant seed with water absorption   595 bp 1 Clones hypothetical protein OsJ_027119 [Oryza sativa (japonica cultivar-group)] 939 6.94581e-100
rwhem20o01
( singlet )
2003 Dormant seed with water absorption   727 bp 1 Clones hypothetical protein OsI_05296 [Oryza sativa Indica Group] 625 2.79423e-63
whem2a18
( singlet )
2003 Dormant seed with water absorption   539 bp 1 Clones glutaryl-CoA dehydrogenase [Zea mays] 651 8.42943e-67
whem2a20
( singlet )
2003 Dormant seed with water absorption   596 bp 1 Clones hypothetical protein OsJ_000199 [Oryza sativa (japonica cultivar-group)] 916 3.22646e-97
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