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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 10375
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxb_10015_a01f 2012 5' Root 226bp Contig8149       RecName:Full=60SribosomalproteinL30 57 2.10572e-06
whxb_11015_a01f 2012 5' Root 490bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 316 2.49658e-84
whxb_12015_a01f 2012 5' Root 459bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 133 2.94715e-29
whxb_14015_a01f 2012 5' Root 563bp Contig5320       Chain6,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 248 8.64683e-64
whxb_15015_a01f 2012 5' Root 539bp Contig31935       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit10-B-like[Brachypodiumdistachyon] 227 1.385e-57
whxb_16015_a01f 2012 5' Root 449bp Contig4381       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.13466e-28
whxb_17015_a01f 2012 5' Root 478bp Contig28712       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 2.65936e-38
whxb_18015_a01f 2012 5' Root 538bp Contig818       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 1.28435e-87
whxb_20015_a01f 2012 5' Root 455bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.17497e-56
whxb_2015_a01f 2012 5' Root 679bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 3.61915e-96
whxb_21015_a01f 2012 5' Root 610bp Contig5412       dehydroascorbatereductase[Triticumaestivum] 406 2.36065e-111
whxb_22015_a01f 2012 5' Root 629bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 391 8.54184e-107
whxb_24015_a01f 2012 5' Root 433bp Contig2244       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 72 6.19143e-11
whxb_25015_a01f 2012 5' Root 433bp Contig2244       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 72 6.19143e-11
whxb_26015_a01f 2012 5' Root 646bp       putativeelongationfactor1-alpha[Miscanthussinensis] 322 5.17288e-86
whxb_27015_a01f 2012 5' Root 443bp       YALI0E26257p[Yarrowialipolytica] 40 0.265691
whxb_28015_a01f 2012 5' Root 331bp Contig8666       PREDICTED:uncharacterizedproteinLOC100835943[Brachypodiumdistachyon] 60 2.44063e-07
whxb_29015_a01f 2012 5' Root 629bp Contig8940       pathogenesis-relatedprotein1-10[Triticumaestivum] 361 7.24789e-98
whxb_30015_a01f 2012 5' Root 440bp Contig13422       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 158 6.51317e-37
whxb_32015_a01f 2012 5' Root 548bp Contig8667       WRKYtranscriptionfactor[Triticumaestivum] 162 1.98229e-43
whxb_33015_a01f 2012 5' Root 631bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 1.72112e-107
whxb_34015_a01f 2012 5' Root 336bp Contig8668            
whxb_35015_a01f 2012 5' Root 580bp       hypotheticalproteinCHLREDRAFT_195287[Chlamydomonasreinhardtii] 37 3.2871
whxb_4015_a01f 2012 5' Root 663bp Contig3446       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 306 5.32348e-81
whxb_5015_a01f 2012 5' Root 70bp Contig9013            
whxb_6015_a01f 2012 5' Root 596bp       hypotheticalproteinSORBIDRAFT_08g003720[Sorghumbicolor] 317 1.36506e-84
whxb_7015_a01f 2012 5' Root 328bp       Os12g0159600[OryzasativaJaponicaGroup] 138 9.27964e-31
whxb_8015_a01f 2012 5' Root 553bp       calreticulin-likeprotein[Triticumaestivum] 400 9.66586e-110
whxb_9015_a01f 2012 5' Root 520bp Contig8149       RecName:Full=60SribosomalproteinL30 224 7.8922e-57
whxb_10015_a02f 2012 5' Root 502bp       pollenallergenhomolog[Triticumaestivum] 334 8.65751e-90
whxb_11015_a02f 2012 5' Root 576bp Contig20815       mitochondrialprocessingpeptidasealpha-chainprecursor[Dactylisglomerata] 333 2.80156e-89
whxb_12015_a02f 2012 5' Root 519bp       hypotheticalproteinMYCGRDRAFT_117725[MycosphaerellagraminicolaIPO323] 42 0.0423331
whxb_14015_a02f 2012 5' Root 554bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 361 5.07333e-98
whxb_15015_a02f 2012 5' Root 433bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.01818e-21
whxb_16015_a02f 2012 5' Root 103bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 56 2.66533e-06
whxb_17015_a02f 2012 5' Root 516bp Contig36858       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 2.61512e-68
whxb_18015_a02f 2012 5' Root 31bp            
whxb_19015_a02f 2012 5' Root 468bp Contig36558       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 4.71282e-83
whxb_20015_a02f 2012 5' Root 540bp Contig8706       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.24688e-74
whxb_2015_a02f 2012 5' Root 637bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 1.48526e-114
whxb_21015_a02f 2012 5' Root 528bp Contig9302       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.26055e-44
whxb_22015_a02f 2012 5' Root 648bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 5.26189e-70
whxb_23015_a02f 2012 5' Root 505bp Contig9302       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.13636e-44
whxb_24015_a02f 2012 5' Root 263bp            
whxb_25015_a02f 2012 5' Root 396bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 145 4.50281e-33
whxb_26015_a02f 2012 5' Root 536bp Contig9094       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.93303e-44
whxb_28015_a02f 2012 5' Root 686bp       ATPsynthasebetasubunit[Triticumaestivum] 296 5.93393e-78
whxb_29015_a02f 2012 5' Root 209bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 136 2.67232e-30
whxb_30015_a02f 2012 5' Root 552bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 358 5.60922e-97
whxb_3015_a02f 2012 5' Root 636bp Contig29174       SGT1[Triticumaestivum] 414 9.62718e-114
whxb_31015_a02f 2012 5' Root 598bp Contig11535       PREDICTED:cellulosesynthase-likeproteinE2-like[Brachypodiumdistachyon] 334 1.40934e-89
whxb_32015_a02f 2012 5' Root 651bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 1.53913e-93
whxb_33015_a02f 2012 5' Root 627bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.06367e-109
whxb_4015_a02f 2012 5' Root 634bp Contig6671       RecName:Full=T-complexprotein1subunitepsilon;Short=TCP-1-epsilon;AltName:Full=CCT-epsilon;AltName:Full=TCP-K19 306 3.64447e-81
whxb_5015_a02f 2012 5' Root 219bp Contig6671            
whxb_6015_a02f 2012 5' Root 600bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 5.95593e-104
whxb_7015_a02f 2012 5' Root 503bp Contig8669       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 1.56043e-14
whxb_8015_a02f 2012 5' Root 531bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.75488e-54
whxb_10016_a03f 2012 5' Root 557bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 4.90763e-48
whxb_1016_a03f 2012 5' Root 687bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 3.27142e-05
whxb_11016_a03f 2012 5' Root 596bp       unnamedproteinproduct[ChimpanzeeadenovirusY25] 39 0.937112
whxb_12016_a03f 2012 5' Root 636bp       Os01g0220500[OryzasativaJaponicaGroup] 175 7.52675e-42
whxb_13016_a03f 2012 5' Root 582bp Contig8848       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 5.68241e-69
whxb_14016_a03f 2012 5' Root 364bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 87 1.42211e-15
whxb_15016_a03f 2012 5' Root 328bp       PREDICTED:transcriptionfactorbHLH135-like[Brachypodiumdistachyon] 66 3.41848e-09
whxb_16016_a03f 2012 5' Root 359bp Contig9803       predictedprotein[Hordeumvulgaresubsp.vulgare] 105 5.06599e-21
whxb_17016_a03f 2012 5' Root 245bp Contig8773       SJCHGC07612protein[Schistosomajaponicum] 35 6.40683
whxb_18016_a03f 2012 5' Root 621bp Contig945       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 1.90365e-79
whxb_19016_a03f 2012 5' Root 35bp            
whxb_2016_a03f 2012 5' Root 603bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.24766e-85
whxb_21016_a03f 2012 5' Root 90bp Contig36807       PREDICTED:ADP-ribosylationfactor-like[Strongylocentrotuspurpuratus] 58 7.09782e-07
whxb_22016_a03f 2012 5' Root 604bp Contig1167       predictedprotein[Hordeumvulgaresubsp.vulgare] 398 6.14915e-109
whxb_23016_a03f 2012 5' Root 389bp Contig8670       RNApolymeraseIItranscriptionfactorSIIIsubunitA2[Cricetulusgriseus] 36 2.87326
whxb_24016_a03f 2012 5' Root 403bp Contig8671            
whxb_25016_a03f 2012 5' Root 588bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 7.61567e-93
whxb_26016_a03f 2012 5' Root 476bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 1.65778e-72
whxb_28016_a03f 2012 5' Root 546bp Contig945       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 4.97018e-79
whxb_29016_a03f 2012 5' Root 609bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.46396e-97
whxb_30016_a03f 2012 5' Root 609bp Contig10404       glutaminesynthetaseisoformGSr2[Triticumaestivum] 352 5.20685e-95
whxb_31016_a03f 2012 5' Root 148bp Contig8331            
whxb_32016_a03f 2012 5' Root 550bp Contig23977       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 8.20164e-101
whxb_33016_a03f 2012 5' Root 365bp Contig23977       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 6.27072e-64
whxb_34016_a03f 2012 5' Root 643bp Contig5083       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.79712e-73
whxb_35016_a03f 2012 5' Root 483bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 2.03645e-22
whxb_4016_a03f 2012 5' Root 401bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 66 2.63669e-09
whxb_5016_a03f 2012 5' Root 613bp       PREDICTED:nucleolysinTIAR-like[Brachypodiumdistachyon] 299 4.12308e-79
whxb_6016_a03f 2012 5' Root 475bp Contig8449       predictedprotein[Hordeumvulgaresubsp.vulgare] 152 3.61044e-35
whxb_7016_a03f 2012 5' Root 495bp       PREDICTED:histoneH2B.3-likeisoform1[Brachypodiumdistachyon] 177 1.05149e-42
whxb_8016_a03f 2012 5' Root 610bp Contig968       5,10-methylene-tetrahydrofolatedehydrogenase/5,10-methenyl-tetrahydrofolatecyclohydrolase[Triticummonococcum] 359 3.26136e-97
whxb_9016_a03f 2012 5' Root 509bp Contig6168       PREDICTED:histoneH4-like[Glycinemax] 208 4.28811e-52
whxb_10016_a04f 2012 5' Root 530bp Contig1700       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 362 3.37754e-98
whxb_1016_a04f 2012 5' Root 565bp       cox1-i2geneproduct,partial(mitochondrion)[Gibberellamoniliformis] 37 1.77491
whxb_11016_a04f 2012 5' Root 630bp Contig6284       aquaporin7[Triticumaestivum] 234 1.33628e-59
whxb_13016_a04f 2012 5' Root 557bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 4.08765e-103
whxb_15016_a04f 2012 5' Root 500bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 5.27677e-87
whxb_16016_a04f 2012 5' Root 563bp Contig8677       PREDICTED:CBL-interactingproteinkinase32-like[Brachypodiumdistachyon] 131 1.54054e-28
whxb_17016_a04f 2012 5' Root 580bp Contig8675       PREDICTED:40SribosomalproteinS28-like[Brachypodiumdistachyon] 155 8.28186e-36
whxb_18016_a04f 2012 5' Root 350bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 106 3.00465e-21
whxb_19016_a04f 2012 5' Root 352bp Contig22873       40SribosomalproteinS9,partial[Triticumaestivum] 108 1.02871e-21
whxb_2016_a04f 2012 5' Root 406bp Contig8304       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.13377e-28
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