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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 9135
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_1611015_a01f 2012 5' Shoot grown under cold condition for 16days 388bp       PREDICTED:proteinFLUORESCENTINBLUELIGHT,chloroplastic-like[Brachypodiumdistachyon] 246 2.39728e-63
whv_1612015_a01f 2012 5' Shoot grown under cold condition for 16days 690bp       PREDICTED:5-methyltetrahydropteroyltriglutamate--homocysteinemethyltransferase-like[Brachypodiumdistachyon] 269 7.85239e-70
whv_1614015_a01f 2012 5' Shoot grown under cold condition for 16days 719bp Contig36272       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 8.80775e-91
whv_1616015_a01f 2012 5' Shoot grown under cold condition for 16days 368bp Contig32559       photosystemIIpolypeptide[Triticumaestivum] 140 1.83428e-31
whv_1617015_a01f 2012 5' Shoot grown under cold condition for 16days 581bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.96665e-45
whv_1619015_a01f 2012 5' Shoot grown under cold condition for 16days 657bp       OSIGBa0096P03.8[OryzasativaIndicaGroup] 282 4.76929e-74
whv_1620015_a01f 2012 5' Shoot grown under cold condition for 16days 524bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.23498e-73
whv_165015_a01f 2012 5' Shoot grown under cold condition for 16days 122bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 6.46445e-16
whv_166015_a01f 2012 5' Shoot grown under cold condition for 16days 650bp Contig13848       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 1.56242e-114
whv_168015_a01f 2012 5' Shoot grown under cold condition for 16days 605bp Contig33519       chlorophylla/b-bindingproteinWCABprecursor[Triticumaestivum] 411 7.12558e-113
whv_1611015_a01r 2012 3' Shoot grown under cold condition for 16days 284bp       PREDICTED:proteinFLUORESCENTINBLUELIGHT,chloroplastic-like[Brachypodiumdistachyon] 69 3.04038e-10
whv_1612015_a01r 2012 3' Shoot grown under cold condition for 16days 529bp Contig2567       cobalamin-independentmethioninesynthase[Triticummonococcum] 229 4.46265e-58
whv_1614015_a01r 2012 3' Shoot grown under cold condition for 16days 645bp Contig36272       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 6.97515e-91
whv_1616015_a01r 2012 3' Shoot grown under cold condition for 16days 196bp Contig32559       predictedprotein[Hordeumvulgaresubsp.vulgare] 137 1.21545e-30
whv_1617015_a01r 2012 3' Shoot grown under cold condition for 16days 558bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 2.12877e-51
whv_1619015_a01r 2012 3' Shoot grown under cold condition for 16days 553bp Contig618       OSIGBa0096P03.8[OryzasativaIndicaGroup] 143 2.12966e-32
whv_1620015_a01r 2012 3' Shoot grown under cold condition for 16days 738bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.30131e-92
whv_166015_a01r 2012 3' Shoot grown under cold condition for 16days 722bp Contig13848       predictedprotein[Hordeumvulgaresubsp.vulgare] 455 6.51995e-126
whv_168015_a01r 2012 3' Shoot grown under cold condition for 16days 669bp Contig19262       chlorophylla/b-bindingproteinWCABprecursor[Triticumaestivum] 434 1.32022e-119
whv_169015_a01r 2012 3' Shoot grown under cold condition for 16days 39bp            
whv_161015_a02f 2012 5' Shoot grown under cold condition for 16days 707bp       adenosinediphosphateglucosepyrophosphatase[Triticumaestivum] 416 4.23372e-114
whv_1612015_a02f 2012 5' Shoot grown under cold condition for 16days 695bp Contig15107       hypotheticalproteinOsI_03457[OryzasativaIndicaGroup] 406 4.2042e-111
whv_1614015_a02f 2012 5' Shoot grown under cold condition for 16days 155bp            
whv_1616015_a02f 2012 5' Shoot grown under cold condition for 16days 554bp Contig17083       hypotheticalproteinOsI_08713[OryzasativaIndicaGroup] 300 1.38802e-79
whv_1617015_a02f 2012 5' Shoot grown under cold condition for 16days 628bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Hordeumchilense] 441 7.19764e-122
whv_1620015_a02f 2012 5' Shoot grown under cold condition for 16days 508bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 183 2.51976e-44
whv_163015_a02f 2012 5' Shoot grown under cold condition for 16days 715bp Contig6416       PREDICTED:uncharacterizedproteinAt4g14100-like[Brachypodiumdistachyon] 361 1.64097e-97
whv_164015_a02f 2012 5' Shoot grown under cold condition for 16days 717bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 1.73899e-46
whv_166015_a02f 2012 5' Shoot grown under cold condition for 16days 65bp            
whv_161015_a02r 2012 3' Shoot grown under cold condition for 16days 499bp       adenosinediphosphateglucosepyrophosphatase[Triticumaestivum] 278 4.35683e-73
whv_1612015_a02r 2012 3' Shoot grown under cold condition for 16days 712bp Contig15107       hypotheticalproteinOsI_03457[OryzasativaIndicaGroup] 208 1.35428e-51
whv_1614015_a02r 2012 3' Shoot grown under cold condition for 16days 133bp            
whv_1616015_a02r 2012 3' Shoot grown under cold condition for 16days 626bp Contig17083       ATP/ADPcarrierprotein[Triticumturgidum] 248 8.82329e-64
whv_1617015_a02r 2012 3' Shoot grown under cold condition for 16days 727bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Crithopsisdelileana] 505 7.31461e-141
whv_1620015_a02r 2012 3' Shoot grown under cold condition for 16days 498bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 205 3.57245e-51
whv_163015_a02r 2012 3' Shoot grown under cold condition for 16days 567bp Contig6416       PREDICTED:uncharacterizedproteinAt4g14100-like[Brachypodiumdistachyon] 235 4.50018e-60
whv_166015_a02r 2012 3' Shoot grown under cold condition for 16days 680bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 358 9.5241e-97
whv_161016_a03f 2012 5' Shoot grown under cold condition for 16days 646bp Contig6923       dehydrin[Triticumaestivum] 241 1.49664e-61
whv_1613016_a03f 2012 5' Shoot grown under cold condition for 16days 674bp Contig6499       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 354 1.34471e-95
whv_1616016_a03f 2012 5' Shoot grown under cold condition for 16days 113bp            
whv_1617016_a03f 2012 5' Shoot grown under cold condition for 16days 144bp            
whv_1618016_a03f 2012 5' Shoot grown under cold condition for 16days 587bp       PREDICTED:DUF21domain-containingproteinAt2g14520-like[Brachypodiumdistachyon] 354 9.61153e-96
whv_1619016_a03f 2012 5' Shoot grown under cold condition for 16days 401bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.4202e-71
whv_162016_a03f 2012 5' Shoot grown under cold condition for 16days 674bp       salttolerantprotein[Triticumaestivum] 301 1.35097e-79
whv_166016_a03f 2012 5' Shoot grown under cold condition for 16days 174bp       probableUDP-sugartransporterproteinSLC35A4[Clonorchissinensis] 35 6.41616
whv_167016_a03f 2012 5' Shoot grown under cold condition for 16days 778bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whv_168016_a03f 2012 5' Shoot grown under cold condition for 16days 617bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 388 8.94043e-106
whv_169016_a03f 2012 5' Shoot grown under cold condition for 16days 57bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0293613
whv_161016_a03r 2012 3' Shoot grown under cold condition for 16days 595bp Contig6923       dehydrin[Triticumaestivum] 241 1.22413e-61
whv_1613016_a03r 2012 3' Shoot grown under cold condition for 16days 692bp Contig6499       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 358 7.61645e-97
whv_1616016_a03r 2012 3' Shoot grown under cold condition for 16days 66bp Contig2917       PREDICTED:probablepeptide/nitratetransporterAt3g43790-like[Brachypodiumdistachyon] 38 0.646019
whv_1617016_a03r 2012 3' Shoot grown under cold condition for 16days 152bp            
whv_1618016_a03r 2012 3' Shoot grown under cold condition for 16days 718bp       PREDICTED:DUF21domain-containingproteinAt2g14520-like[Brachypodiumdistachyon] 340 2.9975e-91
whv_1619016_a03r 2012 3' Shoot grown under cold condition for 16days 543bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 4.68443e-53
whv_162016_a03r 2012 3' Shoot grown under cold condition for 16days 517bp       salttolerantprotein[Triticumaestivum] 220 1.89763e-55
whv_166016_a03r 2012 3' Shoot grown under cold condition for 16days 117bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.7901e-13
whv_167016_a03r 2012 3' Shoot grown under cold condition for 16days 636bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.00724e-84
whv_168016_a03r 2012 3' Shoot grown under cold condition for 16days 710bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 347 2.43963e-93
whv_169016_a03r 2012 3' Shoot grown under cold condition for 16days 275bp       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 101 1.24477e-19
whv_1612016_a04f 2012 5' Shoot grown under cold condition for 16days 467bp Contig24198       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 1.87923e-31
whv_1617016_a04f 2012 5' Shoot grown under cold condition for 16days 145bp            
whv_1619016_a04f 2012 5' Shoot grown under cold condition for 16days 650bp       RecName:Full=GlutathioneS-transferase1;AltName:Full=GSTclass-phi 396 2.18523e-108
whv_162016_a04f 2012 5' Shoot grown under cold condition for 16days 452bp Contig9176       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.12452e-44
whv_163016_a04f 2012 5' Shoot grown under cold condition for 16days 599bp       dehydrin[Triticumdurum] 296 4.23299e-78
whv_164016_a04f 2012 5' Shoot grown under cold condition for 16days 401bp       PREDICTED:diseaseresistanceproteinRPM1-like[Brachypodiumdistachyon] 136 2.07469e-30
whv_166016_a04f 2012 5' Shoot grown under cold condition for 16days 714bp Contig6417       PREDICTED:3-hydroxybutyryl-CoAdehydratase-like[Brachypodiumdistachyon] 372 5.45008e-101
whv_167016_a04f 2012 5' Shoot grown under cold condition for 16days 593bp Contig6527       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 271 8.45776e-71
whv_168016_a04f 2012 5' Shoot grown under cold condition for 16days 685bp Contig5532       phosphoribulokinase[Triticumaestivum] 454 1.30367e-125
whv_169016_a04f 2012 5' Shoot grown under cold condition for 16days 472bp Contig24971       Os01g0630700[OryzasativaJaponicaGroup] 147 1.52369e-33
whv_1612016_a04r 2012 3' Shoot grown under cold condition for 16days 413bp Contig24198       predictedprotein[Hordeumvulgaresubsp.vulgare] 149 3.0425e-34
whv_1616016_a04r 2012 3' Shoot grown under cold condition for 16days 39bp            
whv_1617016_a04r 2012 3' Shoot grown under cold condition for 16days 67bp            
whv_1619016_a04r 2012 3' Shoot grown under cold condition for 16days 697bp       RecName:Full=GlutathioneS-transferase1;AltName:Full=GSTclass-phi 334 1.20284e-89
whv_162016_a04r 2012 3' Shoot grown under cold condition for 16days 426bp Contig9176       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.13221e-44
whv_163016_a04r 2012 3' Shoot grown under cold condition for 16days 492bp       dehydrin[Triticumdurum] 203 1.79763e-50
whv_164016_a04r 2012 3' Shoot grown under cold condition for 16days 502bp       PREDICTED:diseaseresistanceproteinRPM1-like[Brachypodiumdistachyon] 103 1.90307e-20
whv_166016_a04r 2012 3' Shoot grown under cold condition for 16days 706bp Contig6417       PREDICTED:3-hydroxybutyryl-CoAdehydratase-like[Brachypodiumdistachyon] 380 3.36237e-103
whv_167016_a04r 2012 3' Shoot grown under cold condition for 16days 570bp Contig6527       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 291 9.18676e-77
whv_168016_a04r 2012 3' Shoot grown under cold condition for 16days 744bp Contig7153       RecName:Full=Phosphoribulokinase,chloroplastic;Short=PRK;Short=PRKase;AltName:Full=Phosphopentokinase;Flags:Precursor 363 2.75725e-98
whv_169016_a04r 2012 3' Shoot grown under cold condition for 16days 678bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.40738e-92
whv_1610031_a05f 2012 5' Shoot grown under cold condition for 16days 36bp            
whv_1612031_a05f 2012 5' Shoot grown under cold condition for 16days 628bp Contig6137       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 2.74782e-105
whv_1613031_a05f 2012 5' Shoot grown under cold condition for 16days 83bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 57 2.07734e-06
whv_1618031_a05f 2012 5' Shoot grown under cold condition for 16days 566bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.21999e-89
whv_1619031_a05f 2012 5' Shoot grown under cold condition for 16days 666bp Contig11828       predictedprotein[Hordeumvulgaresubsp.vulgare] 425 4.66406e-117
whv_163031_a05f 2012 5' Shoot grown under cold condition for 16days 725bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 463 3.15724e-128
whv_164031_a05f 2012 5' Shoot grown under cold condition for 16days 772bp Contig29366       predictedprotein[Hordeumvulgaresubsp.vulgare] 504 1.82238e-140
whv_166031_a05f 2012 5' Shoot grown under cold condition for 16days 743bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.86978e-97
whv_167031_a05f 2012 5' Shoot grown under cold condition for 16days 719bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.26889e-97
whv_169031_a05f 2012 5' Shoot grown under cold condition for 16days 658bp Contig14137       PREDICTED:bidirectionalsugartransporterSWEET2b-like[Brachypodiumdistachyon] 403 3.16218e-110
whv_1610031_a05r 2012 3' Shoot grown under cold condition for 16days 508bp Contig32100       PREDICTED:cyclin-B1-2-like[Brachypodiumdistachyon] 271 7.06835e-71
whv_1612031_a05r 2012 3' Shoot grown under cold condition for 16days 703bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 4.5404e-68
whv_1613031_a05r 2012 3' Shoot grown under cold condition for 16days 161bp Contig10197       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.43761e-23
whv_1618031_a05r 2012 3' Shoot grown under cold condition for 16days 742bp Contig9874       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.82737e-95
whv_1619031_a05r 2012 3' Shoot grown under cold condition for 16days 757bp Contig11828       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 5.7577e-99
whv_163031_a05r 2012 3' Shoot grown under cold condition for 16days 742bp Contig6499       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 385 6.77562e-105
whv_164031_a05r 2012 3' Shoot grown under cold condition for 16days 696bp Contig5728       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 5.83593e-52
whv_166031_a05r 2012 3' Shoot grown under cold condition for 16days 669bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 6.6452e-87
whv_167031_a05r 2012 3' Shoot grown under cold condition for 16days 673bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.1026e-89
whv_169031_a05r 2012 3' Shoot grown under cold condition for 16days 734bp Contig14137       PREDICTED:bidirectionalsugartransporterSWEET2b-like[Brachypodiumdistachyon] 375 6.82044e-102
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