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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4824
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_1015_a01f 2012 5' Dormant seed with water absorption 94bp            
whem_11015_a01f 2012 5' Dormant seed with water absorption 387bp       PREDICTED:3-hydroxy-3-methylglutaryl-coenzymeAreductase3-like[Brachypodiumdistachyon] 241 5.90471e-62
whem_12015_a01f 2012 5' Dormant seed with water absorption 455bp Contig35837       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.11963e-44
whem_13015_a01f 2012 5' Dormant seed with water absorption 103bp Contig35837       PREDICTED:40SribosomalproteinS27-2-like[Brachypodiumdistachyon] 56 4.72822e-06
whem_14015_a01f 2012 5' Dormant seed with water absorption 324bp Contig21088       ChainM,LocalizationOfTheSmallSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 195 4.91607e-48
whem_17015_a01f 2012 5' Dormant seed with water absorption 96bp       PREDICTED:DNA-directedRNApolymeraseIsubunitRPA2[Brachypodiumdistachyon] 69 3.05155e-10
whem_18015_a01f 2012 5' Dormant seed with water absorption 131bp       PREDICTED:DNA-directedRNApolymeraseIsubunitRPA2[Brachypodiumdistachyon] 83 2.06057e-14
whem_20015_a01f 2012 5' Dormant seed with water absorption 442bp Contig31216       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.22819e-53
whem_3015_a01f 2012 5' Dormant seed with water absorption 211bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 63 2.19407e-08
whem_4015_a01f 2012 5' Dormant seed with water absorption 431bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 142 3.74605e-32
whem_9015_a01f 2012 5' Dormant seed with water absorption 372bp Contig19506       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 2.55007e-20
whem_10015_a02f 2012 5' Dormant seed with water absorption 302bp Contig26608       unknown[Lotusjaponicus] 35 6.44838
whem_1015_a02f 2012 5' Dormant seed with water absorption 248bp Contig6148       cyc07[Triticumaestivum] 139 3.13948e-31
whem_11015_a02f 2012 5' Dormant seed with water absorption 492bp       PREDICTED:luminal-bindingprotein3-like[Brachypodiumdistachyon] 322 3.46784e-86
whem_12015_a02f 2012 5' Dormant seed with water absorption 544bp Contig3876       PREDICTED:ubiquitin-60SribosomalproteinL40-2-like[Brachypodiumdistachyon] 241 9.41694e-62
whem_15015_a02f 2012 5' Dormant seed with water absorption 500bp Contig19994       heatshockprotein90[Triticumaestivum] 327 8.14089e-88
whem_17015_a02f 2012 5' Dormant seed with water absorption 388bp       conservedhypotheticalprotein[NeosporacaninumLiverpool] 47 0.00125136
whem_18015_a02f 2012 5' Dormant seed with water absorption 593bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 5.81658e-96
whem_20015_a02f 2012 5' Dormant seed with water absorption 576bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.6501e-68
whem_6015_a02f 2012 5' Dormant seed with water absorption 611bp Contig1215       putativeglycoprotein3-alpha-L-fucosyltransferase[Triticumaestivum] 331 1.72634e-100
whem_7015_a02f 2012 5' Dormant seed with water absorption 551bp Contig7933       fructose-bisphosphatealdolase[Triticumaestivum] 231 7.76604e-59
whem_9015_a02f 2012 5' Dormant seed with water absorption 323bp Contig19506       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 1.18101e-17
whem_10016_a03f 2012 5' Dormant seed with water absorption 484bp       PREDICTED:serinecarboxypeptidase-like3-like[Brachypodiumdistachyon] 288 5.60007e-76
whem_11016_a03f 2012 5' Dormant seed with water absorption 576bp Contig8973       putativeeukaryoticpeptidechainreleasefactorsubunit1-3[Triticumaestivum] 381 5.25906e-104
whem_12016_a03f 2012 5' Dormant seed with water absorption 466bp       glutamyl-tRNA(Gln)amidotransferasesubunitA[Plasmodiumchabaudichabaudi] 36 2.93921
whem_14016_a03f 2012 5' Dormant seed with water absorption 492bp Contig23446       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 1.50773e-81
whem_16016_a03f 2012 5' Dormant seed with water absorption 467bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 5.21063e-82
whem_18016_a03f 2012 5' Dormant seed with water absorption 410bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 7.20457e-68
whem_19016_a03f 2012 5' Dormant seed with water absorption 585bp Contig11598       hypotheticalproteinMELLADRAFT_94739[Melampsoralarici-populina98AG31] 116 1.15448e-33
whem_2016_a03f 2012 5' Dormant seed with water absorption 371bp Contig28120       putativeLPXTG-motifcellwallanchor[Micromonosporalupinistr.Lupac08] 40 0.266167
whem_4016_a03f 2012 5' Dormant seed with water absorption 534bp Contig6780       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 1.21244e-98
whem_5016_a03f 2012 5' Dormant seed with water absorption 87bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 38 0.995648
whem_7016_a03f 2012 5' Dormant seed with water absorption 299bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.24273e-51
whem_9016_a03f 2012 5' Dormant seed with water absorption 473bp Contig20391       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 8.59206e-53
whem_10016_a04f 2012 5' Dormant seed with water absorption 439bp Contig5450       pre-mRNAprocessingfactor[Triticumaestivum] 214 7.65817e-54
whem_12016_a04f 2012 5' Dormant seed with water absorption 384bp Contig12481       PREDICTED:carbamoyl-phosphatesynthasesmallchain-like[Brachypodiumdistachyon] 253 1.50759e-65
whem_14016_a04f 2012 5' Dormant seed with water absorption 505bp       translationinitiationfactor[Triticumaestivum] 232 4.7522e-59
whem_15016_a04f 2012 5' Dormant seed with water absorption 495bp Contig19582       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.18643e-86
whem_16016_a04f 2012 5' Dormant seed with water absorption 408bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 203 1.37068e-50
whem_18016_a04f 2012 5' Dormant seed with water absorption 556bp Contig4614       putativehighmobilitygroupprotein[Triticumaestivum] 217 1.18324e-54
whem_19016_a04f 2012 5' Dormant seed with water absorption 226bp            
whem_20016_a04f 2012 5' Dormant seed with water absorption 562bp Contig9458       PREDICTED:uncharacterizedproteinLOC100830908[Brachypodiumdistachyon] 318 6.68009e-85
whem_2016_a04f 2012 5' Dormant seed with water absorption 551bp       PREDICTED:probablehelicasesenataxin-like[Brachypodiumdistachyon] 61 1.81545e-07
whem_4016_a04f 2012 5' Dormant seed with water absorption 299bp Contig37051       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.50984e-44
whem_5016_a04f 2012 5' Dormant seed with water absorption 65bp Contig15965       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00106484
whem_6016_a04f 2012 5' Dormant seed with water absorption 359bp       dipeptide-bindingproteinDppE[Carnobacteriumsp.17-4] 36 3.77448
whem_8016_a04f 2012 5' Dormant seed with water absorption 123bp            
whem_9016_a04f 2012 5' Dormant seed with water absorption 482bp Contig21407       RecName:Full=ThioredoxinH-type;Short=Trx-H;AltName:Full=TrxTa 231 7.91577e-59
whem_10031_a05f 2012 5' Dormant seed with water absorption 165bp       putativehistoneacetyltransferaseGCN5[Hordeumvulgare] 86 2.45013e-15
whem_11031_a05f 2012 5' Dormant seed with water absorption 395bp Contig6148       hypotheticalproteinOsJ_13124[OryzasativaJaponicaGroup] 113 2.47651e-23
whem_14031_a05f 2012 5' Dormant seed with water absorption 308bp       PREDICTED:uncharacterizedproteinLOC100828496[Brachypodiumdistachyon] 57 2.05445e-06
whem_15031_a05f 2012 5' Dormant seed with water absorption 239bp Contig22386       riboflavinbiosynthesisproteinRibDdomain-containingprotein[Streptomycessp.AA4] 36 4.93927
whem_16031_a05f 2012 5' Dormant seed with water absorption 475bp Contig929       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 310 1.35301e-82
whem_17031_a05f 2012 5' Dormant seed with water absorption 210bp Contig13133       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 1.08999e-15
whem_18031_a05f 2012 5' Dormant seed with water absorption 526bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 331 4.77985e-89
whem_19031_a05f 2012 5' Dormant seed with water absorption 534bp Contig2853       GF13768[Drosophilaananassae] 44 0.0122013
whem_20031_a05f 2012 5' Dormant seed with water absorption 572bp Contig9916       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 3.85972e-75
whem_2031_a05f 2012 5' Dormant seed with water absorption 90bp       glutathionetransferase[Triticumaestivum] 59 3.18607e-07
whem_3031_a05f 2012 5' Dormant seed with water absorption 435bp Contig21063       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.03668e-74
whem_4031_a05f 2012 5' Dormant seed with water absorption 478bp Contig20515       ribosomalproteinL11[Triticumaestivum] 311 6.07337e-83
whem_5031_a05f 2012 5' Dormant seed with water absorption 270bp Contig20515       ribosomalproteinL11[Triticumaestivum] 157 1.46879e-36
whem_8031_a05f 2012 5' Dormant seed with water absorption 459bp Contig35837       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.11473e-44
whem_9031_a05f 2012 5' Dormant seed with water absorption 537bp Contig11876       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.14015e-95
whem_1031_a06f 2012 5' Dormant seed with water absorption 399bp       sucrosesynthase[Hordeumvulgaresubsp.vulgare] 242 1.61543e-62
whem_11031_a06f 2012 5' Dormant seed with water absorption 488bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 2.2633e-77
whem_12031_a06f 2012 5' Dormant seed with water absorption 405bp Contig8685       alpha-tubulin[Alopecurusaequalis] 163 1.57838e-38
whem_14031_a06f 2012 5' Dormant seed with water absorption 370bp Contig15677       PREDICTED:ubiquitin-conjugatingenzymeE2variant1C-like[Brachypodiumdistachyon] 173 2.01447e-41
whem_15031_a06f 2012 5' Dormant seed with water absorption 530bp       PREDICTED:ELMOdomain-containingproteinA-like[Brachypodiumdistachyon] 226 2.89261e-57
whem_16031_a06f 2012 5' Dormant seed with water absorption 587bp Contig23469       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.54583e-82
whem_17031_a06f 2012 5' Dormant seed with water absorption 537bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 365 4.16709e-99
whem_18031_a06f 2012 5' Dormant seed with water absorption 603bp Contig10295       predictedprotein[Hordeumvulgaresubsp.vulgare] 384 1.20008e-104
whem_2031_a06f 2012 5' Dormant seed with water absorption 396bp Contig1724       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 2.54059e-36
whem_3031_a06f 2012 5' Dormant seed with water absorption 325bp Contig8296       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 90 2.21898e-16
whem_4031_a06f 2012 5' Dormant seed with water absorption 546bp Contig8854       PREDICTED:eukaryoticinitiationfactor4A-like[Brachypodiumdistachyon] 326 1.73905e-87
whem_7031_a06f 2012 5' Dormant seed with water absorption 462bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 204 7.93523e-51
whem_10032_a07f 2012 5' Dormant seed with water absorption 316bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 4.63648e-51
whem_1032_a07f 2012 5' Dormant seed with water absorption 240bp       guanylylcyclase[Triticumaestivum] 173 1.51253e-41
whem_13032_a07f 2012 5' Dormant seed with water absorption 615bp Contig26756       hypotheticalproteinOsJ_03983[OryzasativaJaponicaGroup] 294 1.73227e-77
whem_15032_a07f 2012 5' Dormant seed with water absorption 526bp Contig10166       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 1.5875e-92
whem_17032_a07f 2012 5' Dormant seed with water absorption 99bp Contig1110            
whem_18032_a07f 2012 5' Dormant seed with water absorption 176bp Contig938       hypotheticalproteinSORBIDRAFT_01g024221[Sorghumbicolor] 76 3.26951e-12
whem_19032_a07f 2012 5' Dormant seed with water absorption 531bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 189 3.91855e-46
whem_20032_a07f 2012 5' Dormant seed with water absorption 323bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 208 5.61168e-52
whem_2032_a07f 2012 5' Dormant seed with water absorption 405bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.12591e-52
whem_5032_a07f 2012 5' Dormant seed with water absorption 53bp Contig4599       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 5.78208
whem_7032_a07f 2012 5' Dormant seed with water absorption 373bp       plusagglutinin[Chlamydomonasreinhardtii] 44 2.78387e-05
whem_8032_a07f 2012 5' Dormant seed with water absorption 164bp Contig20515            
whem_9032_a07f 2012 5' Dormant seed with water absorption 420bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.95654e-28
whem_10032_a08f 2012 5' Dormant seed with water absorption 576bp Contig5450       pre-mRNAprocessingfactor[Triticumaestivum] 214 1.13112e-53
whem_1032_a08f 2012 5' Dormant seed with water absorption 490bp Contig21       homeobox-likeresistance[Triticumaestivum] 227 8.94155e-58
whem_11032_a08f 2012 5' Dormant seed with water absorption 573bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 2.56504e-103
whem_12032_a08f 2012 5' Dormant seed with water absorption 230bp Contig5800       hypotheticalproteinSORBIDRAFT_01g024221[Sorghumbicolor] 88 6.48681e-16
whem_14032_a08f 2012 5' Dormant seed with water absorption 585bp Contig6317       PREDICTED:uncharacterizedproteinLOC100833126[Brachypodiumdistachyon] 324 1.39112e-86
whem_15032_a08f 2012 5' Dormant seed with water absorption 583bp Contig7431       Chain4,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 287 1.39638e-75
whem_16032_a08f 2012 5' Dormant seed with water absorption 588bp Contig7461       methioninesynthase1enzyme[Hordeumvulgaresubsp.vulgare] 362 4.60957e-98
whem_19032_a08f 2012 5' Dormant seed with water absorption 537bp Contig9208       PREDICTED:40SribosomalproteinS20-like[Brachypodiumdistachyon] 244 1.40014e-62
whem_20032_a08f 2012 5' Dormant seed with water absorption 544bp Contig7625       UDP-D-glucuronatedecarboxylase[Hordeumvulgare] 321 5.50845e-86
whem_2032_a08f 2012 5' Dormant seed with water absorption 499bp Contig4956       PREDICTED:nucleolarGTP-bindingprotein1-like[Brachypodiumdistachyon] 288 4.19075e-76
whem_5032_a08f 2012 5' Dormant seed with water absorption 175bp            
whem_7032_a08f 2012 5' Dormant seed with water absorption 524bp       hypotheticalproteinVOLCADRAFT_90892[Volvoxcarterif.nagariensis] 47 0.00229814
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