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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download  -------------------------- How to Order Resources MTA Sample

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 213
First Previous 1-100 101-200 201-213 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whf_9050_whr_a04r 2012 3' 459bp       PREDICTED:salutaridinereductase-like[Brachypodiumdistachyon] 272 4.04715e-71
whf_9066_whr_a05r 2012 3' 453bp Contig16997       Os07g0291100[OryzasativaJaponicaGroup] 233 2.11093e-59
whf_9002_whr_a07r 2012 3' 505bp       unnamedproteinproduct[Sorangiumcellulosum'Soce56'] 49 0.000425932
whf_9018_whr_a08r 2012 3' 364bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.78364e-26
whf_9034_whr_a09r 2012 3' 543bp Contig35391       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 261 6.733e-68
whf_9050_whr_a10r 2012 3' 522bp Contig11353       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.05278e-48
whf_9066_whr_a11r 2012 3' 463bp Contig11850       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 3.08971e-58
whf_9082_whr_a12r 2012 3' 539bp       SETdomainprotein[Triticumaestivum] 146 3.10699e-33
whf_9002_whr_a13r 2012 3' 528bp Contig14761       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.31381e-54
whf_9018_whr_a14r 2012 3' 475bp Contig1428       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.57956e-25
whf_9066_whr_a17r 2012 3' 204bp       hypotheticalproteinARALYDRAFT_493465[Arabidopsislyratasubsp.lyrata] 36 4.94807
whf_9002_whr_a19r 2012 3' 422bp Contig4518       predictedprotein[Hordeumvulgaresubsp.vulgare] 199 3.41538e-49
whf_9050_whr_a22r 2012 3' 592bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 5.48216e-70
whf_9083_whr_b06r 2012 3' 584bp Contig1439       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 280 1.73541e-73
whf_9003_whr_b07r 2012 3' 176bp       conserveddomainprotein[SlackiaexiguaATCC700122] 38 0.986708
whf_9019_whr_b08r 2012 3' 585bp Contig7476       ADP-glucose-pyrophosphorylaselargesubunit[Triticumaestivum] 181 1.09712e-43
whf_9035_whr_b09r 2012 3' 533bp Contig4421       RecName:Full=Acylcarrierprotein3,chloroplastic;AltName:Full=AcylcarrierproteinIII;Short=ACPIII;Flags:Precursor 203 2.05246e-50
whf_9051_whr_b10r 2012 3' 479bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.16543e-56
whf_9083_whr_b12r 2012 3' 522bp Contig27399       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.47789e-66
whf_9003_whr_b13r 2012 3' 495bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 1.96016e-81
whf_9067_whr_b17r 2012 3' 486bp Contig3387       formin2A[Physcomitrellapatens] 73 2.15806e-11
whf_9003_whr_b19r 2012 3' 526bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 2.63498e-71
whf_9019_whr_b20r 2012 3' 554bp       PREDICTED:hypotheticalproteinLOC100613474[Pantroglodytes] 38 1.28487
whf_9067_whr_b23r 2012 3' 271bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 65 7.59615e-09
whf_9010_whr_c01r 2012 3' 563bp Contig4280       uncharacterizedproteinLOC100384428[Zeamays] 192 5.63077e-47
whf_9026_whr_c02r 2012 3' 487bp       MBD2[Triticumaestivum] 204 1.05869e-50
whf_9074_whr_c05r 2012 3' 481bp       RecName:Full=Probablemetal-nicotianaminetransporterYSL3;AltName:Full=ProteinYELLOWSTRIPELIKE3;Short=OsYSL3 119 2.15859e-39
whf_9010_whr_c07r 2012 3' 582bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 4.79931e-76
whf_9026_whr_c08r 2012 3' 556bp Contig800       hypersensitiveinducedresponseprotein3[Triticumaestivum] 328 8.1185e-88
whf_9042_whr_c09r 2012 3' 464bp       hypotheticalproteinOsJ_24922[OryzasativaJaponicaGroup] 100 1.65741e-19
whf_9058_whr_c10r 2012 3' 370bp Contig8268       replicationinitiatorprotein[Rhodococcussp.NS1] 37 1.72524
whf_9074_whr_c11r 2012 3' 464bp       pollenprofilin3R4-2[Triticumturgidumsubsp.durumxSecalecereale] 198 5.84046e-49
whf_9090_whr_c12r 2012 3' 596bp       hypotheticalproteinOsI_15702[OryzasativaIndicaGroup] 242 4.27303e-62
whf_9026_whr_c14r 2012 3' 527bp Contig26230       uncharacterizedproteinLOC100384428[Zeamays] 194 1.19105e-47
whf_9042_whr_c15r 2012 3' 513bp       PREDICTED:LL-diaminopimelateaminotransferase,chloroplastic-like[Brachypodiumdistachyon] 231 6.3025e-59
whf_9074_whr_c17r 2012 3' 392bp Contig26509       lipoxygenase2[Triticumaestivum] 144 1.27268e-32
whf_9090_whr_c18r 2012 3' 532bp Contig1463       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.92105e-48
whf_9026_whr_c20r 2012 3' 107bp            
whf_9074_whr_c23r 2012 3' 499bp Contig1233       PREDICTED:methionineaminopeptidase2B-like[Brachypodiumdistachyon] 233 2.0992e-59
whf_9027_whr_d02r 2012 3' 589bp Contig1475       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 1.73197e-76
whf_9075_whr_d05r 2012 3' 485bp Contig3375       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.29402e-64
whf_9011_whr_d07r 2012 3' 503bp       PREDICTED:uncharacterizedproteinLOC100836999[Brachypodiumdistachyon] 190 1.18374e-46
whf_9027_whr_d08r 2012 3' 552bp Contig20515       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.22116e-69
whf_9043_whr_d09r 2012 3' 537bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 9.29003e-54
whf_9059_whr_d10r 2012 3' 531bp Contig2690       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.08333e-67
whf_9075_whr_d11r 2012 3' 217bp Contig25743       GH16252[Drosophilagrimshawi] 37 2.18454
whf_9027_whr_d14r 2012 3' 478bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 8.04322e-35
whf_9043_whr_d15r 2012 3' 521bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.93675e-52
whf_9059_whr_d16r 2012 3' 495bp Contig28815       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.28238e-48
whf_9091_whr_d18r 2012 3' 478bp Contig720       PREDICTED:omega-6fattyaciddesaturase,endoplasmicreticulumisozyme2-likeisoform1[Brachypodiumdistachyon] 75 5.58383e-12
whf_9011_whr_d19r 2012 3' 497bp Contig7963       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 4.82823e-64
whf_9027_whr_d20r 2012 3' 498bp Contig28815       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 4.38725e-49
whf_9059_whr_d22r 2012 3' 440bp Contig15960       PREDICTED:GTPaseDer-like[Brachypodiumdistachyon] 185 6.49808e-45
whf_9075_whr_d23r 2012 3' 576bp Contig4373       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 254 1.26634e-65
whf_9091_whr_d24r 2012 3' 260bp Contig8405       UPF0583proteinC15orf59homolog[Xenopuslaevis] 36 5.0049
whf_9004_whr_e01r 2012 3' 450bp Contig1491       alcoholdehydrogenaseADH2H[Triticumaestivum] 202 3.99029e-50
whf_9020_whr_e02r 2012 3' 453bp Contig500       PREDICTED:eukaryoticinitiationfactor4A-1-like[Brachypodiumdistachyon] 116 2.8796e-24
whf_9036_whr_e03r 2012 3' 468bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 173 2.61617e-41
whf_9052_whr_e04r 2012 3' 521bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 1.21187e-57
whf_9068_whr_e05r 2012 3' 478bp Contig2060       hypotheticalproteinTRIVIDRAFT_49852[TrichodermavirensGv29-8] 38 0.756429
whf_9004_whr_e07r 2012 3' 473bp Contig781       PREDICTED:mitochondrialsubstratecarrierfamilyproteinB-like[Brachypodiumdistachyon] 136 2.68957e-30
whf_9020_whr_e08r 2012 3' 500bp Contig8492       14-3-3protein[Triticumaestivum] 79 2.95654e-13
whf_9052_whr_e10r 2012 3' 595bp Contig9914       PREDICTED:hypotheticalproteinLOC100489543[Xenopus(Silurana)tropicalis] 48 0.0011827
whf_9068_whr_e11r 2012 3' 539bp Contig1498       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 1.1102e-14
whf_9004_whr_e13r 2012 3' 525bp Contig1233       PREDICTED:methionineaminopeptidase2B-like[Brachypodiumdistachyon] 255 4.25443e-66
whf_9020_whr_e14r 2012 3' 475bp       FHAmodulatedABCeffluxpumpwithfusedATPaseandintegralmembranesubunits[Frankiasp.CN3] 43 0.0236203
whf_9036_whr_e15r 2012 3' 513bp Contig3990       20Sproteasomebeta4subunit[Triticumaestivum] 250 1.27913e-64
whf_9084_whr_e18r 2012 3' 31bp            
whf_9036_whr_e21r 2012 3' 449bp Contig11146       RecName:Full=ThioredoxinM-type,chloroplastic;Short=Trx-M;Flags:Precursor 277 9.80275e-73
whf_9052_whr_e22r 2012 3' 530bp Contig5246       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 5.44258e-64
whf_9021_whr_f02r 2012 3' 526bp Contig1363       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.45596e-45
whf_9037_whr_f03r 2012 3' 565bp       hypotheticalprotein[MonosigabrevicollisMX1] 35 8.96892
whf_9069_whr_f05r 2012 3' 419bp Contig10672       predictedprotein[Hordeumvulgaresubsp.vulgare] 148 9.06744e-34
whf_9005_whr_f07r 2012 3' 544bp Contig344       NADP-dependentmalicenzyme[Triticumaestivum] 179 4.41552e-43
whf_9037_whr_f09r 2012 3' 506bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.75315e-45
whf_9069_whr_f11r 2012 3' 463bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.30873e-52
whf_9021_whr_f14r 2012 3' 513bp Contig20696       profilin[Triticumaestivum] 203 1.37299e-50
whf_9053_whr_f16r 2012 3' 571bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 155 1.25181e-37
whf_9085_whr_f18r 2012 3' 531bp Contig13359       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 181 8.35426e-63
whf_9053_whr_f22r 2012 3' 524bp Contig1527       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 3.72707e-62
whf_9069_whr_f23r 2012 3' 356bp       hypotheticalproteinEPVG_00363[Emilianiahuxleyivirus201] 89 4.92591e-16
whf_9085_whr_f24r 2012 3' 413bp Contig3347       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 2.09239e-59
whf_9012_whr_g01r 2012 3' 428bp Contig13721       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.33181e-45
whf_9092_whr_g06r 2012 3' 450bp Contig68       hypotheticalprotein[Aegilopstauschii] 148 6.8678e-34
whf_9028_whr_g08r 2012 3' 476bp Contig1537       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.08455e-39
whf_9044_whr_g09r 2012 3' 509bp Contig2435       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 1.43413e-31
whf_9060_whr_g10r 2012 3' 499bp Contig20365       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 2.02856e-46
whf_9076_whr_g11r 2012 3' 529bp       papain-likecysteineproteinase[Hordeumvulgaresubsp.vulgare] 289 2.13033e-76
whf_9092_whr_g12r 2012 3' 519bp Contig7453       metallothionein[Triticumaestivum] 183 2.01631e-44
whf_9012_whr_g13r 2012 3' 446bp Contig7054       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 178 6.22412e-43
whf_9092_whr_g18r 2012 3' 438bp       unnamedproteinproduct[Vitisvinifera] 81 5.27912e-15
whf_9028_whr_g20r 2012 3' 487bp Contig10901       glutathionetransferase[Triticumaestivum] 118 1.00236e-24
whf_9044_whr_g21r 2012 3' 541bp Contig31333       PREDICTED:probablenucleolarprotein5-2-like[Brachypodiumdistachyon] 327 1.3111e-87
whf_9013_whr_h01r 2012 3' 545bp       arabinoxylanarabinofuranohydrolase[Hordeumvulgare] 172 4.11329e-41
whf_9045_whr_h03r 2012 3' 484bp Contig3413       HistoneH3[Medicagotruncatula] 179 2.80519e-43
whf_9077_whr_h05r 2012 3' 542bp Contig30756       PREDICTED:uncharacterizedproteinLOC100832747[Brachypodiumdistachyon] 103 2.35766e-20
whf_9093_whr_h06r 2012 3' 561bp Contig9028       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 6.72673e-61
whf_9013_whr_h07r 2012 3' 544bp Contig14777       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.84227e-65
whf_9045_whr_h09r 2012 3' 412bp Contig33991       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 0.000147886
whf_9061_whr_h10r 2012 3' 609bp Contig18822       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 5.74351e-102
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