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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download  -------------------------- How to Order Resources MTA Sample

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 7283
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ208621 wh10a01 2002 5' Spike at meiosis 636bp Contig9084 Contig9084 P12768 GO:0003677 DNA binding RecName: Full=Mannan endo-1,4-beta-mannosidase 2; AltName: Full=Beta-mannanase 2; AltName: Full=Endo-beta-1,4-mannanase 2; AltName: Full=OsMAN2; Flags: Precursor 735 3.47121e-76
BJ208622 wh10a02 2002 5' Spike at meiosis 638bp Contig16215 Contig16215 P12768 GO:0006281 DNA repair small Ras-related GTP-binding protein [Triticum aestivum] 1032 1.27828e-110
BJ208623 wh10a03 2002 5' Spike at meiosis 571bp Contig15089 Contig15089 P12768 GO:0016829 lyase activity hypothetical protein OsI_011532 [Oryza sativa (indica cultivar-group)] 700 3.03063e-72
BJ208624 wh10a05 2002 5' Spike at meiosis 389bp Contig16167 Contig16167 P38548 GO:0005525 GTP binding hypothetical protein [Vitis vinifera] 633 1.1196e-64
BJ208625 wh10a06 2002 5' Spike at meiosis 642bp Contig15848 Contig15848 P38548 GO:0005634 nucleus unknown [Zea mays] 451 3.07445e-43
BJ208626 wh10a09 2002 5' Spike at meiosis 538bp Contig15481 Contig15481 P38548 GO:0006886 intracellular protein transport unknown [Zea mays] 123 2.06111e-05
BJ208627 wh10a12 2002 5' Spike at meiosis 650bp Contig1737 Contig1737 P38548 GO:0008565 protein transporter activity ribosomal protein L3-B2 [Triticum aestivum] 730 1.39949e-75
BJ208628 wh10a13 2002 5' Spike at meiosis 634bp Contig15218 Contig15218 P38548 GO:0015031 protein transport Os05g0516600 [Oryza sativa (japonica cultivar-group)] 823 2.16919e-86
BJ208629 wh10a16 2002 5' Spike at meiosis 665bp Contig10877 Contig10877 Q9M3V8 GO:0003735 structural constituent of ribosome putative CGI-34 protein [Oryza sativa Japonica Group] 929 1.22493e-98
BJ208630 wh10a17 2002 5' Spike at meiosis 451bp P59169 GO:0000786 nucleosome Os02g0832500 [Oryza sativa (japonica cultivar-group)] 681 3.08567e-70
BJ208631 wh10a19 2002 5' Spike at meiosis 589bp Contig13959 Contig13959 P59169 GO:0003677 DNA binding H0820C10.3 [Oryza sativa (indica cultivar-group)] 815 1.52984e-85
BJ208632 wh10a21 2002 5' Spike at meiosis 591bp P59169 GO:0005634 nucleus conserved hypothetical protein [Cyanothece sp. PCC 7425] 81 1.98066
BJ208633 wh10a22 2002 5' Spike at meiosis 509bp Contig15697 Contig15697 P59169 GO:0005694 chromosome unknown [Zea mays] 422 3.73674e-40
BJ208634 wh10b01 2002 5' Spike at meiosis 283bp Contig13282 Contig13282 P27807 GO:0000786 nucleosome unknown [Zea mays] 419 7.24578e-40
BJ208635 wh10b02 2002 5' Spike at meiosis 574bp Contig16171 Contig16171 P27807 GO:0003677 DNA binding Elongation factor 1-alpha (EF-1-alpha) 893 1.30525e-94
BJ208636 wh10b04 2002 5' Spike at meiosis 546bp Contig16061 Contig16061 P27807 GO:0005634 nucleus Protein H2A.7 (wcH2A-4) (wcH2A-10) 444 1.30732e-42
BJ208637 wh10b08 2002 5' Spike at meiosis 662bp Contig8650 Contig8650 P27807 GO:0005694 chromosome Os01g0708000 [Oryza sativa (japonica cultivar-group)] 413 8.38961e-39
BJ208638 wh10b09 2002 5' Spike at meiosis 528bp Contig13433 Contig13433 P46585 GO:0000287 magnesium ion binding unknown [Zea mays] 423 3.3163e-40
BJ208639 wh10b12 2002 5' Spike at meiosis 639bp Contig13572 Contig13572 P46585 GO:0009165 nucleotide biosynthesis hypothetical protein OsJ_018508 [Oryza sativa (japonica cultivar-group)] 868 1.32896e-91
BJ208640 wh10b13 2002 5' Spike at meiosis 353bp Contig1752 Contig1752 P46585 GO:0016301 kinase activity hypothetical protein OsJ_014597 [Oryza sativa (japonica cultivar-group)] 204 6.31176e-15
BJ208641 wh10b15 2002 5' Spike at meiosis 586bp P46585 GO:0016740 transferase activity unknown [Zea mays] 511 2.69786e-50
BJ208642 wh10b17 2002 5' Spike at meiosis 599bp Contig16261 Contig16261 P35684 GO:0003735 structural constituent of ribosome Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 866 1.94809e-91
BJ208643 wh10b19 2002 5' Spike at meiosis 133bp Contig16150 Contig16150 Q40787 GO:0005525 GTP binding Os11g0211800 [Oryza sativa (japonica cultivar-group)] 173 2.4565e-11
BJ208644 wh10b20 2002 5' Spike at meiosis 369bp Contig14950 Contig14950 Q40787 GO:0006886 intracellular protein transport Histone H2B.5 (wcH2B-6) 448 3.13801e-43
BJ208645 wh10b21 2002 5' Spike at meiosis 594bp Contig10777 Contig10777 Q40787 GO:0008565 protein transporter activity Os03g0402000 [Oryza sativa (japonica cultivar-group)] 940 5.04263e-100
BJ208646 wh10c03 2002 5' Spike at meiosis 605bp Contig15463 Contig15463 Q40787 GO:0015031 protein transport ribosomal protein L15 [Homo sapiens] 786 3.78619e-82
BJ208647 wh10c04 2002 5' Spike at meiosis 611bp Contig8868 Contig8868 Q9XGW1 GO:0007275 development Os09g0566400 [Oryza sativa (japonica cultivar-group)] 128 7.75178e-06
BJ208648 wh10c05 2002 5' Spike at meiosis 434bp Contig15453 Contig15453 O75326 GO:0007275 development unknown [Zea mays] 314 1.09877e-27
BJ208649 wh10c06 2002 5' Spike at meiosis 639bp O75326 GO:0007399 neurogenesis Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 921 9.50194e-98
BJ208650 wh10c08 2002 5' Spike at meiosis 448bp Contig1753 Contig1753 O23290 GO:0003735 structural constituent of ribosome Ras-related protein Rab-6A, putative, expressed [Oryza sativa (japonica cultivar-group)] 529 1.30244e-52
BJ208651 wh10c09 2002 5' Spike at meiosis 607bp Contig11371 Contig11371 P49210 GO:0003735 structural constituent of ribosome hypothetical protein OsJ_010169 [Oryza sativa (japonica cultivar-group)] 783 8.5503e-82
BJ208652 wh10c11 2002 5' Spike at meiosis 639bp Contig9943 Contig9943 Q03033 GO:0003746 translation elongation factor activity beta-expansin TaEXPB2 [Triticum aestivum] 819 6.38834e-86
BJ208653 wh10c14 2002 5' Spike at meiosis 141bp Contig16041 Contig16041 Q03033 GO:0005525 GTP binding      
BJ208654 wh10c15 2002 5' Spike at meiosis 584bp Contig12254 Contig12254 Q03033 GO:0006412 protein biosynthesis Os09g0281300 [Oryza sativa (japonica cultivar-group)] 790 1.19983e-82
BJ208655 wh10c17 2002 5' Spike at meiosis 277bp Contig15646 Contig15646 P35063 GO:0000786 nucleosome glutathione transferase F6 [Triticum aestivum] 467 1.98263e-45
BJ208656 wh10c19 2002 5' Spike at meiosis 533bp Contig15897 Contig15897 P35063 GO:0003677 DNA binding unknown [Zea mays] 410 1.06198e-38
BJ208657 wh10c20 2002 5' Spike at meiosis 542bp Contig15918 Contig15918 P35063 GO:0005634 nucleus unknown [Zea mays] 412 6.59214e-39
BJ208658 wh10c24 2002 5' Spike at meiosis 183bp Contig13181 Contig13181 P35063 GO:0005694 chromosome      
BJ208659 wh10d01 2002 5' Spike at meiosis 557bp Contig16238 Contig16238 Q9PU53 GO:0000781 chromosome, telomeric region unnamed protein product [Kluyveromyces lactis] 231 7.00865e-18
BJ208660 wh10d04 2002 5' Spike at meiosis 452bp Contig14587 Contig14587 Q9PU53 GO:0003677 DNA binding BAX inhibitor 1 [Hordeum vulgare subsp. vulgare] 397 6.25735e-54
BJ208661 wh10d05 2002 5' Spike at meiosis 599bp Contig15969 Contig15969 Q9PU53 GO:0005634 nucleus unknown [Zea mays] 871 5.12655e-92
BJ208662 wh10d08 2002 5' Spike at meiosis 645bp Contig15887 Contig15887 Q9PU53 GO:0005694 chromosome Protein H2A.7 (wcH2A-4) (wcH2A-10) 444 1.9928e-42
BJ208663 wh10d09 2002 5' Spike at meiosis 554bp Contig1765 Contig1765 Q9PU53 GO:0007004 telomerase-dependent telomere maintenance putative phage-related protein, similar to zonula occudens toxin [Stenotrophomonas maltophilia K279a] 77 4.96056
BJ208664 wh10d12 2002 5' Spike at meiosis 665bp Contig16249 Contig16249 Q9PU53 GO:0007049 cell cycle eukaryotic translation initiation factor 5A1 [Triticum aestivum] 845 6.73704e-89
BJ208665 wh10d16 2002 5' Spike at meiosis 525bp Contig14415 Contig14415 P08578 GO:0003723 RNA binding DNA-binding protein S1FA [Triticum aestivum] 479 1.02261e-46
BJ208666 wh10d17 2002 5' Spike at meiosis 486bp P08578 GO:0005634 nucleus hypothetical protein OsI_016256 [Oryza sativa (indica cultivar-group)] 427 8.56962e-41
BJ208667 wh10d18 2002 5' Spike at meiosis 707bp P08578 GO:0006371 mRNA splicing hypothetical protein OsJ_000400 [Oryza sativa (japonica cultivar-group)] 137 9.72542e-07
BJ208668 wh10d20 2002 5' Spike at meiosis 196bp Contig10011 Contig10011 P08578 GO:0006397 mRNA processing Os01g0265700 [Oryza sativa (japonica cultivar-group)] 219 1.97545e-17
BJ208669 wh10d22 2002 5' Spike at meiosis 452bp Contig15642 Contig15642 P08578 GO:0030529 ribonucleoprotein complex Os03g0353400 [Oryza sativa (japonica cultivar-group)] 433 1.75683e-41
BJ208670 wh10e01 2002 5' Spike at meiosis 682bp Contig1775 Contig1775 P35402 GO:0004872 receptor activity hypothetical protein Bm1_17870 [Brugia malayi] 231 1.13127e-17
BJ208671 wh10e02 2002 5' Spike at meiosis 586bp Contig13924 Contig13924 P35402 GO:0005783 endoplasmic reticulum Os01g0754100 [Oryza sativa (japonica cultivar-group)] 457 5.00162e-44
BJ208672 wh10e03 2002 5' Spike at meiosis 375bp P35402 GO:0006886 intracellular protein transport      
BJ208673 wh10e06 2002 5' Spike at meiosis 726bp P35402 GO:0008565 protein transporter activity Os09g0528800 [Oryza sativa (japonica cultivar-group)] 436 2.16302e-41
BJ208674 wh10e08 2002 5' Spike at meiosis 496bp Contig14868 Contig14868 P35402 GO:0015031 protein transport Protein H2A.5 (wcH2A-2) 463 6.15981e-45
BJ208675 wh10e09 2002 5' Spike at meiosis 579bp Contig11105 Contig11105 P35402 GO:0016021 integral to membrane unknown [Zea mays] 465 5.73446e-45
BJ208676 wh10e10 2002 5' Spike at meiosis 493bp Contig10641 Contig10641 Q05185 GO:0016829 lyase activity putative senescence-associated protein [Pyrus communis] 319 1.0016e-28
BJ208677 wh10e12 2002 5' Spike at meiosis 181bp Contig10641 Contig10641 Q05185 GO:0016831 carboxy-lyase activity putative senescence-associated protein [Lilium longiflorum] 243 1.85972e-19
BJ208678 wh10e14 2002 5' Spike at meiosis 363bp Contig16291 Contig16291 Q05185 GO:0046821 extrachromosomal DNA unknown [Zea mays] 312 1.86992e-27
BJ208679 wh10e16 2002 5' Spike at meiosis 570bp Contig16260 Contig16260 P34341 GO:0005871 kinesin complex HMG1/2-like protein 359 1.07076e-32
BJ208680 wh10e18 2002 5' Spike at meiosis 524bp Contig16114 Contig16114 P26517 GO:0006096 glycolysis hypothetical protein [Aspergillus oryzae RIB40] 89 0.17092
BJ208681 wh10e19 2002 5' Spike at meiosis 655bp Contig16116 Contig16116 P26517 GO:0016491 oxidoreductase activity Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) 945 1.66057e-100
BJ208682 wh10e21 2002 5' Spike at meiosis 193bp P27807 GO:0000786 nucleosome      
BJ208683 wh10e22 2002 5' Spike at meiosis 588bp Contig15044 Contig15044 P27807 GO:0003677 DNA binding hypothetical protein OsJ_021291 [Oryza sativa (japonica cultivar-group)] 491 5.70933e-48
BJ208684 wh10e23 2002 5' Spike at meiosis 116bp P27807 GO:0005634 nucleus unknown [Zea mays] 175 1.46205e-11
BJ208685 wh10f03 2002 5' Spike at meiosis 615bp Contig14456 Contig14456 P27807 GO:0005694 chromosome unknown [Zea mays] 757 9.08731e-79
BJ208686 wh10f04 2002 5' Spike at meiosis 537bp Contig16253 Contig16253 O55013 GO:0005783 endoplasmic reticulum hypothetical protein ZeamMp158 [Zea mays subsp. mays] 209 5.07021e-16
BJ208687 wh10f05 2002 5' Spike at meiosis 602bp Contig7875 Contig7875 O55013 GO:0005794 Golgi apparatus hypothetical protein OsJ_002992 [Oryza sativa (japonica cultivar-group)] 887 7.25426e-94
BJ208688 wh10f06 2002 5' Spike at meiosis 320bp O55013 GO:0006810 transport cadmium tolerance factor [Triticum aestivum] 278 1.66837e-23
BJ208689 wh10f07 2002 5' Spike at meiosis 591bp Contig12064 Contig12064 O23515 GO:0003735 structural constituent of ribosome hypothetical protein OsI_003633 [Oryza sativa (indica cultivar-group)] 579 3.55149e-58
BJ208690 wh10f12 2002 5' Spike at meiosis 484bp Contig14448 Contig14448 P49689 GO:0003735 structural constituent of ribosome Cu/Zn superoxide dismutase [Triticum aestivum] 574 7.71502e-58
BJ208691 wh10f15 2002 5' Spike at meiosis 628bp Contig16093 Contig16093 P26517 GO:0006096 glycolysis ADP-ribosylation factor [Oryza sativa Japonica Group] 841 1.73123e-88
BJ208692 wh10f17 2002 5' Spike at meiosis 453bp Contig14157 Contig14157 P26517 GO:0016491 oxidoreductase activity unknown [Zea mays] 410 8.12569e-39
BJ208693 wh10f18 2002 5' Spike at meiosis 481bp Q9NRW1 GO:0005525 GTP binding unknown [Zea mays] 735 1.66804e-76
BJ208694 wh10f19 2002 5' Spike at meiosis 520bp Contig1795 Contig1795 Q9NRW1 GO:0005794 Golgi apparatus      
BJ208695 wh10f20 2002 5' Spike at meiosis 478bp Contig14919 Contig14919 Q9NRW1 GO:0006886 intracellular protein transport unknown [Zea mays] 422 3.28572e-40
BJ208696 wh10f21 2002 5' Spike at meiosis 207bp Contig15184 Contig15184 Q9NRW1 GO:0008565 protein transporter activity OSJNBa0068L06.9 [Oryza sativa (japonica cultivar-group)] 315 8.3891e-28
BJ208697 wh10g02 2002 5' Spike at meiosis 175bp Contig12550 Contig12550 Q9NRW1 GO:0015031 protein transport yersiniabactin polyketide/non-ribosomal peptide synthetase [Pseudomonas syringae pv. tomato str. DC3000] 75 5.64343
BJ208698 wh10g03 2002 5' Spike at meiosis 417bp Contig11520 Contig11520 P58738 GO:0005618 cell wall metallo-beta-lactamase family protein [Bordetella pertussis Tohama I] 78 2.53212
BJ208699 wh10g06 2002 5' Spike at meiosis 129bp P58738 GO:0016068 immediate hypersensitivity response hypothetical protein CHGG_10162 [Chaetomium globosum CBS 148.51] 76 4.35942
BJ208700 wh10g07 2002 5' Spike at meiosis 491bp Contig14695 Contig14695 Q08855 GO:0005746 mitochondrial electron transport chain unknown [Zea mays] 567 5.10927e-57
BJ208701 wh10g09 2002 5' Spike at meiosis 630bp Contig16291 Contig16291 Q08855 GO:0016021 integral to membrane ribosomal protein S7 [Triticum aestivum] 971 1.45879e-103
BJ208702 wh10g10 2002 5' Spike at meiosis 476bp Contig15826 Contig15826 Q08855 GO:0016491 oxidoreductase activity Chain 6, Structure Of Signal Recognition Particle Receptor (Sr) In Complex With Signal Recognition Particle (Srp) And Ribosome Nascent Chain Complex 544 2.35425e-54
BJ208703 wh10g13 2002 5' Spike at meiosis 564bp Contig15799 Contig15799 P12653 GO:0016740 transferase activity unknown [Zea mays] 280 1.47596e-23
BJ208704 wh10g14 2002 5' Spike at meiosis 566bp Contig15419 Contig15419 P59258 GO:0000786 nucleosome Unknown (protein for IMAGE:5194336) [Homo sapiens] 854 4.14144e-90
BJ208705 wh10g16 2002 5' Spike at meiosis 510bp P59258 GO:0003677 DNA binding unknown [Zea mays] 78 2.96028
BJ208706 wh10g17 2002 5' Spike at meiosis 442bp Contig14743 Contig14743 P59258 GO:0005634 nucleus metallothioneine type2 [Hordeum vulgare subsp. vulgare] 159 1.02015e-09
BJ208707 wh10g18 2002 5' Spike at meiosis 179bp Contig13436 Contig13436 P59258 GO:0005694 chromosome hypothetical protein Bm1_17870 [Brugia malayi] 207 2.77898e-15
BJ208708 wh10g22 2002 5' Spike at meiosis 516bp Contig1796 Contig1796 P59258 GO:0000786 nucleosome PREDICTED: hypothetical protein [Macaca mulatta] 95 0.0323307
BJ208709 wh10g23 2002 5' Spike at meiosis 666bp Contig16166 Contig16166 P59258 GO:0003677 DNA binding Os05g0565000 [Oryza sativa (japonica cultivar-group)] 903 1.26761e-95
BJ208710 wh10g24 2002 5' Spike at meiosis 297bp Contig14215 Contig14215 P59258 GO:0005634 nucleus unknown [Zea mays] 380 2.46593e-35
BJ208711 wh10h02 2002 5' Spike at meiosis 234bp Contig16225 Contig16225 P59258 GO:0005694 chromosome unknown [Zea mays] 403 5.28702e-38
BJ208712 wh10h04 2002 5' Spike at meiosis 190bp Contig12148 Contig12148 Q99280 GO:0000287 magnesium ion binding unknown [Zea mays] 128 4.14452e-06
BJ208713 wh10h05 2002 5' Spike at meiosis 237bp Q99280 GO:0004872 receptor activity      
BJ208714 wh10h06 2002 5' Spike at meiosis 551bp Contig7803 Contig7803 Q99280 GO:0006171 cAMP biosynthesis hypothetical protein OsI_013907 [Oryza sativa (indica cultivar-group)] 723 6.02555e-75
BJ208715 wh10h07 2002 5' Spike at meiosis 211bp Q99280 GO:0016021 integral to membrane      
BJ208716 wh10h08 2002 5' Spike at meiosis 605bp Contig7803 Contig7803 Q99280 GO:0016829 lyase activity hypothetical protein OsI_013907 [Oryza sativa (indica cultivar-group)] 795 3.42447e-83
BJ208717 wh10h10 2002 5' Spike at meiosis 616bp Contig11797 Contig11797 P42224 GO:0003677 DNA binding Os06g0193000 [Oryza sativa (japonica cultivar-group)] 886 1.01323e-93
BJ208718 wh10h11 2002 5' Spike at meiosis 676bp Contig15991 Contig15991 P42224 GO:0005634 nucleus 60S ribosomal protein L17-1 852 1.07364e-89
BJ208719 wh10h12 2002 5' Spike at meiosis 209bp Contig15198 Contig15198 P42224 GO:0006355 regulation of transcription, DNA-dependent Outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) 335 4.02331e-30
BJ208720 wh10h14 2002 5' Spike at meiosis 620bp Contig15676 Contig15676 Q9MBD8 GO:0006915 apoptosis Acyl carrier protein 3, chloroplast precursor (Acyl carrier protein III) (ACP III) 510 4.08323e-50
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