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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4978
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_1015_a01f 2012 5' Dormant seed with water absorption after breaking 253bp       LOC568678protein[Daniorerio] 39 0.595333
whei_12015_a01f 2012 5' Dormant seed with water absorption after breaking 326bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 7.0559e-55
whei_13015_a01f 2012 5' Dormant seed with water absorption after breaking 494bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.0241e-82
whei_14015_a01f 2012 5' Dormant seed with water absorption after breaking 484bp       PREDICTED:proteinFAR1-RELATEDSEQUENCE6-like[Brachypodiumdistachyon] 44 0.0137232
whei_15015_a01f 2012 5' Dormant seed with water absorption after breaking 466bp Contig10840       glutathioneS-transferase[Triticumaestivum] 298 4.14691e-79
whei_19015_a01f 2012 5' Dormant seed with water absorption after breaking 484bp       hypotheticalprotein[Triticumaestivum] 309 3.06574e-82
whei_20015_a01f 2012 5' Dormant seed with water absorption after breaking 53bp            
whei_2015_a01f 2012 5' Dormant seed with water absorption after breaking 333bp       RNA-bindingprotein[Synechococcussp.RCC307] 63 2.19913e-08
whei_3015_a01f 2012 5' Dormant seed with water absorption after breaking 455bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.78567e-49
whei_5015_a01f 2012 5' Dormant seed with water absorption after breaking 420bp       hypotheticalproteinBra471DRAFT_04713[Bradyrhizobiumsp.WSM471] 50 0.00019702
whei_6015_a01f 2012 5' Dormant seed with water absorption after breaking 246bp Contig1071       predictedprotein[MicromonaspusillaCCMP1545] 88 6.37718e-16
whei_9015_a01f 2012 5' Dormant seed with water absorption after breaking 400bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.28747e-68
whei_10015_a02f 2012 5' Dormant seed with water absorption after breaking 442bp       Af10-protein[Avenafatua] 226 1.94746e-57
whei_1015_a02f 2012 5' Dormant seed with water absorption after breaking 584bp       relatedtocarbonrepressorprotein1(N-terminalfragment),partial[Ustilagohordei] 43 0.000154924
whei_12015_a02f 2012 5' Dormant seed with water absorption after breaking 350bp       11-beta-hydroxysteroiddehydrogenase-likeprotein[Triticumaestivum] 203 1.80603e-50
whei_14015_a02f 2012 5' Dormant seed with water absorption after breaking 437bp Contig2337       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.7772e-42
whei_18015_a02f 2012 5' Dormant seed with water absorption after breaking 377bp Contig1060       ES1A[Hordeumvulgare] 44 0.0182874
whei_20015_a02f 2012 5' Dormant seed with water absorption after breaking 170bp       conservedexportedhypotheticalprotein[PhaeospirillummolischianumDSM120] 41 0.153203
whei_2015_a02f 2012 5' Dormant seed with water absorption after breaking 386bp Contig1779       PREDICTED:zincfingerCCCHdomain-containingprotein49-like[Brachypodiumdistachyon] 269 2.02472e-70
whei_3015_a02f 2012 5' Dormant seed with water absorption after breaking 419bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.38599e-66
whei_4015_a02f 2012 5' Dormant seed with water absorption after breaking 318bp Contig28195       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.21709e-54
whei_6015_a02f 2012 5' Dormant seed with water absorption after breaking 504bp       uncharacterizedproteinLOC100381827[Zeamays] 40 0.202926
whei_7015_a02f 2012 5' Dormant seed with water absorption after breaking 408bp Contig4519       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 1.92153e-36
whei_8015_a02f 2012 5' Dormant seed with water absorption after breaking 379bp       PREDICTED:probableS-acyltransferaseAt3g26935-like[Brachypodiumdistachyon] 120 2.62239e-25
whei_9015_a02f 2012 5' Dormant seed with water absorption after breaking 401bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 2.36276e-42
whei_10016_a03f 2012 5' Dormant seed with water absorption after breaking 503bp Contig12916       PREDICTED:uncharacterizedproteinLOC100826288[Brachypodiumdistachyon] 309 2.98245e-82
whei_12016_a03f 2012 5' Dormant seed with water absorption after breaking 404bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 4.70849e-67
whei_13016_a03f 2012 5' Dormant seed with water absorption after breaking 514bp Contig35916       MBD1[Triticumaestivum] 329 2.2209e-88
whei_14016_a03f 2012 5' Dormant seed with water absorption after breaking 489bp Contig17298       heatshockprotein90[Triticumaestivum] 200 1.16519e-49
whei_15016_a03f 2012 5' Dormant seed with water absorption after breaking 357bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.00899e-61
whei_16016_a03f 2012 5' Dormant seed with water absorption after breaking 483bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 316 2.50793e-84
whei_17016_a03f 2012 5' Dormant seed with water absorption after breaking 315bp Contig5332       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 5.29159e-50
whei_19016_a03f 2012 5' Dormant seed with water absorption after breaking 497bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 288 4.21016e-76
whei_3016_a03f 2012 5' Dormant seed with water absorption after breaking 589bp Contig12054       hypotheticalproteinBP354A_1954[Burkholderiapseudomallei354a] 36 7.56698
whei_6016_a03f 2012 5' Dormant seed with water absorption after breaking 382bp       predictedprotein[PostiaplacentaMad-698-R] 43 0.0237893
whei_9016_a03f 2012 5' Dormant seed with water absorption after breaking 517bp Contig12301       Chain6,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 248 6.66567e-64
whei_10016_a04f 2012 5' Dormant seed with water absorption after breaking 576bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 5.36216e-96
whei_13016_a04f 2012 5' Dormant seed with water absorption after breaking 263bp Contig1037       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 6.05447e-22
whei_14016_a04f 2012 5' Dormant seed with water absorption after breaking 490bp       HSP70,partial[Triticumaestivum] 312 2.76029e-83
whei_17016_a04f 2012 5' Dormant seed with water absorption after breaking 314bp       predictedprotein[ThalassiosirapseudonanaCCMP1335] 42 0.0678888
whei_18016_a04f 2012 5' Dormant seed with water absorption after breaking 501bp       PREDICTED:probableleucine-richrepeatreceptor-likeproteinkinaseAt5g63930-like[Brachypodiumdistachyon] 298 4.0309e-79
whei_19016_a04f 2012 5' Dormant seed with water absorption after breaking 561bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.53289e-97
whei_20016_a04f 2012 5' Dormant seed with water absorption after breaking 362bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 206 2.10055e-51
whei_2016_a04f 2012 5' Dormant seed with water absorption after breaking 485bp Contig10794       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 5.57415e-92
whei_3016_a04f 2012 5' Dormant seed with water absorption after breaking 367bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.23548e-53
whei_4016_a04f 2012 5' Dormant seed with water absorption after breaking 461bp       putativedolichyl-phosphate-mannose-proteinmannosyltransferase[AchromobacterxylosoxidansAXX-A] 38 0.753122
whei_5016_a04f 2012 5' Dormant seed with water absorption after breaking 576bp Contig12688       14-3-3protein[Triticumaestivum] 337 1.13742e-90
whei_6016_a04f 2012 5' Dormant seed with water absorption after breaking 408bp       unnamedproteinproduct[Vitisvinifera] 104 9.84536e-30
whei_7016_a04f 2012 5' Dormant seed with water absorption after breaking 474bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 142 3.73622e-32
whei_9016_a04f 2012 5' Dormant seed with water absorption after breaking 371bp Contig16204       hypotheticalprotein[Zeamays] 116 2.23761e-24
whei_10031_a05f 2012 5' Dormant seed with water absorption after breaking 478bp Contig4011       S-adenosylmethioninedecarboxylase[Triticumaestivum] 328 4.80107e-88
whei_1031_a05f 2012 5' Dormant seed with water absorption after breaking 402bp Contig26423       predictedprotein[Hordeumvulgaresubsp.vulgare] 246 1.85915e-63
whei_14031_a05f 2012 5' Dormant seed with water absorption after breaking 502bp Contig6424       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitbeta,chloroplastic;AltName:Full=60kDachaperoninsubunitbeta;AltName:Full=CPN-60beta 269 3.43621e-70
whei_17031_a05f 2012 5' Dormant seed with water absorption after breaking 505bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 147 1.5394e-33
whei_18031_a05f 2012 5' Dormant seed with water absorption after breaking 577bp Contig3148       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 5.65806e-82
whei_19031_a05f 2012 5' Dormant seed with water absorption after breaking 564bp Contig15075       PREDICTED:uncharacterizedproteinLOC100832710[Brachypodiumdistachyon] 96 5.59178e-18
whei_20031_a05f 2012 5' Dormant seed with water absorption after breaking 390bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 2.38212e-71
whei_5031_a05f 2012 5' Dormant seed with water absorption after breaking 538bp Contig6257       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 380 1.63486e-103
whei_7031_a05f 2012 5' Dormant seed with water absorption after breaking 409bp Contig26399       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 1.55098e-70
whei_8031_a05f 2012 5' Dormant seed with water absorption after breaking 576bp Contig8521       putativeimmunophilin[Hordeumvulgaresubsp.vulgare] 288 6.05915e-76
whei_10031_a06f 2012 5' Dormant seed with water absorption after breaking 464bp Contig31853       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 289 2.51584e-76
whei_14031_a06f 2012 5' Dormant seed with water absorption after breaking 559bp Contig9636       PREDICTED:60SribosomalproteinL35a-3-likeisoform1[Brachypodiumdistachyon] 222 4.98864e-56
whei_15031_a06f 2012 5' Dormant seed with water absorption after breaking 141bp       unknown[Lotusjaponicus] 36 4.88194
whei_16031_a06f 2012 5' Dormant seed with water absorption after breaking 485bp       hypotheticalproteinAOL_s00080g439[ArthrobotrysoligosporaATCC24927] 89 2.92318e-16
whei_18031_a06f 2012 5' Dormant seed with water absorption after breaking 499bp Contig5562       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 292 2.22213e-77
whei_2031_a06f 2012 5' Dormant seed with water absorption after breaking 524bp       GlydMald3-likeprotein[Glycyphagusdomesticus] 240 1.84972e-61
whei_4031_a06f 2012 5' Dormant seed with water absorption after breaking 176bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.50257e-25
whei_8031_a06f 2012 5' Dormant seed with water absorption after breaking 67bp Contig4030       PREDICTED:FK506-bindingprotein2-1-likeisoform2[Brachypodiumdistachyon] 49 0.000365982
whei_9031_a06f 2012 5' Dormant seed with water absorption after breaking 579bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 2.11841e-76
whei_1032_a07f 2012 5' Dormant seed with water absorption after breaking 474bp       hypotheticalproteinOsI_22556[OryzasativaIndicaGroup] 144 1.28988e-32
whei_13032_a07f 2012 5' Dormant seed with water absorption after breaking 585bp Contig6056       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 344 9.94638e-93
whei_15032_a07f 2012 5' Dormant seed with water absorption after breaking 360bp Contig10941       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.12597e-28
whei_17032_a07f 2012 5' Dormant seed with water absorption after breaking 557bp Contig12312       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 9.46739e-84
whei_19032_a07f 2012 5' Dormant seed with water absorption after breaking 205bp            
whei_3032_a07f 2012 5' Dormant seed with water absorption after breaking 545bp       PREDICTED:uncharacterizedproteinLOC100838291[Brachypodiumdistachyon] 302 2.63542e-80
whei_4032_a07f 2012 5' Dormant seed with water absorption after breaking 607bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 43 0.0396126
whei_5032_a07f 2012 5' Dormant seed with water absorption after breaking 561bp       hypotheticalproteinOsJ_07864[OryzasativaJaponicaGroup] 252 4.50158e-65
whei_6032_a07f 2012 5' Dormant seed with water absorption after breaking 556bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 228 1.02087e-61
whei_7032_a07f 2012 5' Dormant seed with water absorption after breaking 604bp Contig8824       PREDICTED:ubiquitin-conjugatingenzymeE2-17kDa-likeisoform1[Brachypodiumdistachyon] 314 1.16778e-83
whei_8032_a07f 2012 5' Dormant seed with water absorption after breaking 560bp Contig17048       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.53289e-97
whei_10032_a08f 2012 5' Dormant seed with water absorption after breaking 556bp Contig16226       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 8.88179e-74
whei_13032_a08f 2012 5' Dormant seed with water absorption after breaking 520bp Contig1706       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 307 7.0554e-82
whei_14032_a08f 2012 5' Dormant seed with water absorption after breaking 525bp Contig8091       translationinitiationfactor[Triticumaestivum] 232 5.03728e-59
whei_15032_a08f 2012 5' Dormant seed with water absorption after breaking 563bp Contig8379       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.84531e-99
whei_16032_a08f 2012 5' Dormant seed with water absorption after breaking 398bp Contig9275       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 247 1.09439e-63
whei_17032_a08f 2012 5' Dormant seed with water absorption after breaking 536bp Contig6056       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 315 4.94532e-84
whei_18032_a08f 2012 5' Dormant seed with water absorption after breaking 487bp       PREDICTED:uncharacterizedproteinLOC100834019[Brachypodiumdistachyon] 100 1.65604e-19
whei_19032_a08f 2012 5' Dormant seed with water absorption after breaking 571bp Contig19312       cytoplasmaticribosomalproteinS13[Triticumaestivum] 299 4.32856e-79
whei_20032_a08f 2012 5' Dormant seed with water absorption after breaking 619bp Contig28961       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 4.11717e-66
whei_2032_a08f 2012 5' Dormant seed with water absorption after breaking 337bp Contig11608       GL20013[Drosophilapersimilis] 41 0.0891515
whei_3032_a08f 2012 5' Dormant seed with water absorption after breaking 476bp       PREDICTED:uncharacterizedproteinLOC100838291[Brachypodiumdistachyon] 278 5.6977e-73
whei_4032_a08f 2012 5' Dormant seed with water absorption after breaking 425bp Contig7339       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 260 9.51824e-68
whei_7032_a08f 2012 5' Dormant seed with water absorption after breaking 289bp Contig8824       PREDICTED:ubiquitin-conjugatingenzymeE2-17kDa-likeisoform1[Brachypodiumdistachyon] 203 2.3778e-50
whei_1047_a09f 2012 5' Dormant seed with water absorption after breaking 523bp Contig4328       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.51668e-55
whei_11047_a09f 2012 5' Dormant seed with water absorption after breaking 87bp            
whei_12047_a09f 2012 5' Dormant seed with water absorption after breaking 527bp Contig13951       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 297 9.98973e-79
whei_14047_a09f 2012 5' Dormant seed with water absorption after breaking 571bp Contig9283       S-adenosylmethioninedecarboxylase[Triticummonococcum] 393 1.71655e-107
whei_15047_a09f 2012 5' Dormant seed with water absorption after breaking 59bp Contig9496       hypotheticalproteinEGK_13230,partial[Macacamulatta] 39 0.447531
whei_16047_a09f 2012 5' Dormant seed with water absorption after breaking 534bp       hypotheticalproteinOsI_18129[OryzasativaIndicaGroup] 292 4.38785e-77
whei_17047_a09f 2012 5' Dormant seed with water absorption after breaking 554bp Contig8878       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.15636e-56
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