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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 12129
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ785073 whatl10a01 3' Root 727bp       glyceraldehyde-3-phosphate dehydrogenase [Triticum aestivum] 981 1.37626e-104
CJ785074 whatl10a02 3' Root 745bp       unknown [Zea mays] 646 1.02556e-65
CJ785075 whatl10a03 3' Root 772bp       Os02g0556400 [Oryza sativa (japonica cultivar-group)] 832 2.94934e-87
CJ785076 whatl10a04 3' Root 580bp       RecName: Full=Histone H3.2 673 4.36028e-69
CJ785077 whatl10a05 3' Root 583bp       Os03g0322500 [Oryza sativa (japonica cultivar-group)] 643 1.33274e-65
CJ785078 whatl10a06 3' Root 288bp       60s ribosomal protein L21 [Triticum aestivum] 227 1.37404e-17
CJ785079 whatl10a07 3' Root 291bp       predicted protein [Monosiga brevicollis MX1] 86 0.305342
CJ785080 whatl10a08 3' Root 405bp       unknown [Zea mays] 95 0.0274996
CJ785081 whatl10a09 3' Root 751bp       hypothetical protein OsJ_022482 [Oryza sativa (japonica cultivar-group)] 546 4.11137e-54
CJ785082 whatl10a10 3' Root 602bp       Histone H2B.2 447 7.61217e-43
CJ785083 whatl10a11 3' Root 546bp       Os01g0918300 [Oryza sativa (japonica cultivar-group)] 460 1.85739e-44
CJ785084 whatl10a12 3' Root 751bp       unknown [Zea mays] 711 3.00246e-73
CJ785085 whatl10a13 3' Root 374bp       Os07g0498300 [Oryza sativa (japonica cultivar-group)] 390 1.71832e-36
CJ785086 whatl10a15 3' Root 710bp       growth regulating factor 1 [Oryza sativa (indica cultivar-group)] 433 4.59968e-41
CJ785087 whatl10a16 3' Root 447bp       ADP-ribosylation factor [Elaeis guineensis] 342 6.31687e-31
CJ785088 whatl10a17 3' Root 683bp       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.1892e-75
CJ785089 whatl10a21 3' Root 756bp       glyceraldehyde-3-phosphate dehydrogenase [Triticum aestivum] 1001 7.20038e-107
CJ785090 whatl10a22 3' Root 563bp       Histone H2B.3 (wcH2B-8) 428 1.01741e-40
CJ785091 whatl10a23 3' Root 742bp       RecName: Full=Splicing factor U2af large subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subunit B; AltName: Full=U2 auxiliary factor 65 kDa subunit B 727 4.08308e-75
CJ785092 whatl10b02 3' Root 705bp       60S ribosomal protein L24 563 3.89391e-56
CJ785093 whatl10b03 3' Root 748bp       hypothetical protein OsI_022953 [Oryza sativa (indica cultivar-group)] 825 1.8131e-86
CJ785094 whatl10b04 3' Root 755bp       Os12g0273700 [Oryza sativa (japonica cultivar-group)] 291 7.32326e-29
CJ785095 whatl10b05 3' Root 544bp       acidic ribosomal protein P2 [Triticum aestivum] 312 2.5983e-27
CJ785096 whatl10b07 3' Root 588bp       hypothetical protein OsJ_029688 [Oryza sativa (japonica cultivar-group)] 489 9.73865e-48
CJ785097 whatl10b08 3' Root 744bp       beclin1-like protein [Triticum aestivum] 917 3.82815e-97
CJ785098 whatl10b10 3' Root 797bp       hypothetical protein OsI_003870 [Oryza sativa (indica cultivar-group)] 342 2.06735e-30
CJ785099 whatl10b12 3' Root 485bp       putative RNA-binding protein [Avena sativa] 127 5.24746e-06
CJ785100 whatl10b14 3' Root 813bp       hypothetical protein OsJ_004776 [Oryza sativa (japonica cultivar-group)] 1032 2.11108e-110
CJ785101 whatl10b15 3' Root 762bp       mitochondrial 2-oxoglutarate/malate translocator [Saccharum officinarum] 837 7.61063e-88
CJ785102 whatl10b16 3' Root 766bp       mitochondrial 2-oxoglutarate/malate translocator [Saccharum officinarum] 837 7.63725e-88
CJ785103 whatl10b18 3' Root 767bp       unknown [Zea mays] 804 5.12278e-84
CJ785104 whatl10b19 3' Root 515bp       unknown [Zea mays] 250 3.43825e-20
CJ785105 whatl10b20 3' Root 716bp       Elongation factor 1-alpha (EF-1-alpha) 859 3.43694e-99
CJ785106 whatl10b21 3' Root 643bp       Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 5.38929e-64
CJ785107 whatl10b22 3' Root 738bp       Elongation factor 1-alpha (EF-1-alpha) 837 7.17396e-88
CJ785108 whatl10b23 3' Root 741bp       hypothetical protein OsJ_004520 [Oryza sativa (japonica cultivar-group)] 326 1.29824e-28
CJ785109 whatl10b24 3' Root 743bp       hypothetical protein OsI_036833 [Oryza sativa (indica cultivar-group)] 550 1.37743e-54
CJ785110 whatl10c01 3' Root 713bp       Os01g0750000 [Oryza sativa (japonica cultivar-group)] 886 1.3756e-93
CJ785111 whatl10c02 3' Root 756bp       hypothetical protein OsI_018184 [Oryza sativa (indica cultivar-group)] 772 2.60032e-80
CJ785112 whatl10c03 3' Root 698bp       Os08g0420700 [Oryza sativa (japonica cultivar-group)] 425 3.80024e-40
CJ785113 whatl10c04 3' Root 747bp       Os06g0114700 [Oryza sativa (japonica cultivar-group)] 646 1.02556e-65
CJ785114 whatl10c05 3' Root 701bp       Os06g0342200 [Oryza sativa (japonica cultivar-group)] 568 1.0052e-56
CJ785115 whatl10c06 3' Root 543bp       retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] 627 7.73307e-64
CJ785116 whatl10c07 3' Root 499bp       unknown [Zea mays] 339 1.50888e-30
CJ785117 whatl10c08 3' Root 702bp       unknown [Zea mays] 206 9.51808e-15
CJ785118 whatl10c09 3' Root 812bp       Os12g0601200 [Oryza sativa (japonica cultivar-group)] 843 1.72652e-88
CJ785119 whatl10c10 3' Root 713bp       protease inhibitor-like protein [Triticum aestivum] 488 1.94639e-47
CJ785120 whatl10c11 3' Root 654bp       Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In Complex With Signal Recognition Particle (Srp) And Ribosome Nascent Chain Complex 517 7.07447e-51
CJ785121 whatl10c12 3' Root 650bp       Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In Complex With Signal Recognition Particle (Srp) And Ribosome Nascent Chain Complex 510 4.53343e-50
CJ785122 whatl10c14 3' Root 528bp       unknown [Zea mays] 570 2.92705e-57
CJ785123 whatl10c15 3' Root 694bp       cytosolic starch phosphorylase [Triticum aestivum] 649 3.99253e-66
CJ785124 whatl10c16 3' Root 767bp       alpha tubulin-2A [Triticum aestivum] 980 2.0005e-104
CJ785125 whatl10c17 3' Root 671bp       unknown [Zea mays] 565 2.02193e-56
CJ785126 whatl10c19 3' Root 616bp       hypothetical protein AaeL_AAEL003348 [Aedes aegypti] 82 1.71726
CJ785127 whatl10c20 3' Root 805bp       protein kinase 1 [Aegilops tauschii] 975 7.29987e-105
CJ785128 whatl10c21 3' Root 744bp       hypothetical protein OsJ_028841 [Oryza sativa (japonica cultivar-group)] 748 1.51237e-77
CJ785129 whatl10c22 3' Root 751bp       Os03g0669100 [Oryza sativa (japonica cultivar-group)] 210 3.76195e-15
CJ785130 whatl10c23 3' Root 714bp       Tubulin beta chain (Beta-tubulin) 1053 5.9393e-113
CJ785131 whatl10c24 3' Root 747bp       unknown [Zea mays] 745 3.39826e-77
CJ785132 whatl10d01 3' Root 718bp       unknown [Zea mays] 683 4.85071e-70
CJ785133 whatl10d02 3' Root 402bp       unknown [Zea mays] 189 3.47665e-13
CJ785134 whatl10d03 3' Root 155bp       unknown [Zea mays] 258 3.47568e-21
CJ785135 whatl10d04 3' Root 774bp       unknown [Zea mays] 1021 3.60897e-109
CJ785136 whatl10d05 3' Root 639bp       nucleoside diphosphate kinase [Lolium perenne] 750 6.48032e-78
CJ785137 whatl10d06 3' Root 778bp       beta-glucosidase [Triticum aestivum] 575 1.8944e-57
CJ785138 whatl10d07 3' Root 686bp       unknown [Zea mays] 632 3.62589e-64
CJ785139 whatl10d08 3' Root 692bp       putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii] 370 8.88843e-34
CJ785140 whatl10d09 3' Root 159bp            
CJ785141 whatl10d10 3' Root 786bp       ribosomal protein [Bromus inermis] 968 5.16777e-103
CJ785142 whatl10d11 3' Root 506bp       beta-D-glucan exohydrolase, isoenzyme ExoII 639 2.58149e-65
CJ785143 whatl10d13 3' Root 728bp       Nitrate reductase [NADH] (NR) 667 3.57281e-68
CJ785144 whatl10d14 3' Root 136bp       unknown [Zea mays] 164 2.69944e-10
CJ785145 whatl10d15 3' Root 752bp       unknown [Zea mays] 607 3.47242e-61
CJ785146 whatl10d16 3' Root 664bp       hypothetical protein OsJ_019212 [Oryza sativa (japonica cultivar-group)] 611 9.16895e-62
CJ785147 whatl10d19 3' Root 753bp       unknown [Zea mays] 997 2.09499e-106
CJ785148 whatl10d21 3' Root 755bp       growth regulating factor 1 [Oryza sativa (indica cultivar-group)] 424 5.81205e-40
CJ785149 whatl10d22 3' Root 666bp       flavanone 3-dioxygenase [Triticum aestivum] 803 4.99629e-84
CJ785150 whatl10d23 3' Root 798bp       Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1024 1.70999e-109
CJ785151 whatl10d24 3' Root 773bp       ATP-binding cassette sub-family f member 2 [Oryza sativa (indica cultivar-group)] 1032 1.89845e-110
CJ785152 whatl10e01 3' Root 755bp       Os05g0501300 [Oryza sativa (japonica cultivar-group)] 885 2.03387e-93
CJ785153 whatl10e02 3' Root 702bp       Os05g0402300 [Oryza sativa (japonica cultivar-group)] 626 1.90969e-63
CJ785154 whatl10e03 3' Root 773bp       Os01g0347500 [Oryza sativa (japonica cultivar-group)] 858 2.85005e-90
CJ785155 whatl10e05 3' Root 787bp       hypothetical protein OsJ_016448 [Oryza sativa (japonica cultivar-group)] 951 4.87438e-101
CJ785156 whatl10e06 3' Root 741bp       predicted protein [Botryotinia fuckeliana B05.10] 81 3.33218
CJ785157 whatl10e07 3' Root 768bp       Os07g0110300 [Oryza sativa (japonica cultivar-group)] 790 2.16978e-82
CJ785158 whatl10e08 3' Root 573bp       hypothetical protein OsI_009416 [Oryza sativa (indica cultivar-group)] 306 1.52136e-26
CJ785159 whatl10e10 3' Root 290bp       PREDICTED: hypothetical protein [Danio rerio] 82 0.891586
CJ785160 whatl10e11 3' Root 635bp       RNA-binding protein [Triticum aestivum] 107 0.00229743
CJ785161 whatl10e12 3' Root 796bp       S-adenosylmethionine decarboxylase precursor [Triticum aestivum] 972 4.55406e-107
CJ785162 whatl10e15 3' Root 755bp       unknown [Zea mays] 542 1.20628e-53
CJ785163 whatl10e17 3' Root 651bp       unknown [Zea mays] 620 7.96523e-63
CJ785164 whatl10e18 3' Root 774bp       delta-24-sterol methyltransferase [Triticum aestivum] 607 3.65954e-61
CJ785165 whatl10e19 3' Root 741bp       hypothetical protein OsI_006148 [Oryza sativa (indica cultivar-group)] 116 0.000288726
CJ785166 whatl10e20 3' Root 749bp       14-3-3-like protein B (14-3-3B) 956 1.16978e-101
CJ785167 whatl10e21 3' Root 725bp       glutathione-S-transferase Cla47 [Triticum aestivum] 1021 3.16544e-109
CJ785168 whatl10e23 3' Root 366bp       Os11g0634500 [Oryza sativa (japonica cultivar-group)] 321 1.68473e-28
CJ785169 whatl10e24 3' Root 355bp       40S ribosomal protein S29 299 6.08514e-26
CJ785170 whatl10f01 3' Root 736bp       unknown [Zea mays] 653 1.54165e-66
CJ785171 whatl10f03 3' Root 759bp       ribosomal protein L15 [Homo sapiens] 856 4.72792e-90
CJ785172 whatl10f04 3' Root 729bp       Os05g0113900 [Oryza sativa (japonica cultivar-group)] 369 1.28258e-33
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