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complex contig list (2012)
Query Form
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How to use Virtual Display (2012)
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Related Sites
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cDNA
List
TSV (Separated by TAB)
FASTA
*1
Contig derived from a single library
*2
Contig derived from multiple libraries
Hit Count :
5467
First Previous 1-100
101-200
201-300
301-400
401-500
501-600
601-700
701-800
Next
Last
All
Accession
Clone
Registered year
Dir.
Tissue
Sequence
Contig
*1
Contig
*2
Homology (BLAST)
Swiss-Prot
nr
Top hit
GO ID
Term
Top hit (Definition)
score
E-Value
CJ589587
rwhsc2a02
2003
3'
Shoot grown with cold treatment
815bp
Wh_SHC_all.Contig1774
MUGEST2003_all.Contig25427
MUGEST2003_all.Contig25427
hypothetical protein [Secale cereale]
909
3.86518e-96
CJ589588
rwhsc2a03
2003
3'
Shoot grown with cold treatment
542bp
Wh_SHC_all.Contig1306
MUGEST2003_all.Contig21946
MUGEST2003_all.Contig21946
unknown [Zea mays]
541
7.25474e-54
CJ589589
rwhsc2a04
2003
3'
Shoot grown with cold treatment
647bp
Wh_SHC_all.Contig2284
MUGEST2003_all.Contig18950
MUGEST2003_all.Contig18950
Os09g0458900 [Oryza sativa (japonica cultivar-group)]
208
4.68066e-15
CJ589590
rwhsc2a05
2003
3'
Shoot grown with cold treatment
723bp
Wh_SHC_all.Contig2042
MUGEST2003_all.Contig11454
MUGEST2003_all.Contig11454
hypothetical protein OsJ_007392 [Oryza sativa (japonica cultivar-group)]
701
4.00487e-72
CJ589591
rwhsc2a07
2003
3'
Shoot grown with cold treatment
656bp
Wh_SHC_all.Contig1305
MUGEST2003_all.Contig23564
MUGEST2003_all.Contig23564
unknown [Zea mays]
472
1.18209e-45
CJ589592
rwhsc2a08
2003
3'
Shoot grown with cold treatment
105bp
rwhsc2a08
CJ589593
rwhsc2a10
2003
3'
Shoot grown with cold treatment
467bp
Wh_SHC_all.Contig2281
MUGEST2003_all.Contig24532
MUGEST2003_all.Contig24532
translation initiation factor eIF1 [synthetic construct]
363
2.32135e-33
CJ589594
rwhsc2a12
2003
3'
Shoot grown with cold treatment
267bp
Wh_SHC_all.Contig1304
MUGEST2003_all.Contig7762
MUGEST2003_all.Contig7762
PREDICTED: similar to cytochrome P450 2P3 [Strongylocentrotus purpuratus]
74
7.46048
CJ589595
rwhsc2a13
2003
3'
Shoot grown with cold treatment
717bp
Wh_SHC_all.Contig1433
MUGEST2003_all.Contig16153
MUGEST2003_all.Contig16153
Os11g0614400 [Oryza sativa (japonica cultivar-group)]
619
1.27947e-62
CJ589596
rwhsc2a14
2003
3'
Shoot grown with cold treatment
479bp
Wh_SHC_all.Contig2485
MUGEST2003_all.Contig23186
MUGEST2003_all.Contig23186
thioredoxin h [Triticum aestivum]
252
1.69534e-20
CJ589597
rwhsc2a15
2003
3'
Shoot grown with cold treatment
834bp
rwhsc2a15
MUGEST2003_all.Contig21990
MUGEST2003_all.Contig21990
putative MAPK protein kinase [Triticum aestivum]
790
2.50794e-82
CJ589598
rwhsc2a17
2003
3'
Shoot grown with cold treatment
187bp
Wh_SHC_all.Contig2156
MUGEST2003_all.Contig16139
MUGEST2003_all.Contig16139
CJ589599
rwhsc2a18
2003
3'
Shoot grown with cold treatment
637bp
Wh_SHC_all.Contig1729
MUGEST2003_all.Contig24855
MUGEST2003_all.Contig24855
putative ribosomal protein L26 [Oryza sativa Japonica Group]
399
3.21493e-37
CJ589600
rwhsc2a20
2003
3'
Shoot grown with cold treatment
830bp
Wh_SHC_all.Contig1461
MUGEST2003_all.Contig19170
MUGEST2003_all.Contig19170
tryptophan synthase beta-subunit [Sorghum bicolor]
1092
2.38446e-117
CJ589601
rwhsc2a23
2003
3'
Shoot grown with cold treatment
741bp
Wh_SHC_all.Contig1680
MUGEST2003_all.Contig21185
MUGEST2003_all.Contig21185
Targeting protein for Xklp2 containing protein, expressed [Oryza sativa (japonica cultivar-group)]
454
1.84989e-43
CJ589602
rwhsc2a24
2003
3'
Shoot grown with cold treatment
530bp
Wh_SHC_all.Contig2509
MUGEST2003_all.Contig25265
MUGEST2003_all.Contig25265
acidic ribosomal protein P2 [Triticum aestivum]
312
2.46513e-27
CJ589603
rwhsc2b01
2003
3'
Shoot grown with cold treatment
656bp
Wh_SHC_all.Contig2530
MUGEST2003_all.Contig25234
MUGEST2003_all.Contig25234
gamma-thionin
356
3.33901e-32
CJ589604
rwhsc2b02
2003
3'
Shoot grown with cold treatment
158bp
Wh_SHC_all.Contig1751
MUGEST2003_all.Contig14846
MUGEST2003_all.Contig14846
CJ589605
rwhsc2b03
2003
3'
Shoot grown with cold treatment
758bp
Wh_SHC_all.Contig2527
MUGEST2003_all.Contig25364
MUGEST2003_all.Contig25364
cyclophilin A-1 [Triticum aestivum]
577
1.06309e-57
CJ589606
rwhsc2b04
2003
3'
Shoot grown with cold treatment
827bp
Wh_SHC_all.Contig1219
MUGEST2003_all.Contig24992
MUGEST2003_all.Contig24992
Os01g0276100 [Oryza sativa (japonica cultivar-group)]
1000
1.10243e-106
CJ589607
rwhsc2b05
2003
3'
Shoot grown with cold treatment
821bp
Wh_SHC_all.Contig1220
MUGEST2003_all.Contig21530
MUGEST2003_all.Contig21530
erythrocyte binding protein [Plasmodium vivax SaI-1]
97
0.0562542
CJ589608
rwhsc2b07
2003
3'
Shoot grown with cold treatment
325bp
Wh_SHC_all.Contig2402
MUGEST2003_all.Contig25281
MUGEST2003_all.Contig25281
ubiquitin
210
1.27096e-15
CJ589609
rwhsc2b09
2003
3'
Shoot grown with cold treatment
863bp
Wh_SHC_all.Contig2201
MUGEST2003_all.Contig24610
MUGEST2003_all.Contig24610
hypothetical protein OsJ_025258 [Oryza sativa (japonica cultivar-group)]
1259
1.10871e-136
CJ589610
rwhsc2b12
2003
3'
Shoot grown with cold treatment
603bp
Wh_SHC_all.Contig1492
MUGEST2003_all.Contig24856
MUGEST2003_all.Contig24856
Profilin-1
581
2.23517e-58
CJ589611
rwhsc2b13
2003
3'
Shoot grown with cold treatment
418bp
Wh_SHC_all.Contig1467
MUGEST2003_all.Contig11464
MUGEST2003_all.Contig11464
OSIGBa0125M19.7 [Oryza sativa (indica cultivar-group)]
284
3.28412e-24
CJ589612
rwhsc2b14
2003
3'
Shoot grown with cold treatment
760bp
Wh_SHC_all.Contig1302
MUGEST2003_all.Contig7749
MUGEST2003_all.Contig7749
PHD zinc finger protein [Triticum aestivum]
425
4.5243e-40
CJ589613
rwhsc2b15
2003
3'
Shoot grown with cold treatment
120bp
rwhsc2b15
BC006779 protein [Mus musculus]
75
5.74541
CJ589614
rwhsc2b16
2003
3'
Shoot grown with cold treatment
688bp
Wh_SHC_all.Contig1785
MUGEST2003_all.Contig18871
MUGEST2003_all.Contig18871
ferritin 1 [Hordeum vulgare]
792
1.02509e-82
CJ589615
rwhsc2b18
2003
3'
Shoot grown with cold treatment
503bp
Wh_SHC_all.Contig1745
MUGEST2003_all.Contig14850
MUGEST2003_all.Contig14850
hypothetical protein OsJ_011039 [Oryza sativa (japonica cultivar-group)]
553
2.36677e-55
CJ589616
rwhsc2b20
2003
3'
Shoot grown with cold treatment
733bp
Wh_SHC_all.Contig2044
MUGEST2003_all.Contig19236
MUGEST2003_all.Contig19236
Os06g0667600 [Oryza sativa (japonica cultivar-group)]
651
2.60659e-66
CJ589617
rwhsc2b22
2003
3'
Shoot grown with cold treatment
111bp
rwhsc2b22
unnamed protein product [Vitis vinifera]
107
0.00112542
CJ589618
rwhsc2b23
2003
3'
Shoot grown with cold treatment
820bp
Wh_SHC_all.Contig2401
MUGEST2003_all.Contig25187
MUGEST2003_all.Contig25187
unknown [Zea mays]
614
6.31799e-62
CJ589619
rwhsc2b24
2003
3'
Shoot grown with cold treatment
778bp
Wh_SHC_all.Contig2401
MUGEST2003_all.Contig25187
MUGEST2003_all.Contig25187
hypothetical protein OsI_011990 [Oryza sativa (indica cultivar-group)]
610
1.64269e-61
CJ589620
rwhsc2c01
2003
3'
Shoot grown with cold treatment
561bp
Wh_SHC_all.Contig2417
MUGEST2003_all.Contig25294
MUGEST2003_all.Contig25294
triosephosphat-isomerase [Triticum aestivum]
594
5.73714e-60
CJ589621
rwhsc2c02
2003
3'
Shoot grown with cold treatment
418bp
Wh_SHC_all.Contig2147
MUGEST2003_all.Contig24962
MUGEST2003_all.Contig24962
unnamed protein product [Vitis vinifera]
500
2.94977e-49
CJ589622
rwhsc2c03
2003
3'
Shoot grown with cold treatment
202bp
rwhsc2c03
unknown [Zea mays]
125
9.08484e-06
CJ589623
rwhsc2c04
2003
3'
Shoot grown with cold treatment
613bp
Wh_SHC_all.Contig2400
MUGEST2003_all.Contig24398
MUGEST2003_all.Contig24398
Histone H2B.2
459
3.21927e-44
CJ589624
rwhsc2c07
2003
3'
Shoot grown with cold treatment
258bp
Wh_SHC_all.Contig2454
MUGEST2003_all.Contig23142
MUGEST2003_all.Contig23142
germin-like protein 1a [Hordeum vulgare subsp. vulgare]
373
1.61345e-34
CJ589625
rwhsc2c09
2003
3'
Shoot grown with cold treatment
583bp
rwhsc2c09
MUGEST2003_all.Contig19209
MUGEST2003_all.Contig19209
Os12g0506400 [Oryza sativa (japonica cultivar-group)]
587
4.15255e-59
CJ589626
rwhsc2c11
2003
3'
Shoot grown with cold treatment
118bp
rwhsc2c11
unknown [Zea mays]
84
0.519651
CJ589627
rwhsc2c12
2003
3'
Shoot grown with cold treatment
364bp
rwhsc2c12
MUGEST2003_all.Contig20010
MUGEST2003_all.Contig20010
Os05g0362300 [Oryza sativa (japonica cultivar-group)]
253
1.29295e-20
CJ589628
rwhsc2c13
2003
3'
Shoot grown with cold treatment
536bp
Wh_SHC_all.Contig2479
MUGEST2003_all.Contig25152
MUGEST2003_all.Contig25152
putative ribosomal protein S18 [Triticum aestivum]
535
3.46714e-53
CJ589629
rwhsc2c14
2003
3'
Shoot grown with cold treatment
383bp
Wh_SHC_all.Contig2479
MUGEST2003_all.Contig25152
MUGEST2003_all.Contig25152
putative ribosomal protein S18 [Triticum aestivum]
439
3.53264e-42
CJ589630
rwhsc2c15
2003
3'
Shoot grown with cold treatment
776bp