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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4875
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_4002_a01r 2012 3' Crown of seedling 172bp Contig36208       hypotheticalproteinBACEGG_02117[BacteroideseggerthiiDSM20697] 39 0.444333
whdl_11001_a01r 2012 3' Crown of seedling 81bp Contig8664            
whdl_21001_a01r 2012 3' Crown of seedling 527bp       RecName:Full=HistoneH2B.2 232 3.02181e-59
whdl_5001_a01r 2012 3' Crown of seedling 433bp Contig1832       PREDICTED:histoneH2B.5-likeisoform1[Brachypodiumdistachyon] 203 1.78066e-50
whdl_6001_a01r 2012 3' Crown of seedling 515bp Contig32504       Os07g0150200[OryzasativaJaponicaGroup] 236 2.55878e-60
whdl_1001_a01r 2012 3' Crown of seedling 170bp Contig29294            
whdl_14001_a01r 2012 3' Crown of seedling 398bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 207 1.25505e-51
whdl_16001_a01r 2012 3' Crown of seedling 368bp Contig10002       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.0921e-35
whdl_20001_a01r 2012 3' Crown of seedling 195bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.10548e-23
whdl_24002_a01r 2012 3' Crown of seedling 550bp Contig9367       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit10-B-like[Brachypodiumdistachyon] 228 6.57435e-58
whdl_26001_a01r 2012 3' Crown of seedling 432bp Contig783       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 4.5282e-54
whdl_3002_a01r 2012 3' Crown of seedling 366bp       Chaint,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 151 6.1161e-35
whdl_4018_a02r 2012 3' Crown of seedling 66bp Contig8997            
whdl_6017_a02r 2012 3' Crown of seedling 484bp Contig3224       dolichyl-diphosphooligosaccharide--proteinglycosyltransferase,putative,expressed[Triticumaestivum] 164 1.21963e-38
whdl_1017_a02r 2012 3' Crown of seedling 417bp Contig11863       elongationfactor-1alpha,partial[Triticumaestivum] 178 4.66359e-43
whdl_12017_a02r 2012 3' Crown of seedling 438bp Contig8187       trehalosesynthase,putative,expressed[Triticumaestivum] 46 0.0027738
whdl_13017_a02r 2012 3' Crown of seedling 498bp Contig2272       ChainK,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 237 8.52263e-61
whdl_14017_a02r 2012 3' Crown of seedling 414bp Contig6168       PREDICTED:histoneH4-like[Glycinemax] 205 4.65278e-51
whdl_18017_a02r 2012 3' Crown of seedling 512bp       PREDICTED:ATP-citratesynthasebetachainprotein1-like[Brachypodiumdistachyon] 161 5.98327e-38
whdl_22017_a02r 2012 3' Crown of seedling 566bp       PREDICTED:uncharacterizedproteinLOC100844407[Brachypodiumdistachyon] 239 3.13133e-61
whdl_23018_a02r 2012 3' Crown of seedling 241bp Contig11304            
whdl_24018_a02r 2012 3' Crown of seedling 492bp Contig29516       CytHSP70[Triticumaestivum] 269 2.04249e-70
whdl_25017_a02r 2012 3' Crown of seedling 492bp Contig355       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 3.13672e-71
whdl_5033_a03r 2012 3' Crown of seedling 502bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 8.21677e-56
whdl_7033_a03r 2012 3' Crown of seedling 553bp Contig3307       PREDICTED:T-complexprotein1subunitzeta-like[Brachypodiumdistachyon] 256 2.29854e-66
whdl_1033_a03r 2012 3' Crown of seedling 287bp       RecName:Full=70kDapeptidyl-prolylisomerase;AltName:Full=Peptidyl-prolylcis-transisomerase;Short=PPIase;AltName:Full=Rotamase 62 5.01585e-08
whdl_12033_a03r 2012 3' Crown of seedling 592bp Contig28346       PREDICTED:40SribosomalproteinS3a-like[Brachypodiumdistachyon] 272 6.47588e-71
whdl_13033_a03r 2012 3' Crown of seedling 479bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 6.98212e-47
whdl_14033_a03r 2012 3' Crown of seedling 544bp Contig337       PREDICTED:uncharacterizedproteinLOC100831688[Brachypodiumdistachyon] 84 1.92404e-14
whdl_16033_a03r 2012 3' Crown of seedling 119bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00282568
whdl_17033_a03r 2012 3' Crown of seedling 251bp Contig122       60SribosomalproteinL18-likeprotein[Miscanthussinensis] 71 8.01168e-11
whdl_18033_a03r 2012 3' Crown of seedling 532bp Contig338       predictedprotein[Hordeumvulgaresubsp.vulgare] 99 5.45157e-19
whdl_19033_a03r 2012 3' Crown of seedling 556bp Contig12266       RecName:Full=DehydrinCOR410;AltName:Full=Cold-inducedCOR410protein 273 2.37311e-71
whdl_20033_a03r 2012 3' Crown of seedling 190bp Contig6053            
whdl_22033_a03r 2012 3' Crown of seedling 360bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 59 4.1473e-07
whdl_23034_a03r 2012 3' Crown of seedling 494bp       PREDICTED:shikimatekinase,chloroplastic-like[Brachypodiumdistachyon] 142 4.8957e-32
whdl_26033_a03r 2012 3' Crown of seedling 503bp Contig570       reversiblyglycosylatedpolypeptide[Triticumaestivum] 283 1.34187e-74
whdl_8033_a03r 2012 3' Crown of seedling 547bp Contig11863       elongationfactor-1alpha,partial[Triticumaestivum] 253 1.87099e-65
whdl_6049_a04r 2012 3' Crown of seedling 490bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 197 1.28827e-48
whdl_9049_a04r 2012 3' Crown of seedling 149bp Contig22987       hypotheticalprotein[MonosigabrevicollisMX1] 44 0.018501
whdl_12049_a04r 2012 3' Crown of seedling 526bp Contig23497       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 1.00828e-46
whdl_13049_a04r 2012 3' Crown of seedling 430bp Contig9084       RecName:Full=ADP,ATPcarrierprotein1,mitochondrial;AltName:Full=ADP/ATPtranslocase1;AltName:Full=Adeninenucleotidetranslocator1;Short=ANT1;Flags:Precursor 107 1.74415e-21
whdl_14049_a04r 2012 3' Crown of seedling 108bp            
whdl_15049_a04r 2012 3' Crown of seedling 43bp            
whdl_16049_a04r 2012 3' Crown of seedling 542bp Contig31319       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 3.7293e-50
whdl_17049_a04r 2012 3' Crown of seedling 522bp Contig9739       PREDICTED:smallnuclearribonucleoproteinSmD3-like[Brachypodiumdistachyon] 216 2.13915e-54
whdl_20049_a04r 2012 3' Crown of seedling 201bp            
whdl_22049_a04r 2012 3' Crown of seedling 378bp Contig9033       PREDICTED:proteinmagonashihomolog[Brachypodiumdistachyon] 142 3.77795e-32
whdl_23050_a04r 2012 3' Crown of seedling 262bp Contig37067       predictedprotein[Hordeumvulgaresubsp.vulgare] 161 1.02796e-37
whdl_3050_a04r 2012 3' Crown of seedling 237bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 135 5.98209e-30
whdl_8049_a04r 2012 3' Crown of seedling 402bp Contig8873       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 6.40464e-56
whdl_5065_a05r 2012 3' Crown of seedling 569bp Contig4901       PREDICTED:26Sproteaseregulatorysubunit6Ahomolog[Brachypodiumdistachyon] 346 3.0877e-93
whdl_1065_a05r 2012 3' Crown of seedling 319bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 117 1.70778e-24
whdl_15065_a05r 2012 3' Crown of seedling 426bp Contig29612       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 4.8771e-72
whdl_16065_a05r 2012 3' Crown of seedling 555bp Contig10002       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 9.01779e-71
whdl_17065_a05r 2012 3' Crown of seedling 206bp       unnamedproteinproduct[Azospirillumlipoferum4B] 36 3.77614
whdl_18065_a05r 2012 3' Crown of seedling 460bp Contig1113       homeobox-likeresistance[Triticumaestivum] 222 4.80298e-56
whdl_19065_a05r 2012 3' Crown of seedling 463bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.78805e-67
whdl_22065_a05r 2012 3' Crown of seedling 284bp Contig37016       histoneH4[Zeamays] 137 1.55067e-30
whdl_4082_a06r 2012 3' Crown of seedling 301bp Contig3203       membraneprotein[Zeamays] 120 1.52975e-25
whdl_10082_a06r 2012 3' Crown of seedling 262bp Contig12343       aminoacidpermease[StreptomycesviridochromogenesDSM40736] 36 2.92392
whdl_5081_a06r 2012 3' Crown of seedling 33bp            
whdl_6081_a06r 2012 3' Crown of seedling 535bp Contig15828       aminotransferase[Triticumaestivum] 267 1.15738e-69
whdl_13081_a06r 2012 3' Crown of seedling 586bp       relatedtoShuttlecraftprotein[SporisoriumreilianumSRZ2] 39 0.893861
whdl_16081_a06r 2012 3' Crown of seedling 306bp Contig36113       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 2.18273e-40
whdl_17081_a06r 2012 3' Crown of seedling 245bp       unnamedproteinproduct[Azospirillumlipoferum4B] 36 3.75604
whdl_18081_a06r 2012 3' Crown of seedling 424bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 2.36627e-34
whdl_19081_a06r 2012 3' Crown of seedling 591bp Contig10295       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 8.02669e-82
whdl_20081_a06r 2012 3' Crown of seedling 117bp            
whdl_23082_a06r 2012 3' Crown of seedling 375bp       S-adenosyl-L-homocysteinehydrolase[Hordeumvulgaresubsp.vulgare] 170 1.29545e-40
whdl_24082_a06r 2012 3' Crown of seedling 488bp Contig7027       plastidglutaminesynthetase2[Triticumaestivum] 166 2.44634e-39
whdl_25081_a06r 2012 3' Crown of seedling 296bp Contig10626       predictedprotein[Hordeumvulgaresubsp.vulgare] 90 2.22213e-16
whdl_26081_a06r 2012 3' Crown of seedling 108bp Contig10626       PREDICTED:endoplasminhomolog[Brachypodiumdistachyon] 46 0.00285994
whdl_8081_a06r 2012 3' Crown of seedling 548bp       PREDICTED:nucleolarprotein56-like[Brachypodiumdistachyon] 338 4.42239e-91
whdl_10002_a07r 2012 3' Crown of seedling 342bp Contig35813       PREDICTED:histoneH2B.3-likeisoform1[Brachypodiumdistachyon] 194 8.19771e-48
whdl_5001_a07r 2012 3' Crown of seedling 529bp Contig25850       conservedhypotheticalprotein[AurantimonasmanganoxydansSI85-9A1] 156 5.15848e-43
whdl_6001_a07r 2012 3' Crown of seedling 467bp Contig35968       histoneH4[Zeamays] 200 1.99849e-49
whdl_7001_a07r 2012 3' Crown of seedling 440bp       histoneH4[Zeamays] 163 1.55024e-38
whdl_9001_a07r 2012 3' Crown of seedling 452bp Contig11419       pollen-specificproteinSF3[Zeamays] 192 3.1617e-47
whdl_1001_a07r 2012 3' Crown of seedling 165bp            
whdl_17001_a07r 2012 3' Crown of seedling 265bp            
whdl_18001_a07r 2012 3' Crown of seedling 333bp       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 111 7.06829e-23
whdl_22001_a07r 2012 3' Crown of seedling 273bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 60 1.86438e-07
whdl_24002_a07r 2012 3' Crown of seedling 517bp Contig24243       predictedprotein[Hordeumvulgaresubsp.vulgare] 168 5.13936e-40
whdl_25001_a07r 2012 3' Crown of seedling 345bp       similartoMitochondrialporin(voltage-dependentanionchannel)[Botryotiniafuckeliana] 123 1.83263e-26
whdl_26001_a07r 2012 3' Crown of seedling 345bp Contig5374       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.14789e-28
whdl_3002_a07r 2012 3' Crown of seedling 319bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 6.48955e-24
whdl_8001_a07r 2012 3' Crown of seedling 235bp Contig10941       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 110 2.06783e-22
whdl_21017_a08r 2012 3' Crown of seedling 460bp Contig340       PREDICTED:40SribosomalproteinS21-like[Brachypodiumdistachyon] 162 3.4733e-38
whdl_11017_a08r 2012 3' Crown of seedling 454bp Contig564       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 6.99664e-55
whdl_22017_a08r 2012 3' Crown of seedling 411bp Contig36542       RecName:Full=HMG1/2-likeprotein 77 1.47543e-12
whdl_23018_a08r 2012 3' Crown of seedling 227bp Contig2395       predictedprotein[Hordeumvulgaresubsp.vulgare] 66 2.64865e-09
whdl_24018_a08r 2012 3' Crown of seedling 546bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 6.21402e-69
whdl_25017_a08r 2012 3' Crown of seedling 544bp Contig3348       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 2.41166e-57
whdl_26017_a08r 2012 3' Crown of seedling 496bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.15014e-51
whdl_3018_a08r 2012 3' Crown of seedling 176bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 0.000147102
whdl_4034_a09r 2012 3' Crown of seedling 93bp       cadmiumtolerancefactor[Triticumaestivum] 62 6.40076e-08
whdl_5033_a09r 2012 3' Crown of seedling 548bp Contig724       multiproteinbridgingfactor1[Triticumaestivum] 242 3.30261e-62
whdl_6033_a09r 2012 3' Crown of seedling 542bp Contig341       predictedprotein[Hordeumvulgaresubsp.vulgare] 189 4.26687e-46
whdl_11033_a09r 2012 3' Crown of seedling 590bp Contig8091       translationinitiationfactor[Triticumaestivum] 229 3.62818e-58
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