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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 8351
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whva_10001_a01f 2012 5' Shoot with ABA treatment 560bp Contig2045       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 5.81147e-105
whva_1001_a01f 2012 5' Shoot with ABA treatment 606bp Contig6997       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 6.04618e-104
whva_14015_a01f 2012 5' Shoot with ABA treatment 86bp Contig6825       rubiscoactivase(chloroplast)[Ammopiptanthusmongolicus] 61 1.43438e-07
whva_16015_a01f 2012 5' Shoot with ABA treatment 721bp Contig71       heatshockprotein90[Triticumaestivum] 475 6.02924e-132
whva_17015_a01f 2012 5' Shoot with ABA treatment 446bp Contig20428       RecName:Full=Phosphoglyceratekinase,chloroplastic;Flags:Precursor 184 1.1343e-44
whva_4001_a01f 2012 5' Shoot with ABA treatment 608bp       PREDICTED:serine/threonine-proteinkinaseB-raf-like[Brachypodiumdistachyon] 83 3.45417e-14
whva_7001_a01f 2012 5' Shoot with ABA treatment 619bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 4.36707e-60
whva_8001_a01f 2012 5' Shoot with ABA treatment 569bp Contig20290       sedoheptulose-1,7-bisphosphatase,chloroplastprecursor,expressed[Triticumaestivum] 260 1.30632e-67
whva_9001_a01f 2012 5' Shoot with ABA treatment 575bp Contig86       PREDICTED:probablehistoneH2Avariant3-likeisoform1[Brachypodiumdistachyon] 265 7.17408e-69
whva_10001_a01r 2012 3' Shoot with ABA treatment 463bp Contig7120       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 2.54519e-36
whva_1001_a01r 2012 3' Shoot with ABA treatment 456bp Contig13159       predictedprotein[Hordeumvulgaresubsp.vulgare] 57 2.05522e-06
whva_14015_a01r 2012 3' Shoot with ABA treatment 391bp Contig7344       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 199 2.56284e-49
whva_16015_a01r 2012 3' Shoot with ABA treatment 413bp Contig17298       heatshockprotein90[Triticumaestivum] 155 5.54474e-36
whva_4001_a01r 2012 3' Shoot with ABA treatment 401bp Contig13895       PREDICTED:serine/threonine-proteinkinaseB-raf-like[Brachypodiumdistachyon] 178 6.2178e-43
whva_8001_a01r 2012 3' Shoot with ABA treatment 315bp Contig20290       sedoheptulose-1,7-bisphosphatase,chloroplastprecursor,expressed[Triticumaestivum] 100 2.16838e-19
whva_9001_a01r 2012 3' Shoot with ABA treatment 403bp Contig86       unknown[Medicagotruncatula] 156 3.29112e-36
whva_10017_a02f 2012 5' Shoot with ABA treatment 436bp Contig6438       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.14619e-73
whva_13015_a02f 2012 5' Shoot with ABA treatment 232bp Contig13366            
whva_15015_a02f 2012 5' Shoot with ABA treatment 750bp Contig5534       vacuolarproton-ATPaseDsubunit[Triticumaestivum] 426 4.64717e-117
whva_17015_a02f 2012 5' Shoot with ABA treatment 136bp            
whva_18015_a02f 2012 5' Shoot with ABA treatment 583bp Contig9097       cyclophilinA-1[Triticumaestivum] 352 3.59347e-95
whva_20015_a02f 2012 5' Shoot with ABA treatment 599bp Contig6998       uncharacterizedproteinLOC100383840[Zeamays] 60 3.90933e-07
whva_2017_a02f 2012 5' Shoot with ABA treatment 537bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 365 3.25851e-99
whva_4017_a02f 2012 5' Shoot with ABA treatment 480bp       polyketidesynthase[StreptomycesalbusJ1074] 40 0.19906
whva_7017_a02f 2012 5' Shoot with ABA treatment 535bp Contig6999       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 3.5336e-18
whva_8017_a02f 2012 5' Shoot with ABA treatment 581bp Contig7000       methioninesynthase1enzyme[Hordeumvulgaresubsp.vulgare] 340 1.38992e-91
whva_10017_a02r 2012 3' Shoot with ABA treatment 507bp Contig6438       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 9.21017e-79
whva_1017_a02r 2012 3' Shoot with ABA treatment 37bp            
whva_13015_a02r 2012 3' Shoot with ABA treatment 622bp Contig13366       PREDICTED:multipleepidermalgrowthfactor-likedomainsprotein8-like[Xenopus(Silurana)tropicalis] 39 1.03309
whva_15015_a02r 2012 3' Shoot with ABA treatment 709bp Contig17508       vacuolarproton-ATPaseDsubunit[Triticumaestivum] 306 6.17046e-81
whva_17015_a02r 2012 3' Shoot with ABA treatment 167bp Contig7337       PREDICTED:peroxisomal(S)-2-hydroxy-acidoxidaseGLO5-like[Brachypodiumdistachyon] 102 5.61754e-20
whva_18015_a02r 2012 3' Shoot with ABA treatment 715bp Contig9097       cyclophilinA-1[Triticumaestivum] 347 2.45211e-93
whva_20015_a02r 2012 3' Shoot with ABA treatment 791bp       PREDICTED:rhoGTPase-activatingprotein42-like[Oreochromisniloticus] 39 1.03134
whva_2017_a02r 2012 3' Shoot with ABA treatment 539bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 205 4.7485e-70
whva_4017_a02r 2012 3' Shoot with ABA treatment 645bp       UDP-N-acetylglucosamin1-carboxyvinyltransferase[Streptomycesviridochromogenes] 39 0.661353
whva_7017_a02r 2012 3' Shoot with ABA treatment 514bp Contig6999       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.58643e-25
whva_8017_a02r 2012 3' Shoot with ABA treatment 520bp Contig2567       cobalamin-independentmethioninesynthase[Triticummonococcum] 200 1.58643e-49
whva_9017_a02r 2012 3' Shoot with ABA treatment 133bp            
whva_10033_a03f 2012 5' Shoot with ABA treatment 640bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 9.79755e-98
whva_1033_a03f 2012 5' Shoot with ABA treatment 344bp       sucrosesynthase[Hordeumvulgaresubsp.vulgare] 91 1.3164e-16
whva_11016_a03f 2012 5' Shoot with ABA treatment 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whva_14016_a03f 2012 5' Shoot with ABA treatment 605bp Contig6398       defenderagainstcelldeath2[Triticumaestivum] 225 7.24221e-57
whva_18016_a03f 2012 5' Shoot with ABA treatment 519bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 134 8.62092e-49
whva_2033_a03f 2012 5' Shoot with ABA treatment 526bp Contig2447       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 2.53449e-90
whva_3033_a03f 2012 5' Shoot with ABA treatment 467bp Contig18521       temperaturestress-inducedlipocalin[Triticumaestivum] 291 8.60871e-77
whva_4033_a03f 2012 5' Shoot with ABA treatment 490bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 7.99469e-83
whva_6033_a03f 2012 5' Shoot with ABA treatment 535bp Contig2671       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 345 4.46249e-93
whva_7033_a03f 2012 5' Shoot with ABA treatment 606bp       starchsynthaseI[Aegilopstauschii] 301 1.35635e-79
whva_9033_a03f 2012 5' Shoot with ABA treatment 541bp Contig7589       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 5.48296e-102
whva_10033_a03r 2012 3' Shoot with ABA treatment 494bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.26108e-52
whva_1033_a03r 2012 3' Shoot with ABA treatment 304bp       sucrosesynthase[Hordeumvulgaresubsp.vulgare] 92 4.42875e-17
whva_11016_a03r 2012 3' Shoot with ABA treatment 650bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 1.13014e-80
whva_13016_a03r 2012 3' Shoot with ABA treatment 422bp Contig35124       glycinedecarboxylasePsubunit[xTritordeumsp.] 175 5.28141e-42
whva_14016_a03r 2012 3' Shoot with ABA treatment 568bp Contig6398       defenderagainstcelldeath2[Triticumaestivum] 225 6.08217e-57
whva_16016_a03r 2012 3' Shoot with ABA treatment 106bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 8.61684e-08
whva_18016_a03r 2012 3' Shoot with ABA treatment 495bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 171 7.22886e-60
whva_2033_a03r 2012 3' Shoot with ABA treatment 547bp Contig7001       Na+/H+antiportersubunit[SymbiobacteriumthermophilumIAM14863] 36 6.13149
whva_3033_a03r 2012 3' Shoot with ABA treatment 436bp       temperaturestress-inducedlipocalin[Triticumaestivum] 231 6.07987e-59
whva_4033_a03r 2012 3' Shoot with ABA treatment 526bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 222 3.05601e-56
whva_6033_a03r 2012 3' Shoot with ABA treatment 595bp Contig2671       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 224 2.05405e-56
whva_7033_a03r 2012 3' Shoot with ABA treatment 477bp       putativesolublestarchsynthase[Triticumdurum] 164 1.19912e-38
whva_9033_a03r 2012 3' Shoot with ABA treatment 434bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 6.33326e-48
whva_10049_a04f 2012 5' Shoot with ABA treatment 501bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.53531e-86
whva_1049_a04f 2012 5' Shoot with ABA treatment 505bp       PREDICTED:peptidyl-prolylcis-transisomeraseCYP38,chloroplastic-like[Brachypodiumdistachyon] 277 1.28816e-72
whva_13016_a04f 2012 5' Shoot with ABA treatment 398bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 4.58729e-70
whva_15016_a04f 2012 5' Shoot with ABA treatment 674bp       putativehelicase[OryzasativaJaponicaGroup] 51 2.03106e-06
whva_16016_a04f 2012 5' Shoot with ABA treatment 710bp Contig4944       PREDICTED:uncharacterizedproteinLOC100825330[Brachypodiumdistachyon] 382 6.84338e-104
whva_18016_a04f 2012 5' Shoot with ABA treatment 40bp Contig2509       glycinedecarboxylasePsubunit[xTritordeumsp.] 35 3.3855
whva_19016_a04f 2012 5' Shoot with ABA treatment 597bp Contig12165       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 2.39807e-81
whva_20016_a04f 2012 5' Shoot with ABA treatment 622bp Contig7179       predictedprotein[Hordeumvulgaresubsp.vulgare] 315 5.79787e-84
whva_2049_a04f 2012 5' Shoot with ABA treatment 620bp       vacuolarproton-ATPasesubunitA[Triticumaestivum] 321 1.36109e-85
whva_3049_a04f 2012 5' Shoot with ABA treatment 372bp Contig5688       lipidtransferprotein[Triticumaestivum] 186 2.29045e-45
whva_4049_a04f 2012 5' Shoot with ABA treatment 603bp Contig14850       putativemembraneprotein[Triticumaestivum] 297 1.95857e-78
whva_6049_a04f 2012 5' Shoot with ABA treatment 515bp Contig7002       PREDICTED:probableglutathioneperoxidase4-like[Brachypodiumdistachyon] 314 5.66085e-84
whva_8049_a04f 2012 5' Shoot with ABA treatment 127bp            
whva_10049_a04r 2012 3' Shoot with ABA treatment 632bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 148 1.63702e-33
whva_1049_a04r 2012 3' Shoot with ABA treatment 579bp       PREDICTED:peptidyl-prolylcis-transisomeraseCYP38,chloroplastic-like[Brachypodiumdistachyon] 297 1.73297e-78
whva_13016_a04r 2012 3' Shoot with ABA treatment 601bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 295 5.52845e-78
whva_15016_a04r 2012 3' Shoot with ABA treatment 769bp       putativehelicase[OryzasativaJaponicaGroup] 51 2.67336e-06
whva_16016_a04r 2012 3' Shoot with ABA treatment 735bp Contig4944       PREDICTED:uncharacterizedproteinLOC100825330[Brachypodiumdistachyon] 386 2.95849e-105
whva_19016_a04r 2012 3' Shoot with ABA treatment 698bp Contig12165       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 2.96957e-80
whva_20016_a04r 2012 3' Shoot with ABA treatment 694bp Contig7179       predictedprotein[Hordeumvulgaresubsp.vulgare] 315 7.47292e-84
whva_2049_a04r 2012 3' Shoot with ABA treatment 177bp            
whva_4049_a04r 2012 3' Shoot with ABA treatment 534bp Contig14850       putativemembraneprotein[Triticumaestivum] 279 2.25353e-73
whva_5049_a04r 2012 3' Shoot with ABA treatment 480bp Contig16211       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 1.20207e-14
whva_6049_a04r 2012 3' Shoot with ABA treatment 625bp Contig7002       PREDICTED:probableglutathioneperoxidase4-like[Brachypodiumdistachyon] 258 8.41103e-67
whva_8049_a04r 2012 3' Shoot with ABA treatment 101bp            
whva_10065_a05f 2012 5' Shoot with ABA treatment 347bp Contig512       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.2896e-55
whva_1065_a05f 2012 5' Shoot with ABA treatment 587bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 375 6.87213e-102
whva_12031_a05f 2012 5' Shoot with ABA treatment 649bp Contig13629       RecName:Full=ThioredoxinM-type,chloroplastic;Short=Trx-M;Flags:Precursor 361 1.01744e-97
whva_15031_a05f 2012 5' Shoot with ABA treatment 656bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 438 6.71082e-121
whva_16031_a05f 2012 5' Shoot with ABA treatment 752bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 384 2.23437e-137
whva_17031_a05f 2012 5' Shoot with ABA treatment 672bp Contig36814       PREDICTED:40SribosomalproteinS17-2-like[Brachypodiumdistachyon] 258 1.31156e-66
whva_18031_a05f 2012 5' Shoot with ABA treatment 583bp       phosphoethanolaminemethyltransferase[Triticumaestivum] 158 9.78307e-37
whva_20031_a05f 2012 5' Shoot with ABA treatment 558bp       unknown[Zeamays] 361 5.26846e-98
whva_4065_a05f 2012 5' Shoot with ABA treatment 674bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.13029e-97
whva_7065_a05f 2012 5' Shoot with ABA treatment 397bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 265 5.09247e-69
whva_8065_a05f 2012 5' Shoot with ABA treatment 270bp       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 178 4.73065e-43
whva_10065_a05r 2012 3' Shoot with ABA treatment 584bp Contig512       predictedprotein[Hordeumvulgaresubsp.vulgare] 204 1.2102e-50
whva_1065_a05r 2012 3' Shoot with ABA treatment 558bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 269 3.49266e-70
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