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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5403
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whkp_10015_a01r 2012 3' Shoot grown under continuous light 400bp       FD-like15protein[Triticumaestivum] 118 9.97303e-25
whkp_11015_a01r 2012 3' Shoot grown under continuous light 717bp Contig6376       PREDICTED:proteasomesubunitalphatype-5-like[Brachypodiumdistachyon] 354 1.176e-95
whkp_12015_a01r 2012 3' Shoot grown under continuous light 651bp Contig15752       hypotheticalproteinOsJ_16357[OryzasativaJaponicaGroup] 296 4.01955e-78
whkp_13015_a01r 2012 3' Shoot grown under continuous light 586bp       hypotheticalproteinSORBIDRAFT_07g025590[Sorghumbicolor] 175 1.02688e-41
whkp_14015_a01r 2012 3' Shoot grown under continuous light 273bp       PREDICTED:50SribosomalproteinL6,chloroplastic-like[Brachypodiumdistachyon] 101 1.24477e-19
whkp_15015_a01r 2012 3' Shoot grown under continuous light 353bp Contig2850       predictedprotein[Hordeumvulgaresubsp.vulgare] 231 6.16902e-59
whkp_16015_a01r 2012 3' Shoot grown under continuous light 239bp Contig23556       PREDICTED:proteintranslationfactorSUI1homologisoform1[Brachypodiumdistachyon] 43 0.0309376
whkp_18015_a01r 2012 3' Shoot grown under continuous light 36bp            
whkp_19015_a01r 2012 3' Shoot grown under continuous light 440bp Contig10585       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 1.81013e-79
whkp_2015_a01r 2012 3' Shoot grown under continuous light 64bp            
whkp_3015_a01r 2012 3' Shoot grown under continuous light 601bp Contig36816       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 3.03356e-76
whkp_4015_a01r 2012 3' Shoot grown under continuous light 652bp       rootperoxidase[Triticumaestivum] 291 9.9005e-77
whkp_5015_a01r 2012 3' Shoot grown under continuous light 421bp Contig5374       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.14225e-28
whkp_7015_a01r 2012 3' Shoot grown under continuous light 520bp Contig8864       PREDICTED:60SribosomalproteinL36a-likeisoform1[Brachypodiumdistachyon] 224 7.85512e-57
whkp_8015_a01r 2012 3' Shoot grown under continuous light 714bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 2.79908e-97
whkp_10015_a02r 2012 3' Shoot grown under continuous light 499bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 235 4.22974e-60
whkp_13015_a02r 2012 3' Shoot grown under continuous light 650bp Contig16196       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 4.97088e-36
whkp_14015_a02r 2012 3' Shoot grown under continuous light 614bp Contig13359       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 261 1.26657e-86
whkp_15015_a02r 2012 3' Shoot grown under continuous light 474bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 2.75801e-43
whkp_16015_a02r 2012 3' Shoot grown under continuous light 727bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 2.33189e-22
whkp_17015_a02r 2012 3' Shoot grown under continuous light 661bp Contig9834       S-adenosyl-L-methionine:phosphoethanolamineN-methyltransferase[Triticumaestivum] 360 1.79976e-97
whkp_18015_a02r 2012 3' Shoot grown under continuous light 687bp Contig7460       predictedprotein[Hordeumvulgaresubsp.vulgare] 285 8.01995e-75
whkp_19015_a02r 2012 3' Shoot grown under continuous light 151bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 99 2.83223e-19
whkp_20015_a02r 2012 3' Shoot grown under continuous light 691bp Contig33929       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 8.47977e-72
whkp_3015_a02r 2012 3' Shoot grown under continuous light 663bp Contig36311       RecName:Full=HistoneH2A.1;AltName:Full=wcH2A-9 283 2.82931e-74
whkp_4015_a02r 2012 3' Shoot grown under continuous light 626bp Contig13075       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 6.52832e-67
whkp_5015_a02r 2012 3' Shoot grown under continuous light 448bp Contig34292       predictedprotein[Hordeumvulgaresubsp.vulgare] 86 3.20505e-15
whkp_6015_a02r 2012 3' Shoot grown under continuous light 185bp            
whkp_7015_a02r 2012 3' Shoot grown under continuous light 716bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 433 3.39791e-119
whkp_8015_a02r 2012 3' Shoot grown under continuous light 368bp Contig20949       putativemembraneprotein[EscherichiacoliDEC6C] 53 2.94892e-05
whkp_9015_a02r 2012 3' Shoot grown under continuous light 318bp       PREDICTED:solutecarrierfamily25member44-like[Brachypodiumdistachyon] 140 1.8908e-31
whkp_10016_a03r 2012 3' Shoot grown under continuous light 612bp Contig17425       RecName:Full=FlavoneO-methyltransferase1;AltName:Full=CaffeicacidO-methyltransferase;Short=TaCOMT1 296 4.49348e-78
whkp_1016_a03r 2012 3' Shoot grown under continuous light 477bp Contig6570       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 1.59826e-83
whkp_14016_a03r 2012 3' Shoot grown under continuous light 712bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 490 1.77564e-136
whkp_15016_a03r 2012 3' Shoot grown under continuous light 585bp Contig18553       chloroplastMg-chelatasesubunitXANTHA-Gprecursor[Hordeumvulgare] 255 6.07639e-66
whkp_16016_a03r 2012 3' Shoot grown under continuous light 357bp Contig2386       predictedprotein[Hordeumvulgaresubsp.vulgare] 141 1.08806e-31
whkp_17016_a03r 2012 3' Shoot grown under continuous light 684bp Contig11744       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 4.24269e-84
whkp_19016_a03r 2012 3' Shoot grown under continuous light 650bp Contig35434       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 360 1.73549e-97
whkp_20016_a03r 2012 3' Shoot grown under continuous light 685bp       hypotheticalproteinBACCAP_00092[BacteroidescapillosusATCC29799] 37 3.76264
whkp_3016_a03r 2012 3' Shoot grown under continuous light 679bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 213 3.78892e-53
whkp_4016_a03r 2012 3' Shoot grown under continuous light 682bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 399 3.7279e-109
whkp_5016_a03r 2012 3' Shoot grown under continuous light 725bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 425 9.52826e-117
whkp_6016_a03r 2012 3' Shoot grown under continuous light 52bp Contig19962       PREDICTED:ran-bindingprotein1homologc-like[Brachypodiumdistachyon] 37 1.4321
whkp_7016_a03r 2012 3' Shoot grown under continuous light 769bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 152 1.34598e-34
whkp_8016_a03r 2012 3' Shoot grown under continuous light 709bp       lipoxygenase3[Triticumaestivum] 330 3.08614e-88
whkp_9016_a03r 2012 3' Shoot grown under continuous light 677bp Contig2000       hypotheticalproteinSORBIDRAFT_06g032450[Sorghumbicolor] 269 7.51465e-70
whkp_10016_a04r 2012 3' Shoot grown under continuous light 508bp Contig2387       defenderagainstcelldeath2[Triticumaestivum] 223 1.68234e-56
whkp_1016_a04r 2012 3' Shoot grown under continuous light 746bp       PREDICTED:transmembraneprotein87A-like[Brachypodiumdistachyon] 284 1.64254e-74
whkp_11016_a04r 2012 3' Shoot grown under continuous light 704bp       fructan:fructan1-fructosyltransferase[Triticumdurum] 326 5.7038e-87
whkp_12016_a04r 2012 3' Shoot grown under continuous light 466bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 2.53397e-36
whkp_13016_a04r 2012 3' Shoot grown under continuous light 501bp       ORF107c[Pinuskoraiensis] 104 1.02474e-28
whkp_14016_a04r 2012 3' Shoot grown under continuous light 651bp Contig13347       beta-amylase8[Hordeumvulgaresubsp.vulgare] 373 2.58733e-101
whkp_15016_a04r 2012 3' Shoot grown under continuous light 679bp Contig15959       PREDICTED:uncharacterizedproteinLOC100824820[Brachypodiumdistachyon] 334 1.47277e-89
whkp_16016_a04r 2012 3' Shoot grown under continuous light 684bp Contig11955       fructose-1,6-bisphosphatase,cytosolic,putative,expressed[Triticumaestivum] 396 3.22599e-108
whkp_18016_a04r 2012 3' Shoot grown under continuous light 388bp Contig5736       putativerubiscosmallsubunit[Triticumdurum] 134 1.01249e-29
whkp_20016_a04r 2012 3' Shoot grown under continuous light 218bp            
whkp_2016_a04r 2012 3' Shoot grown under continuous light 508bp Contig31882       PREDICTED:3-ketoacyl-CoAthiolase2,peroxisomal-like[Brachypodiumdistachyon] 257 8.0496e-67
whkp_3016_a04r 2012 3' Shoot grown under continuous light 624bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 2.54427e-47
whkp_6016_a04r 2012 3' Shoot grown under continuous light 40bp            
whkp_7016_a04r 2012 3' Shoot grown under continuous light 648bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 4.9756e-105
whkp_8016_a04r 2012 3' Shoot grown under continuous light 447bp       PREDICTED:uncharacterizedproteinLOC100830576[Brachypodiumdistachyon] 104 8.74568e-21
whkp_10031_a05r 2012 3' Shoot grown under continuous light 632bp Contig2388       PREDICTED:wiskott-Aldrichsyndromeprotein-like,partial[Bostaurus] 43 0.0434811
whkp_1031_a05r 2012 3' Shoot grown under continuous light 657bp Contig21282       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 9.7129e-112
whkp_11031_a05r 2012 3' Shoot grown under continuous light 743bp Contig6550       PREDICTED:inactivepoly[ADP-ribose]polymeraseRCD1-like[Brachypodiumdistachyon] 312 5.5815e-83
whkp_12031_a05r 2012 3' Shoot grown under continuous light 701bp Contig20940       ChainG,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 382 5.0826e-104
whkp_13031_a05r 2012 3' Shoot grown under continuous light 719bp Contig8492       14-3-3proteinhomologue[Hordeumvulgaresubsp.vulgare] 321 1.11418e-85
whkp_15031_a05r 2012 3' Shoot grown under continuous light 736bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 412 5.08178e-113
whkp_16031_a05r 2012 3' Shoot grown under continuous light 605bp Contig7137       stressresponsiveprotein[Triticumaestivum] 297 1.49962e-78
whkp_17031_a05r 2012 3' Shoot grown under continuous light 716bp Contig21219       60SribosomalproteinL5[Triticumaestivum] 416 4.29837e-114
whkp_18031_a05r 2012 3' Shoot grown under continuous light 554bp Contig27566       deltatonoplastintrinsicproteinTIP2;3[Triticumaestivum] 227 1.95035e-57
whkp_20031_a05r 2012 3' Shoot grown under continuous light 683bp Contig12084       glutamyltRNAreductase[Triticumaestivum] 304 2.1553e-80
whkp_2031_a05r 2012 3' Shoot grown under continuous light 237bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 49 0.000433173
whkp_4031_a05r 2012 3' Shoot grown under continuous light 625bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 243 3.51195e-81
whkp_8031_a05r 2012 3' Shoot grown under continuous light 728bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 331 1.89054e-88
whkp_9031_a05r 2012 3' Shoot grown under continuous light 609bp       PREDICTED:zinctransporterZTP29-like[Brachypodiumdistachyon] 196 3.65639e-48
whkp_1031_a06r 2012 3' Shoot grown under continuous light 385bp Contig16878       putativerubiscosmallsubunit[Triticumdurum] 210 1.45776e-52
whkp_11031_a06r 2012 3' Shoot grown under continuous light 744bp       GATA-typezincfingerprotein[Triticumaestivum] 369 6.56272e-100
whkp_13031_a06r 2012 3' Shoot grown under continuous light 690bp Contig24785       phosphoglucomutase[Triticumaestivum] 333 2.5959e-89
whkp_14031_a06r 2012 3' Shoot grown under continuous light 637bp Contig1506       S-adenosylmethioninedecarboxylaseprecursor[Triticumaestivum] 334 1.63214e-89
whkp_18031_a06r 2012 3' Shoot grown under continuous light 655bp Contig7551       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 5.03489e-76
whkp_20031_a06r 2012 3' Shoot grown under continuous light 33bp            
whkp_5031_a06r 2012 3' Shoot grown under continuous light 671bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 296 8.24933e-97
whkp_6031_a06r 2012 3' Shoot grown under continuous light 733bp