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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download  -------------------------- How to Order Resources MTA Sample

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 10084
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whrd_10015_a01f 2012 5' Root of dessiccated seed 616bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 289 5.57251e-76
whrd_1015_a01f 2012 5' Root of dessiccated seed 579bp Contig8043       RecName:Full=Phosphoglyceratekinase,cytosolic 339 2.33133e-91
whrd_11015_a01f 2012 5' Root of dessiccated seed 411bp       hypotheticalproteinTTHERM_00565640[Tetrahymenathermophila] 44 0.0180778
whrd_14015_a01f 2012 5' Root of dessiccated seed 565bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 391 4.93016e-107
whrd_15015_a01f 2012 5' Root of dessiccated seed 158bp Contig29941            
whrd_16015_a01f 2012 5' Root of dessiccated seed 567bp Contig6987       dehydrin[Triticumdurum] 253 2.07975e-75
whrd_17015_a01f 2012 5' Root of dessiccated seed 201bp       beta-glucosidase[Hordeumvulgaresubsp.vulgare] 135 6.01248e-30
whrd_19015_a01f 2012 5' Root of dessiccated seed 583bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 1.23793e-87
whrd_20015_a01f 2012 5' Root of dessiccated seed 298bp       pathogenesis-relatedprotein[Triticumaestivum] 145 7.60202e-33
whrd_2015_a01f 2012 5' Root of dessiccated seed 591bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.87547e-86
whrd_3015_a01f 2012 5' Root of dessiccated seed 567bp Contig13951       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 353 1.94323e-95
whrd_4015_a01f 2012 5' Root of dessiccated seed 549bp Contig30497       wali3[Triticumaestivum] 183 1.85704e-44
whrd_5015_a01f 2012 5' Root of dessiccated seed 641bp Contig975       predictedprotein[Hordeumvulgaresubsp.vulgare] 440 1.65962e-121
whrd_6015_a01f 2012 5' Root of dessiccated seed 557bp       PREDICTED:riboflavinbiosynthesisproteinribBA,chloroplastic-like[Brachypodiumdistachyon] 354 8.25546e-96
whrd_7015_a01f 2012 5' Root of dessiccated seed 666bp       PREDICTED:probableLRRreceptor-likeserine/threonine-proteinkinaseAt1g06840-like[Brachypodiumdistachyon] 402 5.5865e-110
whrd_10015_a01r 2012 3' Root of dessiccated seed 617bp Contig6769       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.13359e-92
whrd_1015_a01r 2012 3' Root of dessiccated seed 633bp Contig8043       predictedprotein[Hordeumvulgaresubsp.vulgare] 310 2.49067e-82
whrd_11015_a01r 2012 3' Root of dessiccated seed 379bp       hypotheticalproteinSrot_1129[SegniliparusrotundusDSM44985] 37 1.30536
whrd_14015_a01r 2012 3' Root of dessiccated seed 643bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 2.2587e-94
whrd_15015_a01r 2012 3' Root of dessiccated seed 131bp            
whrd_16015_a01r 2012 3' Root of dessiccated seed 635bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 285 6.6572e-75
whrd_17015_a01r 2012 3' Root of dessiccated seed 72bp       beta-glucosidase[Hordeumvulgaresubsp.vulgare] 58 6.60707e-07
whrd_18015_a01r 2012 3' Root of dessiccated seed 370bp Contig19187       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 1.65519e-40
whrd_19015_a01r 2012 3' Root of dessiccated seed 595bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 6.0472e-77
whrd_20015_a01r 2012 3' Root of dessiccated seed 433bp       pathogenesis-relatedprotein[Triticumaestivum] 146 1.97791e-33
whrd_2015_a01r 2012 3' Root of dessiccated seed 109bp       hypotheticalproteinSORBIDRAFT_02g003090[Sorghumbicolor] 73 2.17817e-11
whrd_3015_a01r 2012 3' Root of dessiccated seed 624bp Contig13951       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 299 4.35869e-79
whrd_4015_a01r 2012 3' Root of dessiccated seed 532bp Contig30497       wali3[Triticumaestivum] 183 1.64634e-44
whrd_5015_a01r 2012 3' Root of dessiccated seed 598bp Contig975       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 2.1743e-90
whrd_6015_a01r 2012 3' Root of dessiccated seed 628bp       PREDICTED:riboflavinbiosynthesisproteinribBA,chloroplastic-like[Brachypodiumdistachyon] 261 1.31541e-67
whrd_7015_a01r 2012 3' Root of dessiccated seed 555bp Contig27580       PREDICTED:probableLRRreceptor-likeserine/threonine-proteinkinaseAt1g06840-like[Brachypodiumdistachyon] 210 2.4672e-52
whrd_10015_a02f 2012 5' Root of dessiccated seed 454bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 233 1.60925e-59
whrd_1015_a02f 2012 5' Root of dessiccated seed 59bp            
whrd_12015_a02f 2012 5' Root of dessiccated seed 419bp Contig32671       coronatineinsensitive1-likeprotein[Triticumaestivum] 107 1.77373e-21
whrd_13015_a02f 2012 5' Root of dessiccated seed 280bp Contig1060       ES1A[Hordeumvulgare] 42 0.0400863
whrd_15015_a02f 2012 5' Root of dessiccated seed 574bp Contig30558       phosphoinositide-specificphospholipaseC2[Triticumaestivum] 406 1.99381e-111
whrd_16015_a02f 2012 5' Root of dessiccated seed 499bp Contig4743       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.58401e-33
whrd_17015_a02f 2012 5' Root of dessiccated seed 590bp       LEA2protein[Triticumaestivum] 332 5.1907e-89
whrd_19015_a02f 2012 5' Root of dessiccated seed 655bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 3.36939e-80
whrd_20015_a02f 2012 5' Root of dessiccated seed 599bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 3.80203e-103
whrd_4015_a02f 2012 5' Root of dessiccated seed 659bp Contig14586       bluecopperprotein[Triticumaestivum] 331 1.52713e-88
whrd_6015_a02f 2012 5' Root of dessiccated seed 586bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 4.83424e-108
whrd_7015_a02f 2012 5' Root of dessiccated seed 674bp Contig11868       PREDICTED:ferredoxin-dependentglutamatesynthase,chloroplastic-like[Brachypodiumdistachyon] 441 8.36436e-122
whrd_8015_a02f 2012 5' Root of dessiccated seed 632bp Contig29847       germin-likeprotein[Triticumaestivum] 403 2.82337e-110
whrd_9015_a02f 2012 5' Root of dessiccated seed 655bp       Shaggy-likekinase[Triticumaestivum] 341 1.44058e-91
whrd_10015_a02r 2012 3' Root of dessiccated seed 550bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.36866e-62
whrd_11015_a02r 2012 3' Root of dessiccated seed 275bp            
whrd_12015_a02r 2012 3' Root of dessiccated seed 393bp Contig32671       coronatineinsensitive1-likeprotein[Triticumaestivum] 122 5.17903e-26
whrd_13015_a02r 2012 3' Root of dessiccated seed 252bp Contig1060       ES1A[Hordeumvulgare] 44 0.0178896
whrd_15015_a02r 2012 3' Root of dessiccated seed 696bp       phosphoinositide-specificphospholipaseC2[Triticumaestivum] 372 6.79851e-101
whrd_16015_a02r 2012 3' Root of dessiccated seed 585bp Contig4743       predictedprotein[Hordeumvulgaresubsp.vulgare] 192 4.837e-47
whrd_17015_a02r 2012 3' Root of dessiccated seed 589bp       LEA2protein[Triticumaestivum] 309 1.91151e-98
whrd_19015_a02r 2012 3' Root of dessiccated seed 535bp Contig13390       predictedprotein[Hordeumvulgaresubsp.vulgare] 137 1.84568e-30
whrd_20015_a02r 2012 3' Root of dessiccated seed 628bp       Os04g0527400[OryzasativaJaponicaGroup] 271 9.86421e-71
whrd_4015_a02r 2012 3' Root of dessiccated seed 643bp Contig14586       bluecopperprotein[Triticumaestivum] 315 8.1554e-84
whrd_6015_a02r 2012 3' Root of dessiccated seed 647bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 1.31851e-81
whrd_7015_a02r 2012 3' Root of dessiccated seed 590bp Contig11830       predictedprotein[Hordeumvulgaresubsp.vulgare] 137 1.87639e-30
whrd_8015_a02r 2012 3' Root of dessiccated seed 582bp Contig24365       germin-likeprotein4[Triticummonococcum] 325 4.70411e-87
whrd_9015_a02r 2012 3' Root of dessiccated seed 604bp Contig23696       PREDICTED:abhydrolasedomain-containingprotein4-like[Brachypodiumdistachyon] 283 2.20744e-74
whrd_1016_a03f 2012 5' Root of dessiccated seed 654bp Contig11550       hypotheticalprotein[Aegilopstauschii] 254 1.35776e-65
whrd_11016_a03f 2012 5' Root of dessiccated seed 528bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 321 8.43722e-86
whrd_13016_a03f 2012 5' Root of dessiccated seed 576bp Contig23388       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 5.81458e-103
whrd_14016_a03f 2012 5' Root of dessiccated seed 651bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 5.17145e-57
whrd_16016_a03f 2012 5' Root of dessiccated seed 598bp Contig28638       predictedprotein[Hordeumvulgaresubsp.vulgare] 433 2.21865e-119
whrd_17016_a03f 2012 5' Root of dessiccated seed 677bp Contig31936       bluecopper-bindingproteinhomolog[Triticumaestivum] 335 6.53751e-90
whrd_19016_a03f 2012 5' Root of dessiccated seed 645bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 392 5.31597e-107
whrd_20016_a03f 2012 5' Root of dessiccated seed 628bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 415 7.21435e-114
whrd_2016_a03f 2012 5' Root of dessiccated seed 626bp Contig10561       smallGTP-bindingprotein[Triticumaestivum] 388 7.13469e-106
whrd_3016_a03f 2012 5' Root of dessiccated seed 637bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 4.21489e-85
whrd_5016_a03f 2012 5' Root of dessiccated seed 435bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.01818e-21
whrd_6016_a03f 2012 5' Root of dessiccated seed 563bp Contig5133       glutathione-S-transferase28e45[Triticumaestivum] 339 2.18363e-91
whrd_7016_a03f 2012 5' Root of dessiccated seed 624bp Contig4572       PREDICTED:26SproteaseregulatorysubunitS10BhomologB-like[Brachypodiumdistachyon] 287 2.2083e-75
whrd_8016_a03f 2012 5' Root of dessiccated seed 103bp Contig15223       excisionrepaircross-complementingrodentrepairdeficiency,complementationgroup6-like[Bostaurus] 39 0.575116
whrd_9016_a03f 2012 5' Root of dessiccated seed 495bp       PREDICTED:uncharacterizedproteinLOC100829450[Brachypodiumdistachyon] 99 2.77361e-19
whrd_1016_a03r 2012 3' Root of dessiccated seed 618bp Contig11550       hypotheticalprotein[Aegilopstauschii] 266 3.00397e-69
whrd_11016_a03r 2012 3' Root of dessiccated seed 582bp Contig7395       dehydrin[Triticumdurum] 232 4.89276e-69
whrd_13016_a03r 2012 3' Root of dessiccated seed 615bp Contig23388       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 4.70649e-83
whrd_14016_a03r 2012 3' Root of dessiccated seed 567bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 3.56571e-57
whrd_16016_a03r 2012 3' Root of dessiccated seed 606bp Contig12805       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 7.13588e-44
whrd_17016_a03r 2012 3' Root of dessiccated seed 565bp Contig31936       bluecopper-bindingproteinhomolog[Triticumaestivum] 281 7.05717e-74
whrd_19016_a03r 2012 3' Root of dessiccated seed 578bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 277 1.42095e-72
whrd_20016_a03r 2012 3' Root of dessiccated seed 669bp Contig19070       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 307 1.87271e-81
whrd_2016_a03r 2012 3' Root of dessiccated seed 650bp Contig10561       smallGTP-bindingprotein[Triticumaestivum] 325 6.18691e-87
whrd_3016_a03r 2012 3' Root of dessiccated seed 654bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 273 2.82454e-71
whrd_5016_a03r 2012 3' Root of dessiccated seed 404bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 128 9.59793e-28
whrd_6016_a03r 2012 3' Root of dessiccated seed 616bp Contig9667       glutathioneS-transferase1[Triticummonococcum] 317 1.93811e-84
whrd_7016_a03r 2012 3' Root of dessiccated seed 626bp Contig4572       PREDICTED:26SproteaseregulatorysubunitS10BhomologB-like[Brachypodiumdistachyon] 308 7.1845e-82
whrd_8016_a03r 2012 3' Root of dessiccated seed 157bp            
whrd_9016_a03r 2012 3' Root of dessiccated seed 463bp       PREDICTED:uncharacterizedproteinLOC100829450[Brachypodiumdistachyon] 101 9.46096e-20
whrd_1016_a04f 2012 5' Root of dessiccated seed 651bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 8.81522e-17
whrd_11016_a04f 2012 5' Root of dessiccated seed 432bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 284 1.0411e-74
whrd_12016_a04f 2012 5' Root of dessiccated seed 309bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 3.25725e-28
whrd_13016_a04f 2012 5' Root of dessiccated seed 204bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.9278e-28
whrd_14016_a04f 2012 5' Root of dessiccated seed 263bp Contig29147       P-typeATPase[Hordeumvulgare] 116 2.90365e-24
whrd_15016_a04f 2012 5' Root of dessiccated seed 588bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 5.27402e-94
whrd_16016_a04f 2012 5' Root of dessiccated seed 562bp Contig34655       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 2.74952e-102
whrd_18016_a04f 2012 5' Root of dessiccated seed 629bp       PREDICTED:uncharacterizedproteinLOC100841807[Brachypodiumdistachyon] 337 1.91177e-90
whrd_19016_a04f 2012 5' Root of dessiccated seed 526bp Contig8522       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 1.54119e-79
whrd_20016_a04f 2012 5' Root of dessiccated seed 592bp       PREDICTED:uncharacterizedproteinLOC100834200[Brachypodiumdistachyon] 238 1.0201e-60
whrd_2016_a04f 2012 5' Root of dessiccated seed 559bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 6.52604e-101
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