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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download  -------------------------- How to Order Resources MTA Sample

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4994
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_20001_a01f 2012 5' Crown of seedling 587bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 6.02028e-98
whdl_21001_a01f 2012 5' Crown of seedling 45bp Contig10085            
whdl_1001_a01f 2012 5' Crown of seedling 391bp       PREDICTED:uncharacterizedproteinLOC100831207[Brachypodiumdistachyon] 48 0.000950431
whdl_11001_a01f 2012 5' Crown of seedling 397bp Contig12983       PREDICTED:prefoldinsubunit6-like[Brachypodiumdistachyon] 96 4.09155e-18
whdl_13001_a01f 2012 5' Crown of seedling 307bp Contig36294       PREDICTED:histoneH4-like[Glycinemax] 197 1.27199e-48
whdl_14001_a01f 2012 5' Crown of seedling 425bp Contig8655       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 240 1.73866e-61
whdl_2001_a01f 2012 5' Crown of seedling 395bp       mitochondrialATPsynthaseprecursor[Triticumaestivum] 178 8.18703e-43
whdl_2002_a01f 2012 5' Crown of seedling 355bp       mitochondrialATPsynthaseprecursor[Triticumaestivum] 67 2.00454e-09
whdl_23002_a01f 2012 5' Crown of seedling 332bp       PREDICTED:abscisicstress-ripeningprotein3-like[Brachypodiumdistachyon] 145 5.76883e-33
whdl_24002_a01f 2012 5' Crown of seedling 386bp Contig9367       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit10-B-like[Brachypodiumdistachyon] 228 5.17278e-58
whdl_26001_a01f 2012 5' Crown of seedling 523bp Contig783       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 4.879e-54
whdl_3001_a01f 2012 5' Crown of seedling 373bp Contig331       Chaint,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 211 6.64876e-53
whdl_4001_a01f 2012 5' Crown of seedling 391bp Contig36208       Os11g0211800[OryzasativaJaponicaGroup] 172 4.36402e-41
whdl_9017_a02f 2012 5' Crown of seedling 229bp Contig35       PREDICTED:CHD3-typechromatin-remodelingfactorPICKLE-like[Brachypodiumdistachyon] 121 6.9145e-26
whdl_1017_a02f 2012 5' Crown of seedling 401bp Contig6061       elongationfactor1alpha[Hordeumbrevisubulatum] 269 2.05077e-70
whdl_13017_a02f 2012 5' Crown of seedling 489bp Contig2272       ChainK,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 289 1.90729e-76
whdl_18017_a02f 2012 5' Crown of seedling 626bp       PREDICTED:ATP-citratesynthasebetachainprotein1-like[Brachypodiumdistachyon] 386 2.07588e-105
whdl_2018_a02f 2012 5' Crown of seedling 336bp       hypotheticalproteinOsJ_11897[OryzasativaJaponicaGroup] 52 6.62138e-05
whdl_23018_a02f 2012 5' Crown of seedling 298bp Contig11304       PREDICTED:cytochromeb5-like[Brachypodiumdistachyon] 161 1.02135e-37
whdl_24018_a02f 2012 5' Crown of seedling 325bp Contig15462       PREDICTED:heatshockcognate70kDaprotein-like[Brachypodiumdistachyon] 187 1.02124e-45
whdl_25017_a02f 2012 5' Crown of seedling 550bp Contig355       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.50537e-94
whdl_4017_a02f 2012 5' Crown of seedling 158bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 9.05401e-18
whdl_5017_a02f 2012 5' Crown of seedling 388bp Contig373       Os07g0139600[OryzasativaJaponicaGroup] 57 2.05435e-06
whdl_6017_a02f 2012 5' Crown of seedling 450bp       dolichyl-diphosphooligosaccharide--proteinglycosyltransferase,putative,expressed[Triticumaestivum] 286 2.11031e-75
whdl_8017_a02f 2012 5' Crown of seedling 288bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 86 4.23634e-15
whdl_16033_a03f 2012 5' Crown of seedling 257bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 71 1.40881e-10
whdl_20033_a03f 2012 5' Crown of seedling 587bp       hypotheticalproteinSORBIDRAFT_08g016570[Sorghumbicolor] 222 5.70053e-56
whdl_21033_a03f 2012 5' Crown of seedling 580bp Contig336       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 5.37461e-88
whdl_1033_a03f 2012 5' Crown of seedling 416bp Contig3200       RecName:Full=70kDapeptidyl-prolylisomerase;AltName:Full=Peptidyl-prolylcis-transisomerase;Short=PPIase;AltName:Full=Rotamase 269 3.42665e-70
whdl_12033_a03f 2012 5' Crown of seedling 572bp Contig6148       cyc07[Triticumaestivum] 329 3.9757e-88
whdl_13033_a03f 2012 5' Crown of seedling 574bp Contig5055       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 2.49022e-90
whdl_14033_a03f 2012 5' Crown of seedling 507bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 4.16313e-55
whdl_17033_a03f 2012 5' Crown of seedling 265bp Contig122       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 5.14851e-28
whdl_18033_a03f 2012 5' Crown of seedling 444bp Contig338       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 5.98475e-78
whdl_19033_a03f 2012 5' Crown of seedling 228bp Contig12266       RecName:Full=DehydrinCOR410;AltName:Full=Cold-inducedCOR410protein 109 2.72824e-22
whdl_23034_a03f 2012 5' Crown of seedling 489bp       PREDICTED:shikimatekinase,chloroplastic-like[Brachypodiumdistachyon] 252 4.42736e-65
whdl_26033_a03f 2012 5' Crown of seedling 565bp Contig614       reversiblyglycosylatedpolypeptide[Triticumaestivum] 390 1.09832e-106
whdl_5033_a03f 2012 5' Crown of seedling 431bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.0411e-74
whdl_7033_a03f 2012 5' Crown of seedling 210bp Contig3306       PREDICTED:T-complexprotein1subunitzeta-like[Glycinemax] 130 2.50122e-28
whdl_8033_a03f 2012 5' Crown of seedling 288bp Contig6061       elongationfactor1alpha[Hordeumbrevisubulatum] 196 2.90667e-48
whdl_15049_a04f 2012 5' Crown of seedling 40bp Contig70            
whdl_16049_a04f 2012 5' Crown of seedling 336bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 9.06236e-51
whdl_20049_a04f 2012 5' Crown of seedling 450bp Contig698       PREDICTED:uncharacterizedproteinLOC100828544[Brachypodiumdistachyon] 292 2.25467e-77
whdl_11049_a04f 2012 5' Crown of seedling 293bp       PREDICTED:UDP-glucuronate4-epimerase1-like[Brachypodiumdistachyon] 98 1.06957e-18
whdl_12049_a04f 2012 5' Crown of seedling 429bp Contig23497       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 1.16672e-41
whdl_13049_a04f 2012 5' Crown of seedling 406bp Contig9084       RecName:Full=ADP,ATPcarrierprotein1,mitochondrial;AltName:Full=ADP/ATPtranslocase1;AltName:Full=Adeninenucleotidetranslocator1;Short=ANT1;Flags:Precursor 164 1.20357e-38
whdl_14049_a04f 2012 5' Crown of seedling 437bp Contig187       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 8.4445e-77
whdl_17049_a04f 2012 5' Crown of seedling 598bp Contig1638       PREDICTED:smallnuclearribonucleoproteinSmD3-like[Brachypodiumdistachyon] 264 1.04504e-68
whdl_19049_a04f 2012 5' Crown of seedling 67bp       60SribosomalproteinL31B[Heveabrasiliensis] 40 0.222034
whdl_22049_a04f 2012 5' Crown of seedling 544bp Contig9033       PREDICTED:proteinmagonashihomolog[Brachypodiumdistachyon] 326 2.2364e-87
whdl_23050_a04f 2012 5' Crown of seedling 234bp Contig37067       PREDICTED:macrodomain-containingproteinVPA0103-like[Brachypodiumdistachyon] 143 2.88852e-32
whdl_3049_a04f 2012 5' Crown of seedling 378bp       PREDICTED:proteasomesubunitbetatype-3-like[Brachypodiumdistachyon] 203 1.38087e-50
whdl_6049_a04f 2012 5' Crown of seedling 440bp Contig3783       unnamedproteinproduct[Vitisvinifera] 307 6.64694e-82
whdl_8049_a04f 2012 5' Crown of seedling 477bp Contig8873       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 2.38275e-87
whdl_16065_a05f 2012 5' Crown of seedling 517bp Contig10002       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 1.13173e-79
whdl_1065_a05f 2012 5' Crown of seedling 525bp Contig2140       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 2.1749e-78
whdl_17065_a05f 2012 5' Crown of seedling 223bp Contig2443       putativeproteinaseinhibitor-relatedprotein[Triticumaestivum] 167 1.88696e-39
whdl_18065_a05f 2012 5' Crown of seedling 199bp       PREDICTED:uncharacterizedproteinLOC100829075[Brachypodiumdistachyon] 64 1.30339e-08
whdl_19065_a05f 2012 5' Crown of seedling 521bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 1.67153e-99
whdl_22065_a05f 2012 5' Crown of seedling 387bp       histoneH4[Zeamays] 133 2.95779e-29
whdl_23066_a05f 2012 5' Crown of seedling 286bp Contig4189       lipidtransferproteinprecursor[Triticumaestivum] 46 0.00371983
whdl_5065_a05f 2012 5' Crown of seedling 366bp Contig4901       26Sproteaseregulatorysubunit-likeprotein[Loliumperenne] 220 1.82874e-55
whdl_7065_a05f 2012 5' Crown of seedling 394bp Contig36523       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.63819e-67
whdl_16081_a06f 2012 5' Crown of seedling 521bp Contig9289       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 5.82547e-52
whdl_20081_a06f 2012 5' Crown of seedling 566bp Contig14664       hypotheticalproteinSORBIDRAFT_06g019490[Sorghumbicolor] 169 5.19746e-40
whdl_21081_a06f 2012 5' Crown of seedling 37bp            
whdl_10081_a06f 2012 5' Crown of seedling 382bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.23329e-67
whdl_13081_a06f 2012 5' Crown of seedling 548bp       PREDICTED:uncharacterizedproteinLOC100823290[Brachypodiumdistachyon] 306 3.17666e-81
whdl_17081_a06f 2012 5' Crown of seedling 203bp Contig2443       putativeproteinaseinhibitor-relatedprotein[Triticumaestivum] 153 1.6282e-35
whdl_18081_a06f 2012 5' Crown of seedling 512bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 2.17177e-80
whdl_19081_a06f 2012 5' Crown of seedling 599bp Contig10295       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.54435e-107
whdl_2081_a06f 2012 5' Crown of seedling 331bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 189 3.48363e-46
whdl_2082_a06f 2012 5' Crown of seedling 466bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 3.07609e-58
whdl_23082_a06f 2012 5' Crown of seedling 474bp       PREDICTED:uncharacterizedproteinLOC100832742[Brachypodiumdistachyon] 167 1.85827e-39
whdl_24082_a06f 2012 5' Crown of seedling 498bp Contig7027       chloroplastglutaminesynthetaseisoform2-1[Secalecereale] 352 3.10067e-95
whdl_25081_a06f 2012 5' Crown of seedling 458bp Contig10626       Hsp90-likeprotein[Dactylisglomerata] 306 2.54025e-81
whdl_26081_a06f 2012 5' Crown of seedling 290bp Contig10626       PREDICTED:endoplasminhomolog[Brachypodiumdistachyon] 190 1.58922e-46
whdl_4081_a06f 2012 5' Crown of seedling 392bp Contig3203       membraneprotein[Zeamays] 125 6.1178e-27
whdl_6081_a06f 2012 5' Crown of seedling 524bp Contig583       aminotransferase[Triticumaestivum] 348 6.29871e-94
whdl_8081_a06f 2012 5' Crown of seedling 529bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.04908e-95
whdl_10001_a07f 2012 5' Crown of seedling 426bp Contig35813       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.51961e-65
whdl_1001_a07f 2012 5' Crown of seedling 491bp Contig31855       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 4.85021e-80
whdl_2001_a07f 2012 5' Crown of seedling 400bp Contig12376       ATP-dependentRNAhelicase[Hordeumvulgaresubsp.vulgare] 226 2.61087e-57
whdl_2002_a07f 2012 5' Crown of seedling 371bp Contig12376       unknown[Aegilopstauschii] 38 0.000366798
whdl_22001_a07f 2012 5' Crown of seedling 115bp Contig30233       PREDICTED:uncharacterizedproteinLOC100822360[Brachypodiumdistachyon] 74 9.74797e-12
whdl_24002_a07f 2012 5' Crown of seedling 264bp Contig24243       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 2.07126e-38
whdl_25001_a07f 2012 5' Crown of seedling 338bp       similartoMitochondrialporin(voltage-dependentanionchannel)[Botryotiniafuckeliana] 150 2.32443e-34
whdl_26001_a07f 2012 5' Crown of seedling 423bp Contig5374       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.13747e-28
whdl_3001_a07f 2012 5' Crown of seedling 410bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.00765e-61
whdl_7001_a07f 2012 5' Crown of seedling 350bp Contig2714       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.52889e-49
whdl_9001_a07f 2012 5' Crown of seedling 414bp       PREDICTED:pollen-specificproteinSF3-like[Brachypodiumdistachyon] 177 1.3569e-42
whdl_21017_a08f 2012 5' Crown of seedling 502bp Contig340       PREDICTED:40SribosomalproteinS21-like[Brachypodiumdistachyon] 162 3.45217e-38
whdl_10017_a08f 2012 5' Crown of seedling 81bp            
whdl_11017_a08f 2012 5' Crown of seedling 332bp Contig564       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 7.24699e-52
whdl_12017_a08f 2012 5' Crown of seedling 466bp Contig331       Chaint,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 214 1.33741e-53
whdl_2017_a08f 2012 5' Crown of seedling 426bp Contig36318       PREDICTED:histoneH4-like[Glycinemax] 210 1.91868e-52
whdl_2018_a08f 2012 5' Crown of seedling 253bp       histoneH4[Zeamays] 83 3.47521e-14
whdl_22017_a08f 2012 5' Crown of seedling 371bp Contig36542       RecName:Full=HMG1/2-likeprotein 233 2.14232e-59
whdl_23018_a08f 2012 5' Crown of seedling 342bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 5.65741e-52
whdl_24018_a08f 2012 5' Crown of seedling 248bp Contig20547       ribosomalproteinL11[Triticumaestivum] 140 1.84054e-31
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