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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download  -------------------------- How to Order Resources MTA Sample

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 10788
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxd_10015_a01f 2012 5' Root, treated at 50 microM Al for 6h 568bp Contig26571       PREDICTED:V-typeprotonATPase16kDaproteolipidsubunit-like[Brachypodiumdistachyon] 307 1.21702e-81
whxd_1015_a01f 2012 5' Root, treated at 50 microM Al for 6h 673bp Contig7398       predictedprotein[Hordeumvulgaresubsp.vulgare] 419 3.40377e-115
whxd_11015_a01f 2012 5' Root, treated at 50 microM Al for 6h 565bp Contig3879       predictedprotein[Hordeumvulgaresubsp.vulgare] 391 8.2594e-107
whxd_12015_a01f 2012 5' Root, treated at 50 microM Al for 6h 437bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 2.22224e-77
whxd_16015_a01f 2012 5' Root, treated at 50 microM Al for 6h 43bp       hypotheticalproteinOsJ_02439[OryzasativaJaponicaGroup] 34 8.12226
whxd_17015_a01f 2012 5' Root, treated at 50 microM Al for 6h 487bp Contig26886       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 7.01939e-87
whxd_19015_a01f 2012 5' Root, treated at 50 microM Al for 6h 329bp       P450monooxygenase[Hordeumvulgaresubsp.vulgare] 132 3.88413e-29
whxd_2015_a01f 2012 5' Root, treated at 50 microM Al for 6h 31bp            
whxd_25015_a01f 2012 5' Root, treated at 50 microM Al for 6h 388bp Contig1463       PREDICTED:5-methyltetrahydropteroyltriglutamate--homocysteinemethyltransferase-like[Brachypodiumdistachyon] 264 6.5133e-69
whxd_26015_a01f 2012 5' Root, treated at 50 microM Al for 6h 395bp       DNApolymeraseIIIgammasubunit[RhodococcusimtechensisRKJ300] 49 0.000439177
whxd_27015_a01f 2012 5' Root, treated at 50 microM Al for 6h 419bp Contig36431       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 4.31848e-60
whxd_28015_a01f 2012 5' Root, treated at 50 microM Al for 6h 346bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 233 1.63597e-59
whxd_29015_a01f 2012 5' Root, treated at 50 microM Al for 6h 218bp Contig20400            
whxd_30015_a01f 2012 5' Root, treated at 50 microM Al for 6h 307bp Contig18881       aleuroneribonuclease[Hordeumvulgaresubsp.vulgare] 210 1.45732e-52
whxd_3015_a01f 2012 5' Root, treated at 50 microM Al for 6h 567bp Contig3227       RecName:Full=HMG1/2-likeprotein 310 1.44447e-82
whxd_33015_a01f 2012 5' Root, treated at 50 microM Al for 6h 615bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.098e-107
whxd_34015_a01f 2012 5' Root, treated at 50 microM Al for 6h 284bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 36 2.85232
whxd_35015_a01f 2012 5' Root, treated at 50 microM Al for 6h 281bp       conservedhypotheticalprotein[Trichinellaspiralis] 35 8.32874
whxd_36015_a01f 2012 5' Root, treated at 50 microM Al for 6h 602bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.68236e-90
whxd_37015_a01f 2012 5' Root, treated at 50 microM Al for 6h 569bp Contig10223       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.39892e-61
whxd_38015_a01f 2012 5' Root, treated at 50 microM Al for 6h 350bp Contig10224       PREDICTED:ras-relatedproteinRIC2-like[Brachypodiumdistachyon] 48 0.000743512
whxd_39015_a01f 2012 5' Root, treated at 50 microM Al for 6h 593bp Contig12508       NADPH-cytochromeP450reductase[Triticumaestivum] 375 4.15878e-102
whxd_40015_a01f 2012 5' Root, treated at 50 microM Al for 6h 641bp       hypotheticalprotein[OryzasativaJaponicaGroup] 141 1.5935e-31
whxd_5015_a01f 2012 5' Root, treated at 50 microM Al for 6h 562bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.04967e-85
whxd_6015_a01f 2012 5' Root, treated at 50 microM Al for 6h 650bp       PREDICTED:polyubiquitin11-like[Brachypodiumdistachyon] 272 4.75918e-71
whxd_7015_a01f 2012 5' Root, treated at 50 microM Al for 6h 110bp Contig10225            
whxd_8015_a01f 2012 5' Root, treated at 50 microM Al for 6h 424bp       AlcoholdehydrogenaseGroESdomainprotein[LeptonemailliniDSM21528] 41 0.11903
whxd_9015_a01f 2012 5' Root, treated at 50 microM Al for 6h 478bp Contig6481       heatshockprotein70[Triticumaestivum] 306 1.48921e-81
whxd_10015_a02f 2012 5' Root, treated at 50 microM Al for 6h 416bp       putativeacyltransferase3[Triticumaestivum] 178 6.09083e-43
whxd_1015_a02f 2012 5' Root, treated at 50 microM Al for 6h 523bp Contig10349       PREDICTED:uncharacterizedproteinLOC100843401[Brachypodiumdistachyon] 106 3.11772e-21
whxd_11015_a02f 2012 5' Root, treated at 50 microM Al for 6h 416bp       putativeacyltransferase3[Triticumaestivum] 178 6.09083e-43
whxd_12015_a02f 2012 5' Root, treated at 50 microM Al for 6h 564bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 3.13133e-61
whxd_13015_a02f 2012 5' Root, treated at 50 microM Al for 6h 603bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 8.06837e-93
whxd_15015_a02f 2012 5' Root, treated at 50 microM Al for 6h 460bp       unnamedproteinproduct[Tetraodonnigroviridis] 35 6.37556
whxd_16015_a02f 2012 5' Root, treated at 50 microM Al for 6h 541bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 5.73126e-86
whxd_18015_a02f 2012 5' Root, treated at 50 microM Al for 6h 504bp Contig457       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 5.39951e-79
whxd_19015_a02f 2012 5' Root, treated at 50 microM Al for 6h 624bp Contig1888       3-ketoacyl-CoAthiolase-likeprotein[Triticumaestivum] 391 8.31406e-107
whxd_2015_a02f 2012 5' Root, treated at 50 microM Al for 6h 410bp Contig10349       putativeDNArepairproteinrad10domain-containingprotein[NeosporacaninumLiverpool] 43 0.0236103
whxd_26015_a02f 2012 5' Root, treated at 50 microM Al for 6h 344bp       PREDICTED:uncharacterizedproteinLOC100839880[Brachypodiumdistachyon] 160 1.76684e-37
whxd_27015_a02f 2012 5' Root, treated at 50 microM Al for 6h 242bp Contig22471            
whxd_28015_a02f 2012 5' Root, treated at 50 microM Al for 6h 392bp Contig7558       SEC13[Triticumaestivum] 254 8.73223e-66
whxd_29015_a02f 2012 5' Root, treated at 50 microM Al for 6h 346bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 231 6.24051e-59
whxd_30015_a02f 2012 5' Root, treated at 50 microM Al for 6h 381bp Contig32079       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 6.38891e-48
whxd_3015_a02f 2012 5' Root, treated at 50 microM Al for 6h 597bp Contig22104       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.55653e-107
whxd_31015_a02f 2012 5' Root, treated at 50 microM Al for 6h 621bp Contig9023       predictedprotein[Hordeumvulgaresubsp.vulgare] 315 5.71845e-84
whxd_32015_a02f 2012 5' Root, treated at 50 microM Al for 6h 564bp Contig8436       cytosolicglutaminesynthetaseisoform[Triticumturgidumsubsp.durumxSecalecereale] 367 1.2772e-99
whxd_34015_a02f 2012 5' Root, treated at 50 microM Al for 6h 606bp Contig2394       Chain4,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 297 1.95857e-78
whxd_35015_a02f 2012 5' Root, treated at 50 microM Al for 6h 46bp Contig9357       Chain4,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 37 0.787101
whxd_36015_a02f 2012 5' Root, treated at 50 microM Al for 6h 618bp Contig10092       calmodulin[Zeamays] 295 7.88688e-78
whxd_37015_a02f 2012 5' Root, treated at 50 microM Al for 6h 353bp Contig26567       superoxidedismutase[Triticumaestivum] 244 9.19702e-63
whxd_38015_a02f 2012 5' Root, treated at 50 microM Al for 6h 611bp Contig8898       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 2.89239e-101
whxd_39015_a02f 2012 5' Root, treated at 50 microM Al for 6h 660bp Contig10226       unnamedproteinproduct[HaliangiumochraceumDSM14365] 49 0.000887503
whxd_4015_a02f 2012 5' Root, treated at 50 microM Al for 6h 344bp Contig9303       Os07g0139600[OryzasativaJaponicaGroup] 59 4.24456e-07
whxd_5015_a02f 2012 5' Root, treated at 50 microM Al for 6h 548bp Contig1956       alpha-tubulin[Alopecurusaequalis] 378 6.57781e-103
whxd_6015_a02f 2012 5' Root, treated at 50 microM Al for 6h 579bp Contig8488       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 4.71932e-76
whxd_7015_a02f 2012 5' Root, treated at 50 microM Al for 6h 542bp Contig4442       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 227 1.41385e-57
whxd_8015_a02f 2012 5' Root, treated at 50 microM Al for 6h 534bp       ferrochelatase[Hordeumvulgare] 173 2.27453e-41
whxd_10016_a03f 2012 5' Root, treated at 50 microM Al for 6h 588bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 1.31693e-100
whxd_1016_a03f 2012 5' Root, treated at 50 microM Al for 6h 602bp Contig26888       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 375 5.57458e-102
whxd_13016_a03f 2012 5' Root, treated at 50 microM Al for 6h 36bp            
whxd_14016_a03f 2012 5' Root, treated at 50 microM Al for 6h 614bp Contig23668       C2H2Znfingerprotein[Triticumaestivum] 228 8.93802e-58
whxd_19016_a03f 2012 5' Root, treated at 50 microM Al for 6h 283bp Contig5983            
whxd_20016_a03f 2012 5' Root, treated at 50 microM Al for 6h 105bp Contig23668            
whxd_2016_a03f 2012 5' Root, treated at 50 microM Al for 6h 77bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 52 5.14668e-05
whxd_26016_a03f 2012 5' Root, treated at 50 microM Al for 6h 370bp Contig10227       RecName:Full=Mitochondrialoutermembraneporin;AltName:Full=Voltage-dependentanion-selectivechannelprotein;Short=VDAC 67 2.03324e-09
whxd_27016_a03f 2012 5' Root, treated at 50 microM Al for 6h 181bp Contig10228            
whxd_28016_a03f 2012 5' Root, treated at 50 microM Al for 6h 72bp Contig24070            
whxd_30016_a03f 2012 5' Root, treated at 50 microM Al for 6h 369bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 162 3.45129e-38
whxd_3016_a03f 2012 5' Root, treated at 50 microM Al for 6h 512bp Contig26237       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 2.09379e-91
whxd_31016_a03f 2012 5' Root, treated at 50 microM Al for 6h 56bp Contig30831            
whxd_33016_a03f 2012 5' Root, treated at 50 microM Al for 6h 500bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 2.04272e-22
whxd_34016_a03f 2012 5' Root, treated at 50 microM Al for 6h 474bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 2.06411e-22
whxd_35016_a03f 2012 5' Root, treated at 50 microM Al for 6h 595bp       wali2[Triticumaestivum] 392 4.2937e-107
whxd_36016_a03f 2012 5' Root, treated at 50 microM Al for 6h 609bp       PREDICTED:pairedamphipathichelixproteinSin3-like4-like[Brachypodiumdistachyon] 316 2.42429e-84
whxd_38016_a03f 2012 5' Root, treated at 50 microM Al for 6h 595bp Contig2356       predictedprotein[Hordeumvulgaresubsp.vulgare] 247 1.32831e-63
whxd_39016_a03f 2012 5' Root, treated at 50 microM Al for 6h 587bp Contig17956       predictedprotein[Hordeumvulgaresubsp.vulgare] 383 1.93217e-104
whxd_40016_a03f 2012 5' Root, treated at 50 microM Al for 6h 542bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 7.48126e-36
whxd_4016_a03f 2012 5' Root, treated at 50 microM Al for 6h 513bp Contig26237       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 3.34279e-89
whxd_6016_a03f 2012 5' Root, treated at 50 microM Al for 6h 477bp Contig8838       benzoxazinone:UDP-Glcglucosyltransferase[Triticumaestivum] 271 5.33289e-71
whxd_7016_a03f 2012 5' Root, treated at 50 microM Al for 6h 549bp Contig3064       PREDICTED:putativemitochondrial2-oxoglutarate/malatecarrierprotein-like[Brachypodiumdistachyon] 341 5.22401e-92
whxd_8016_a03f 2012 5' Root, treated at 50 microM Al for 6h 460bp Contig8174       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 2.14599e-72
whxd_9016_a03f 2012 5' Root, treated at 50 microM Al for 6h 600bp Contig6696       universalstressprotein3739[Hordeumvulgaresubsp.vulgare] 258 9.93178e-67
whxd_10016_a04f 2012 5' Root, treated at 50 microM Al for 6h 574bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 1.74666e-107
whxd_1016_a04f 2012 5' Root, treated at 50 microM Al for 6h 208bp       hypotheticalproteinSMAC_06268[Sordariamacrosporak-hell] 36 4.91551
whxd_12016_a04f 2012 5' Root, treated at 50 microM Al for 6h 335bp       PREDICTED:uncharacterizedproteinLOC100826953[Brachypodiumdistachyon] 117 1.28328e-24
whxd_13016_a04f 2012 5' Root, treated at 50 microM Al for 6h 181bp Contig24772            
whxd_14016_a04f 2012 5' Root, treated at 50 microM Al for 6h 306bp Contig4481       Os06g0598900[OryzasativaJaponicaGroup] 217 1.19216e-54
whxd_15016_a04f 2012 5' Root, treated at 50 microM Al for 6h 473bp       PREDICTED:sugartransportprotein13-likeisoform1[Brachypodiumdistachyon] 264 1.11696e-68
whxd_16016_a04f 2012 5' Root, treated at 50 microM Al for 6h 550bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 192 3.99778e-47
whxd_17016_a04f 2012 5' Root, treated at 50 microM Al for 6h 579bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 1.90273e-101
whxd_18016_a04f 2012 5' Root, treated at 50 microM Al for 6h 530bp       retrotransposonprotein,putative,unclassified[OryzasativaJaponicaGroup] 81 1.50293e-13
whxd_19016_a04f 2012 5' Root, treated at 50 microM Al for 6h 126bp Contig18841            
whxd_25016_a04f 2012 5' Root, treated at 50 microM Al for 6h 293bp Contig25190       PREDICTED:H/ACAribonucleoproteincomplexsubunit3-likeprotein-like[Brachypodiumdistachyon] 51 0.000114805
whxd_26016_a04f 2012 5' Root, treated at 50 microM Al for 6h 395bp Contig16645       stressresponseprotein[Triticumaestivum] 207 1.64581e-51
whxd_27016_a04f 2012 5' Root, treated at 50 microM Al for 6h 37bp            
whxd_29016_a04f 2012 5' Root, treated at 50 microM Al for 6h 359bp Contig20992       glutathionetransferase[Triticumaestivum] 249 3.70509e-64
whxd_30016_a04f 2012 5' Root, treated at 50 microM Al for 6h 330bp Contig5448       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.61446e-51
whxd_3016_a04f 2012 5' Root, treated at 50 microM Al for 6h 535bp Contig24120       Methyltransferasedomaincontainingprotein,expressed[Triticumaestivum] 303 1.94469e-80
whxd_31016_a04f 2012 5' Root, treated at 50 microM Al for 6h 516bp Contig28765       bluecopperprotein[Triticumaestivum] 205 6.47121e-51
whxd_32016_a04f 2012 5' Root, treated at 50 microM Al for 6h 45bp Contig29151            
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