Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 11072
First Previous 1-100 101-200 201-300 301-400 401-500 501-600 601-700 701-800 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ312417 whyf10a01 2002 5' Spikelet at early flowering 631bp Contig15749 Contig15749 O24415 GO:0003735 structural constituent of ribosome acidic ribosomal protein [Triticum aestivum] 242 5.03233e-19
BJ312418 whyf10a09 2002 5' Spikelet at early flowering 616bp Contig9689 Contig9689 P21461 P21461 P21461 GO:0005634 GO:0007275 GO:0007601 nucleus ,  development ,  vision Ubiquitin ligase SINAT5, putative, expressed [Oryza sativa (japonica cultivar-group)] 793 6.16133e-83
BJ312419 whyf10a18 2002 5' Spikelet at early flowering 564bp Contig15696 Contig15696 P59258 P59258 P59258 P59258 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome unknown [Zea mays] 410 1.2437e-38
BJ312420 whyf10a19 2002 5' Spikelet at early flowering 607bp Contig15437 Contig15437 O64464 O64464 O64464 GO:0005829 GO:0008233 GO:0016787 cytosol ,  peptidase activity ,  hydrolase activity unknown [Zea mays] 903 1.04037e-95
BJ312421 whyf10a20 2002 5' Spikelet at early flowering 542bp Contig14353 Contig14353 Q9GZW5 GO:0005634 nucleus Rpr4901.2 [Hordeum vulgare subsp. vulgare] 273 8.64963e-23
BJ312422 whyf10a22 2002 5' Spikelet at early flowering 652bp Contig15361 Contig15361 Q39366 GO:0016829 lyase activity hypothetical protein OsJ_025258 [Oryza sativa (japonica cultivar-group)] 953 1.93928e-101
BJ312423 whyf10a23 2002 5' Spikelet at early flowering 710bp Contig15242 Contig15242 Q43697 GO:0005525 GTP binding hypothetical protein OsJ_017784 [Oryza sativa (japonica cultivar-group)] 1056 2.64088e-113
BJ312424 whyf10a24 2002 5' Spikelet at early flowering 608bp Contig14593 Contig14593 Q01081 Q01081 Q01081 GO:0003723 GO:0005634 GO:0006371 RNA binding ,  nucleus ,  mRNA splicing U2AF small subunit [Triticum aestivum] 911 1.22895e-96
BJ312425 whyf10b01 2002 5' Spikelet at early flowering 680bp Contig4497 Contig4497 Q88C93 Q88C93 Q88C93 Q88C93 Q88C93 GO:0000287 GO:0003824 GO:0009103 GO:0016853 GO:0042121 magnesium ion binding ,  catalytic activity ,  lipopolysaccharide biosynthesis ,  isomerase activity ,  alginic acid biosynthesis hypothetical protein OsI_024942 [Oryza sativa (indica cultivar-group)] 846 5.44179e-89
BJ312426 whyf10b02 2002 5' Spikelet at early flowering 691bp Contig15784 Contig15784 Q9M352 GO:0003735 structural constituent of ribosome ribosomal protein L36 [Triticum aestivum] 492 6.3404e-48
BJ312427 whyf10b04 2002 5' Spikelet at early flowering 592bp Contig16064 Contig16064 Q03033 Q03033 Q03033 GO:0003746 GO:0005525 GO:0006412 translation elongation factor activity ,  GTP binding ,  protein biosynthesis Elongation factor 1-alpha (EF-1-alpha) 940 4.97059e-100
BJ312428 whyf10b07 2002 5' Spikelet at early flowering 656bp Contig16256 Contig16256 P49397 GO:0003735 structural constituent of ribosome cyc07 [Triticum aestivum] 934 3.16729e-99
BJ312429 whyf10b08 2002 5' Spikelet at early flowering 636bp Contig15724 Contig15724 P46779 GO:0003735 structural constituent of ribosome hypothetical protein OsI_009289 [Oryza sativa (indica cultivar-group)] 655 6.56161e-67
BJ312430 whyf10b09 2002 5' Spikelet at early flowering 667bp Contig15946 Contig15946 P29546 P29546 GO:0003746 GO:0006412 translation elongation factor activity ,  protein biosynthesis Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor 1-beta') (EF-1-beta') 567 1.15987e-56
BJ312431 whyf10b12 2002 5' Spikelet at early flowering 636bp Contig134 Contig134 P17844 P17844 P17844 P17844 GO:0003723 GO:0004386 GO:0005524 GO:0005634 RNA binding ,  helicase activity ,  ATP binding ,  nucleus hypothetical protein OsI_001445 [Oryza sativa (indica cultivar-group)] 745 2.40389e-77
BJ312432 whyf10b14 2002 5' Spikelet at early flowering 738bp Contig15016 Contig15016 P23901 GO:0016491 oxidoreductase activity Os05g0456300 [Oryza sativa (japonica cultivar-group)] 788 3.41854e-82
BJ312433 whyf10b15 2002 5' Spikelet at early flowering 557bp Contig16284 Contig16284 P59258 P59258 P59258 P59258 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome unknown [Zea mays] 428 1.00503e-40
BJ312434 whyf10b16 2002 5' Spikelet at early flowering 657bp Q9NU22 Q9NU22 Q9NU22 GO:0003754 GO:0005524 GO:0005634 chaperone activity ,  ATP binding ,  nucleus hypothetical protein OsI_032740 [Oryza sativa (indica cultivar-group)] 584 1.21761e-58
BJ312435 whyf10b17 2002 5' Spikelet at early flowering 103bp            
BJ312436 whyf10b19 2002 5' Spikelet at early flowering 254bp Contig14509 Contig14509 Q9SEL7 Q9SEL7 Q9SEL7 Q9SEL7 GO:0004252 GO:0009507 GO:0009579 GO:0016787 serine-type endopeptidase activity ,  chloroplast ,  thylakoid ,  hydrolase activity      
BJ312437 whyf10b21 2002 5' Spikelet at early flowering 650bp Contig16104 Contig16104 P03993 GO:0005634 nucleus Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 5.5161e-64
BJ312438 whyf10b22 2002 5' Spikelet at early flowering 671bp Contig16283 Contig16283       Translationally-controlled tumor protein homolog (TCTP) 808 1.34371e-84
BJ312439 whyf10b24 2002 5' Spikelet at early flowering 588bp Contig9191 Contig9191 Q02847 Q02847 Q02847 Q02847 GO:0009507 GO:0015078 GO:0015992 GO:0016021 chloroplast ,  hydrogen ion transporter activity ,  proton transport ,  integral to membrane putative exported uslfatase [Lentisphaera araneosa HTCC2155] 78 4.41246
BJ312440 whyf10c01 2002 5' Spikelet at early flowering 342bp Contig15849 Contig15849       CS0DF038YO05 variant [Homo sapiens] 77 3.29785
BJ312441 whyf10c02 2002 5' Spikelet at early flowering 659bp Contig16253 Contig16253 P31007 P31007 GO:0004871 GO:0007165 signal transducer activity ,  signal transduction proteophosphoglycan 5 [Leishmania major strain Friedlin] 102 0.00958195
BJ312442 whyf10c04 2002 5' Spikelet at early flowering 616bp Contig14552 Contig14552 Q9S7C9 GO:0003677 DNA binding Os02g0824300 [Oryza sativa (japonica cultivar-group)] 745 2.23828e-77
BJ312443 whyf10c08 2002 5' Spikelet at early flowering 709bp Contig9858 Contig9858 O60841 O60841 O60841 GO:0003743 GO:0005525 GO:0006412 translation initiation factor activity ,  GTP binding ,  protein biosynthesis hypothetical protein OsJ_018964 [Oryza sativa (japonica cultivar-group)] 904 1.1147e-95
BJ312444 whyf10c10 2002 5' Spikelet at early flowering 662bp Contig4492 Contig4492 Q63396 Q63396 Q63396 Q63396 GO:0003677 GO:0005634 GO:0006350 GO:0006355 DNA binding ,  nucleus ,  transcription ,  regulation of transcription, DNA-dependent hypothetical protein OsJ_003084 [Oryza sativa (japonica cultivar-group)] 301 8.14487e-26
BJ312445 whyf10c12 2002 5' Spikelet at early flowering 619bp Contig11754 Contig11754 P98160 P98160 GO:0005578 GO:0005604 extracellular matrix ,  basement membrane hypothetical protein OsI_010315 [Oryza sativa (indica cultivar-group)] 810 6.6683e-85
BJ312446 whyf10c13 2002 5' Spikelet at early flowering 433bp Contig4490 Contig4490 O86225 GO:0016021 integral to membrane unnamed protein product [Kluyveromyces lactis] 169 7.15515e-11
BJ312447 whyf10c18 2002 5' Spikelet at early flowering 659bp Contig15929 Contig15929 P35685 GO:0003735 structural constituent of ribosome Os08g0326400 [Oryza sativa (japonica cultivar-group)] 929 1.21709e-98
BJ312448 whyf10c21 2002 5' Spikelet at early flowering 365bp Contig10841 Contig10841 P01383 P01383 GO:0015070 GO:0015070 toxin activity ,  toxin activity unknown [Zea mays] 212 7.34182e-16
BJ312449 whyf10c22 2002 5' Spikelet at early flowering 595bp Contig16066 Contig16066 Q9SS17 GO:0003735 structural constituent of ribosome unknown [Zea mays] 602 7.87041e-61
BJ312450 whyf10c23 2002 5' Spikelet at early flowering 524bp Contig12969 Contig12969 P59258 P59258 P59258 P59258 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome predicted protein [Nematostella vectensis] 408 1.74835e-38
BJ312451 whyf10d02 2002 5' Spikelet at early flowering 627bp Contig16221 Contig16221 P27322 P27322 GO:0003773 GO:0005524 heat shock protein activity ,  ATP binding PsHSC71.0 [Pisum sativum] 904 8.46494e-96
BJ312452 whyf10d03 2002 5' Spikelet at early flowering 675bp Contig15080 Contig15080 O00567 O00567 GO:0005634 GO:0007046 nucleus ,  ribosome biogenesis Os07g0661800 [Oryza sativa (japonica cultivar-group)] 952 2.72393e-101
BJ312453 whyf10d05 2002 5' Spikelet at early flowering 615bp Contig8594 Contig8594 P44706 P44706 P44706 P44706 P44706 GO:0006810 GO:0006814 GO:0015297 GO:0016021 GO:0019866 transport ,  sodium ion transport ,  antiporter activity ,  integral to membrane ,  inner membrane hypothetical protein [Lilium longiflorum] 285 8.51203e-29
BJ312454 whyf10d07 2002 5' Spikelet at early flowering 277bp Contig13016 Contig13016 Q38935 Q38935 Q38935 Q38935 GO:0003755 GO:0005783 GO:0006457 GO:0016853 peptidyl-prolyl cis-trans isomerase activity ,  endoplasmic reticulum ,  protein folding ,  isomerase activity hypothetical protein OsJ_028748 [Oryza sativa (japonica cultivar-group)] 103 0.00320224
BJ312455 whyf10d08 2002 5' Spikelet at early flowering 233bp Contig16237 Contig16237       unnamed protein product [Arabidopsis thaliana] 82 0.884607
BJ312456 whyf10d10 2002 5' Spikelet at early flowering 625bp Contig11642 Contig11642 O74484 O74484 O74484 O74484 GO:0007049 GO:0016301 GO:0016740 GO:0016779 cell cycle ,  kinase activity ,  transferase activity ,  nucleotidyltransferase activity hypothetical protein OsI_004331 [Oryza sativa (indica cultivar-group)] 723 8.23708e-75
BJ312457 whyf10d12 2002 5' Spikelet at early flowering 635bp Contig15538 Contig15538 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.3 434 2.77604e-41
BJ312458 whyf10d13 2002 5' Spikelet at early flowering 482bp Contig4489 Contig4489       hypothetical protein OsJ_016189 [Oryza sativa (japonica cultivar-group)] 113 0.000221457
BJ312459 whyf10d22 2002 5' Spikelet at early flowering 626bp Contig16155 Contig16155 P38548 P38548 P38548 P38548 P38548 GO:0005525 GO:0005634 GO:0006886 GO:0008565 GO:0015031 GTP binding ,  nucleus ,  intracellular protein transport ,  protein transporter activity ,  protein transport small Ras-related GTP-binding protein [Triticum aestivum] 1013 1.94246e-108
BJ312460 whyf10d23 2002 5' Spikelet at early flowering 623bp Contig16246 Contig16246 P46252 GO:0003735 structural constituent of ribosome acidic ribosomal protein P2 [Triticum aestivum] 312 3.76659e-27
BJ312461 whyf10e01 2002 5' Spikelet at early flowering 554bp Contig15215 Contig15215 Q9T034 Q9T034 Q9T034 Q9T034 GO:0004812 GO:0005524 GO:0006412 GO:0016874 tRNA ligase activity ,  ATP binding ,  protein biosynthesis ,  ligase activity unknown [Zea mays] 666 2.49504e-68
BJ312462 whyf10e02 2002 5' Spikelet at early flowering 654bp       mCG116117 [Mus musculus] 93 0.103587
BJ312463 whyf10e03 2002 5' Spikelet at early flowering 666bp Contig16291 Contig16291 P02275 P02275 P02275 P02275 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Protein H2A.5 (wcH2A-2) 494 3.38256e-48
BJ312464 whyf10e04 2002 5' Spikelet at early flowering 709bp Contig9285 Contig9285 O24308 O24308 O24308 O24308 GO:0003677 GO:0003916 GO:0005524 GO:0016853 DNA binding ,  DNA topoisomerase activity ,  ATP binding ,  isomerase activity hypothetical protein OsJ_007774 [Oryza sativa (japonica cultivar-group)] 334 1.39461e-29
BJ312465 whyf10e06 2002 5' Spikelet at early flowering 581bp Contig15329 Contig15329 Q96564 GO:0003735 structural constituent of ribosome 40S ribosomal protein S27 (Manganese efficiency-related protein 1) 403 8.86755e-38
BJ312466 whyf10e07 2002 5' Spikelet at early flowering 647bp Contig8588 Contig8588 O19049 O19049 O19049 O19049 GO:0003677 GO:0003723 GO:0005634 GO:0030529 DNA binding ,  RNA binding ,  nucleus ,  ribonucleoprotein complex unknown [Zea mays] 558 1.21755e-55
BJ312467 whyf10e08 2002 5' Spikelet at early flowering 669bp Contig16204 Contig16204 Q03033 Q03033 Q03033 GO:0003746 GO:0005525 GO:0006412 translation elongation factor activity ,  GTP binding ,  protein biosynthesis Elongation factor 1-alpha (EF-1-alpha) 813 3.53608e-85
BJ312468 whyf10e10 2002 5' Spikelet at early flowering 634bp Contig16168 Contig16168 Q97QX6 Q97QX6 Q97QX6 GO:0006099 GO:0015977 GO:0016829 tricarboxylic acid cycle ,  carbon utilization by fixation of carbon dioxide ,  lyase activity hypothetical protein OsI_037534 [Oryza sativa (indica cultivar-group)] 368 1.23377e-33
BJ312469 whyf10e11 2002 5' Spikelet at early flowering 661bp Contig14895 Contig14895       TaWIN2 [Triticum aestivum] 611 9.21149e-62
BJ312470 whyf10e12 2002 5' Spikelet at early flowering 604bp Contig11718 Contig11718 P10470 P10470 GO:0005198 GO:0019028 structural molecule activity ,  viral capsid hypothetical protein Franean1_1727 [Frankia sp. EAN1pec] 84 0.954453
BJ312471 whyf10e15 2002 5' Spikelet at early flowering 673bp Contig14787 Contig14787 P93087 GO:0005509 calcium ion binding calmodulin TaCaM2-2 763 2.24388e-79
BJ312472 whyf10e17 2002 5' Spikelet at early flowering 441bp Contig13760 Contig13760 P58196 P58196 GO:0005509 GO:0016021 calcium ion binding ,  integral to membrane hypothetical protein OsI_001899 [Oryza sativa (indica cultivar-group)] 97 0.0158425
BJ312473 whyf10e19 2002 5' Spikelet at early flowering 567bp Contig9381 Contig9381 O16098 O16098 O16098 GO:0005975 GO:0016787 GO:0016798 carbohydrate metabolism ,  hydrolase activity ,  hydrolase activity, acting on glycosyl bonds Os05g0486200 [Oryza sativa (japonica cultivar-group)] 352 6.83029e-32
BJ312474 whyf10e21 2002 5' Spikelet at early flowering 669bp Contig16291 Contig16291       unnamed protein product [Ostreococcus tauri] 134 1.89835e-06
BJ312475 whyf10e22 2002 5' Spikelet at early flowering 585bp Contig14392 Contig14392 Q09690