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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5289
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ728092 whvs1a03 2003 5' Liquid cultured tissue 152bp Wh_VSCB_all.Contig2565 MUGEST2003_all.Contig25010 MUGEST2003_all.Contig25010       alcohol dehydrogenase ADH1 [Triticum urartu] 137 3.74231e-07
CJ728093 whvs1a04 2003 5' Liquid cultured tissue 534bp whvs1a04 MUGEST2003_all.Contig24618 MUGEST2003_all.Contig24618       GF17495 [Drosophila ananassae] 90 0.135593
CJ728094 whvs1a05 2003 5' Liquid cultured tissue 601bp Wh_VSCB_all.Contig1994 MUGEST2003_all.Contig24323 MUGEST2003_all.Contig24323       hypothetical protein OsI_026589 [Oryza sativa (indica cultivar-group)] 447 7.61217e-43
CJ728095 whvs1a06 2003 5' Liquid cultured tissue 462bp Wh_VSCB_all.Contig2295 MUGEST2003_all.Contig19815 MUGEST2003_all.Contig19815       putative zinc finger protein30 [Zea mays] 388 2.46533e-36
CJ728096 whvs1a07 2003 5' Liquid cultured tissue 780bp Wh_VSCB_all.Contig1563 MUGEST2003_all.Contig21530 MUGEST2003_all.Contig21530       hypothetical protein OsI_019267 [Oryza sativa (indica cultivar-group)] 111 0.001206
CJ728097 whvs1a09 2003 5' Liquid cultured tissue 684bp Wh_VSCB_all.Contig2277 MUGEST2003_all.Contig25200 MUGEST2003_all.Contig25200       unknown [Zea mays] 599 2.4073e-60
CJ728098 whvs1a10 2003 5' Liquid cultured tissue 560bp Wh_VSCB_all.Contig1825 MUGEST2003_all.Contig10141 MUGEST2003_all.Contig10141       glutathione s-transferase gstf2 [Oryza sativa (indica cultivar-group)] 205 7.21978e-15
CJ728099 whvs1a11 2003 5' Liquid cultured tissue 582bp Wh_VSCB_all.Contig1745 MUGEST2003_all.Contig25063 MUGEST2003_all.Contig25063       unknown [Zea mays] 736 2.15897e-76
CJ728100 whvs1a14 2003 5' Liquid cultured tissue 583bp Wh_VSCB_all.Contig1901 MUGEST2003_all.Contig22487 MUGEST2003_all.Contig22487       Histone H2B.1 478 1.80962e-46
CJ728101 whvs1a15 2003 5' Liquid cultured tissue 784bp Wh_VSCB_all.Contig1931 MUGEST2003_all.Contig13909 MUGEST2003_all.Contig13909       unknown [Zea mays] 394 1.85792e-36
CJ728102 whvs1a16 2003 5' Liquid cultured tissue 763bp Wh_VSCB_all.Contig1931 MUGEST2003_all.Contig13909 MUGEST2003_all.Contig13909       unknown [Zea mays] 368 1.83252e-33
CJ728103 whvs1a17 2003 5' Liquid cultured tissue 747bp Wh_VSCB_all.Contig1755 MUGEST2003_all.Contig20853 MUGEST2003_all.Contig20853       expansin EXPB9 [Triticum aestivum] 1006 1.84747e-107
CJ728104 whvs1a18 2003 5' Liquid cultured tissue 497bp Wh_VSCB_all.Contig1519 MUGEST2003_all.Contig5112 MUGEST2003_all.Contig5112       hypothetical protein [Vitis vinifera] 74 7.88306
CJ728105 whvs1a19 2003 5' Liquid cultured tissue 633bp Wh_VSCB_all.Contig1525 MUGEST2003_all.Contig5099 MUGEST2003_all.Contig5099       unnamed protein product [Vitis vinifera] 166 3.26943e-10
CJ728106 whvs1a22 2003 5' Liquid cultured tissue 752bp Wh_VSCB_all.Contig2235 MUGEST2003_all.Contig23380 MUGEST2003_all.Contig23380       Os12g0569200 [Oryza sativa (japonica cultivar-group)] 465 1.01502e-44
CJ728107 whvs1a24 2003 5' Liquid cultured tissue 698bp Wh_VSCB_all.Contig1471 MUGEST2003_all.Contig13536 MUGEST2003_all.Contig13536       unnamed protein product [Tetraodon nigroviridis] 86 0.774653
CJ728108 whvs1b02 2003 5' Liquid cultured tissue 456bp Wh_VSCB_all.Contig2254 MUGEST2003_all.Contig22678 MUGEST2003_all.Contig22678       unknown [Zea mays] 314 1.10077e-27
CJ728109 whvs1b04 2003 5' Liquid cultured tissue 489bp Wh_VSCB_all.Contig1317 MUGEST2003_all.Contig12104 MUGEST2003_all.Contig12104       unknown [Zea mays] 603 3.41917e-61
CJ728110 whvs1b05 2003 5' Liquid cultured tissue 106bp whvs1b05       4-hydroxyphenylpyruvate dioxygenase [Triticum aestivum] 110 1.24073e-05
CJ728111 whvs1b06 2003 5' Liquid cultured tissue 645bp Wh_VSCB_all.Contig393 MUGEST2003_all.Contig22988 MUGEST2003_all.Contig22988       Os08g0139000 [Oryza sativa (japonica cultivar-group)] 497 1.42483e-48
CJ728112 whvs1b08 2003 5' Liquid cultured tissue 734bp Wh_VSCB_all.Contig300 MUGEST2003_all.Contig5091 MUGEST2003_all.Contig5091       hypothetical protein OsJ_006967 [Oryza sativa (japonica cultivar-group)] 1151 2.74005e-124
CJ728113 whvs1b10 2003 5' Liquid cultured tissue 675bp Wh_VSCB_all.Contig2553 MUGEST2003_all.Contig25367 MUGEST2003_all.Contig25367       ribosomal protein [Bromus inermis] 983 7.00062e-105
CJ728114 whvs1b11 2003 5' Liquid cultured tissue 610bp Wh_VSCB_all.Contig2414 MUGEST2003_all.Contig24971 MUGEST2003_all.Contig24971       Elongation factor 1-alpha (EF-1-alpha) 957 5.69545e-102
CJ728115 whvs1b12 2003 5' Liquid cultured tissue 405bp Wh_VSCB_all.Contig2414 MUGEST2003_all.Contig24971 MUGEST2003_all.Contig24971       Elongation factor 1-alpha (EF-1-alpha) 673 2.60853e-69
CJ728116 whvs1b13 2003 5' Liquid cultured tissue 779bp whvs1b13 MUGEST2003_all.Contig21156 MUGEST2003_all.Contig21156       hypothetical protein OsI_011781 [Oryza sativa (indica cultivar-group)] 1051 1.20814e-112
CJ728117 whvs1b14 2003 5' Liquid cultured tissue 725bp whvs1b14 MUGEST2003_all.Contig337 MUGEST2003_all.Contig337       unknown [Zea mays] 242 6.7709e-19
CJ728118 whvs1b15 2003 5' Liquid cultured tissue 571bp Wh_VSCB_all.Contig1831 MUGEST2003_all.Contig25424 MUGEST2003_all.Contig25424       Phosphomannomutase (TaPMM) 956 6.36188e-102
CJ728119 whvs1b16 2003 5' Liquid cultured tissue 279bp Wh_VSCB_all.Contig1831 MUGEST2003_all.Contig25424 MUGEST2003_all.Contig25424       Phosphomannomutase (TaPMM) 450