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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4436
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ709605 whv3n1a01 2003 5' Shoot grown under cold condition for 3days 288bp Wh_V483_all.Contig1707 MUGEST2003_all.Contig25427 MUGEST2003_all.Contig25427       ribulosebisphosphate carboxylase [Triticum aestivum] 369 4.68394e-34
CJ709606 whv3n1a02 2003 5' Shoot grown under cold condition for 3days 510bp Wh_V483_all.Contig1246 MUGEST2003_all.Contig25226 MUGEST2003_all.Contig25226       unknown [Zea mays] 574 8.8529e-58
CJ709607 whv3n1a04 2003 5' Shoot grown under cold condition for 3days 561bp Wh_V483_all.Contig1660 MUGEST2003_all.Contig25374 MUGEST2003_all.Contig25374       Carbonic anhydrase, chloroplast precursor (Carbonate dehydratase) 818 5.98565e-86
CJ709608 whv3n1a05 2003 5' Shoot grown under cold condition for 3days 413bp Wh_V483_all.Contig1477 MUGEST2003_all.Contig24928 MUGEST2003_all.Contig24928       metallothioneine type2 [Hordeum vulgare subsp. vulgare] 159 1.02987e-09
CJ709609 whv3n1a06 2003 5' Shoot grown under cold condition for 3days 393bp Wh_V483_all.Contig1620 MUGEST2003_all.Contig25048 MUGEST2003_all.Contig25048       Low temperature-induced protein lt101.1 (Blt101.1) (Blt101) 152 6.64449e-09
CJ709610 whv3n1a10 2003 5' Shoot grown under cold condition for 3days 111bp whv3n1a10       transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] 109 0.000661754
CJ709611 whv3n1a11 2003 5' Shoot grown under cold condition for 3days 379bp Wh_V483_all.Contig1683 MUGEST2003_all.Contig25343 MUGEST2003_all.Contig25343       methionine synthase 1 enzyme [Hordeum vulgare subsp. vulgare] 541 5.27522e-54
CJ709612 whv3n1a12 2003 5' Shoot grown under cold condition for 3days 643bp Wh_V483_all.Contig927 MUGEST2003_all.Contig5451 MUGEST2003_all.Contig5451       putative non-ribosomal peptide synthetase [Streptomyces pristinaespiralis ATCC 25486] 80 3.1808
CJ709613 whv3n1a15 2003 5' Shoot grown under cold condition for 3days 283bp Wh_V483_all.Contig1653 MUGEST2003_all.Contig24810 MUGEST2003_all.Contig24810       hblt14.2 protein [Hordeum vulgare subsp. vulgare] 232 3.49924e-18
CJ709614 whv3n1a16 2003 5' Shoot grown under cold condition for 3days 641bp Wh_V483_all.Contig1205 MUGEST2003_all.Contig24606 MUGEST2003_all.Contig24606       USP family protein [Triticum aestivum] 648 4.35685e-66
CJ709615 whv3n1a20 2003 5' Shoot grown under cold condition for 3days 607bp Wh_V483_all.Contig1613 MUGEST2003_all.Contig25227 MUGEST2003_all.Contig25227       Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (Rieske iron-sulfur protein) (RISP) (ISP) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) 821 3.30918e-86
CJ709616 whv3n1b02 2003 5' Shoot grown under cold condition for 3days 548bp Wh_V483_all.Contig920 MUGEST2003_all.Contig16561 MUGEST2003_all.Contig16561       putative alanine aminotransferase [Triticum aestivum] 359 9.56141e-33
CJ709617 whv3n1b03 2003 5' Shoot grown under cold condition for 3days 648bp Wh_V483_all.Contig1689 MUGEST2003_all.Contig25395 MUGEST2003_all.Contig25395       Carbonic anhydrase, chloroplast precursor (Carbonate dehydratase) 1008 8.12881e-108
CJ709618 whv3n1b05 2003 5' Shoot grown under cold condition for 3days 548bp Wh_V483_all.Contig1701 MUGEST2003_all.Contig25421 MUGEST2003_all.Contig25421       Unknown (protein for MGC:35458) [Homo sapiens] 860 7.69577e-91
CJ709619 whv3n1b06 2003 5' Shoot grown under cold condition for 3days 596bp whv3n1b06 MUGEST2003_all.Contig11340 MUGEST2003_all.Contig11340       Os11g0143500 [Oryza sativa (japonica cultivar-group)] 745 2.06158e-77
CJ709620 whv3n1b09 2003 5' Shoot grown under cold condition for 3days 480bp Wh_V483_all.Contig1469 MUGEST2003_all.Contig25254 MUGEST2003_all.Contig25254       cytosolic malate dehydrogenase [Triticum aestivum] 768 2.48678e-80
CJ709621 whv3n1b10 2003 5' Shoot grown under cold condition for 3days 540bp Wh_V483_all.Contig1249 MUGEST2003_all.Contig21642 MUGEST2003_all.Contig21642       hypothetical protein OsI_003214 [Oryza sativa (indica cultivar-group)] 521 1.5127e-51
CJ709622 whv3n1b11 2003 5' Shoot grown under cold condition for 3days 529bp Wh_V483_all.Contig1487 MUGEST2003_all.Contig24448 MUGEST2003_all.Contig24448       hypothetical protein OsJ_034246 [Oryza sativa (japonica cultivar-group)] 782 7.80234e-82
CJ709623 whv3n1b14 2003 5' Shoot grown under cold condition for 3days 603bp whv3n1b14       hypothetical protein [Plasmodium berghei strain ANKA] 80 2.73899
CJ709624 whv3n1b15 2003 5' Shoot grown under cold condition for 3days 404bp whv3n1b15 MUGEST2003_all.Contig17963 MUGEST2003_all.Contig17963       hypothetical protein OsI_11493 [Oryza sativa Indica Group] 87 0.245693
CJ709625 whv3n1b17 2003 5' Shoot grown under cold condition for 3days 322bp whv3n1b17 MUGEST2003_all.Contig24211 MUGEST2003_all.Contig24211            
CJ709626 whv3n1b19 2003 5' Shoot grown under cold condition for 3days 175bp Wh_V483_all.Contig1676 MUGEST2003_all.Contig25412 MUGEST2003_all.Contig25412       chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum] 160 6.36508e-23
CJ709627 whv3n1b22 2003 5' Shoot grown under cold condition for 3days 234bp Wh_V483_all.Contig1078 MUGEST2003_all.Contig11995 MUGEST2003_all.Contig11995       magnesium protoporphyrin O-methyltransferase [Rhodospirillum centenum SW] 73 9.78048
CJ709628 whv3n1b23 2003 5' Shoot grown under cold condition for 3days 633bp Wh_V483_all.Contig1672 MUGEST2003_all.Contig25407 MUGEST2003_all.Contig25407       PS II 10 kDa protein [Phyllostachys pubescens] 483 5.70455e-47
CJ709629 whv3n1b24 2003 5' Shoot grown under cold condition for 3days 317bp Wh_V483_all.Contig846 MUGEST2003_all.Contig23798 MUGEST2003_all.Contig23798       hypothetical protein OsI_012174 [Oryza sativa (indica cultivar-group)] 282 5.75522e-24
CJ709630 whv3n1c02 2003 5' Shoot grown under cold condition for 3days 282bp Wh_V483_all.Contig1251 MUGEST2003_all.Contig25236 MUGEST2003_all.Contig25236       unknown [Zea mays] 309 4.1386e-27
CJ709631 whv3n1c06 2003 5' Shoot grown under cold condition for 3days 325bp whv3n1c06 MUGEST2003_all.Contig21318 MUGEST2003_all.Contig21318       Myb-like DNA-binding domain containing protein [Trichomonas vaginalis G3] 76 4.38854
CJ709632 whv3n1c07 2003 5' Shoot grown under cold condition for 3days 340bp Wh_V483_all.Contig1700 MUGEST2003_all.Contig25408 MUGEST2003_all.Contig25408       ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Triticum aestivum] 443 1.19703e-42
CJ709633 whv3n1c08 2003 5' Shoot grown under cold condition for 3days 554bp Wh_V483_all.Contig1689 MUGEST2003_all.Contig25395 MUGEST2003_all.Contig25395       Carbonic anhydrase, chloroplast precursor (Carbonate dehydratase) 555 1.85465e-55
CJ709634 whv3n1c10 2003 5' Shoot grown under cold condition for 3days 625bp Wh_V483_all.Contig1429 MUGEST2003_all.Contig21316 MUGEST2003_all.Contig21316       hypothetical protein OsI_006488 [Oryza sativa (indica cultivar-group)] 173 4.91947e-11
CJ709635 whv3n1c11 2003 5' Shoot grown under cold condition for 3days 680bp whv3n1c11 MUGEST2003_all.Contig22803 MUGEST2003_all.Contig22803       hypothetical protein OsJ_007265 [Oryza sativa (japonica cultivar-group)] 253 3.14791e-20
CJ709636 whv3n1c13 2003 5' Shoot grown under cold condition for 3days 136bp whv3n1c13            
CJ709637 whv3n1c14 2003 5' Shoot grown under cold condition for 3days 663bp Wh_V483_all.Contig660 MUGEST2003_all.Contig5466 MUGEST2003_all.Contig5466       unknown [Zea mays] 89 0.311666
CJ709638 whv3n1c17 2003 5' Shoot grown under cold condition for 3days 267bp Wh_V483_all.Contig417 MUGEST2003_all.Contig24179 MUGEST2003_all.Contig24179       hypothetical protein OsJ_004455 [Oryza sativa (japonica cultivar-group)] 272 8.21992e-23
CJ709639 whv3n1c20 2003 5' Shoot grown under cold condition for 3days 101bp Wh_V483_all.Contig1707 MUGEST2003_all.Contig25427 MUGEST2003_all.Contig25427       Ribulose bisphosphate carboxylase small chain clone 512 (RuBisCO small subunit) 199 2.34503e-14
CJ709640 whv3n1c23 2003 5' Shoot grown under cold condition for 3days 382bp Wh_V483_all.Contig1581 MUGEST2003_all.Contig24786 MUGEST2003_all.Contig24786       chloroplast oxygen-evolving enhancer protein 1 [Leymus chinensis] 431 3.0024e-41
CJ709641 whv3n1d04