/wheat/komugi
Home
About
update information
Site map
Contact Us
Japanese
| English
ALL
Strain
Gene
GeneClass
Marker
cDNA
Reference
How to order
Search Strains
Search
Strains by category
Selected by phenotype
Selected by institutions
Collection sites map
Search by SSR polymorphism
Phenotype(spike) Images
Chromosome Images
Download
cDNA
How to order Resources
MTA Sample
Tables of Fees
Submit Reference
Deposition
FAQ
Wheat Taxonomy
Learn
For professionals
eWIS
Textpresso
mugi-net
For the public
Story of wheat (Japanese only)
Chromosomes images
Seiken Ziho
Genome / Dev.
Genes / Marker
Map
Composite wheat map
CMap
Comparative Map
DNA Sequence
DNA sequence
cDNA
TAC
Microarray
Organelles
Tools / Links
BLAST
Tools (SHIGEN)
Related Site(WGR)
Download
Strains
Microarray
Composite Wheat Map
cDNA
Genome
About us
About the KOMUGI
About NBRP Strains
KOMUGI DB Working
Genome / Development
cDNA
BLAST
Tissue specific clones
complex contig list (2012)
Query Form
--------------------------
How to use Virtual Display (2012)
--------------------------
Related Sites
Download
cDNA
List
TSV (Separated by TAB)
FASTA
*1
Contig derived from a single library
*2
Contig derived from multiple libraries
Hit Count :
8063
First Previous 1-100
101-200
201-300
301-400
401-500
501-600
601-700
701-800
Next
Last
All
Accession
Clone
Registered year
Dir.
Tissue
Sequence
Contig
*1
Contig
*2
Homology (BLAST)
Swiss-Prot
nr
Top hit
GO ID
Term
Top hit (Definition)
score
E-Value
whxa_10015_a01r
2012
3'
Root
615bp
Contig23977
glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum]
319
5.02845e-85
whxa_13015_a01r
2012
3'
Root
497bp
Contig9740
aquaporin[Hordeumvulgare]
196
2.17737e-48
whxa_14015_a01r
2012
3'
Root
724bp
Contig35437
glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum]
373
2.49488e-101
whxa_16015_a01r
2012
3'
Root
541bp
Contig2824
hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor]
235
6.78064e-60
whxa_17015_a01r
2012
3'
Root
663bp
hypotheticalproteinOsJ_00371[OryzasativaJaponicaGroup]
114
2.27321e-23
whxa_19015_a01r
2012
3'
Root
627bp
Contig686
PREDICTED:tubulinalphachain-like[Brachypodiumdistachyon]
368
9.97875e-100
whxa_20015_a01r
2012
3'
Root
615bp
Contig9977
PREDICTED:ATP-citratesynthasealphachainprotein2-like[Brachypodiumdistachyon]
294
1.01555e-77
whxa_2015_a01r
2012
3'
Root
606bp
Contig9138
aquaporinPIP1[Triticumaestivum]
241
1.27541e-61
whxa_21015_a01r
2012
3'
Root
598bp
hypotheticalproteinSORBIDRAFT_09g026180[Sorghumbicolor]
196
4.56471e-48
whxa_22015_a01r
2012
3'
Root
417bp
Contig17303
cytochromereductase,partial[Triticumaestivum]
183
1.89339e-44
whxa_23015_a01r
2012
3'
Root
552bp
Contig12935
predictedprotein[Hordeumvulgaresubsp.vulgare]
270
2.00895e-70
whxa_25015_a01r
2012
3'
Root
521bp
Contig8249
PREDICTED:DNA(cytosine-5)-methyltransferase1B-like[Brachypodiumdistachyon]
183
2.62101e-44
whxa_26015_a01r
2012
3'
Root
56bp
Contig8249
PREDICTED:DNA(cytosine-5)-methyltransferase1B-like[Brachypodiumdistachyon]
38
0.55373
whxa_27015_a01r
2012
3'
Root
575bp
Contig33529
predictedprotein[Hordeumvulgaresubsp.vulgare]
335
5.64495e-90
whxa_28015_a01r
2012
3'
Root
588bp
Contig28411
translationally-controlledtumorprotein[Triticumaestivum]
303
2.54111e-80
whxa_29015_a01r
2012
3'
Root
252bp
Contig2080
predictedprotein[Hordeumvulgaresubsp.vulgare]
44
0.0108495
whxa_3015_a01r
2012
3'
Root
147bp
aquaporin[Hordeumvulgare]
86
4.24544e-15
whxa_7015_a01r
2012
3'
Root
597bp
Contig10043
beta-glucosidase[Triticumaestivum]
217
2.5109e-54
whxa_8015_a01r
2012
3'
Root
292bp
Contig22089
predictedprotein[LeptosphaeriamaculansJN3]
49
0.000334031
whxa_10015_a02r
2012
3'
Root
607bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
237
1.43118e-60
whxa_1015_a02r
2012
3'
Root
597bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
305
5.34234e-81
whxa_11015_a02r
2012
3'
Root
685bp
Contig2410
predictedprotein[Hordeumvulgaresubsp.vulgare]
222
8.63945e-94
whxa_13015_a02r
2012
3'
Root
54bp
Contig9154
ChainM,LocalizationOfTheSmallSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome
40
0.145719
whxa_14015_a02r
2012
3'
Root
419bp
PREDICTED:uncharacterizedproteinLOC100830321[Brachypodiumdistachyon]
133
3.01851e-29
whxa_15015_a02r
2012
3'
Root
428bp
PREDICTED:uncharacterizedproteinLOC100830321[Brachypodiumdistachyon]
133
2.98076e-29
whxa_16015_a02r
2012
3'
Root
568bp
PREDICTED:uncharacterizedproteinLOC100841437isoform1[Brachypodiumdistachyon]
166
3.35292e-39
whxa_17015_a02r
2012
3'
Root
467bp
hypotheticalproteinpah_c004o004[Parachlamydiaacanthamoebaestr.Hall'scoccus]
35
8.51409
whxa_18015_a02r
2012
3'
Root
790bp
Contig23977
glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum]
427
2.29634e-117
whxa_19015_a02r
2012
3'
Root
191bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
53
2.32333e-05
whxa_20015_a02r
2012
3'
Root
576bp
Contig6540
Mitochondrialprotein,putative[Medicagotruncatula]
172
6.32868e-41
whxa_22015_a02r
2012
3'
Root
72bp
whxa_23015_a02r
2012
3'
Root
311bp
Contig34994
predictedprotein[Hordeumvulgaresubsp.vulgare]
83
3.48339e-14
whxa_24015_a02r
2012
3'
Root
386bp
Contig17815
S28ribosomalprotein,partial[Triticumaestivum]
165
5.37787e-39
whxa_27015_a02r
2012
3'
Root
581bp
Contig14643
predictedprotein[Hordeumvulgaresubsp.vulgare]
282
3.43942e-74
whxa_28015_a02r
2012
3'
Root
485bp
PREDICTED:probableproteinphosphatase2C34-like[Brachypodiumdistachyon]
66
4.52029e-09
whxa_29015_a02r
2012
3'
Root
329bp
Contig9913
unknown[Lotusjaponicus]
90
2.21066e-16
whxa_4015_a02r
2012
3'
Root
536bp
Contig9317
putativetransthyretin,havingalternativesplicingproducts[OryzasativaJaponicaGroup]
257
9.36982e-67
whxa_5015_a02r
2012
3'
Root
591bp
PREDICTED:putativemitochondrial2-oxoglutarate/malatecarrierprotein-like[Brachypodiumdistachyon]
193
2.88145e-47
whxa_6015_a02r
2012
3'
Root
615bp
Contig10713
predictedprotein[Hordeumvulgaresubsp.vulgare]
348
7.85038e-94
whxa_7015_a02r
2012
3'
Root
644bp
Contig9547
PREDICTED:60SribosomalproteinL5-1-like[Brachypodiumdistachyon]
309
3.4264e-82
whxa_8015_a02r
2012
3'
Root
596bp
Contig9320
ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome
312
5.73513e-83
whxa_9015_a02r
2012
3'
Root
590bp
Contig534
predictedprotein[Hordeumvulgaresubsp.vulgare]
303
2.5821e-80
whxa_10016_a03r
2012
3'
Root
584bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
300
1.62054e-79
whxa_1016_a03r
2012
3'
Root
599bp
Contig7971
PREDICTED:probableDNArepairproteinRAD23-likeisoform2[Brachypodiumdistachyon]
281
1.07894e-73
whxa_15016_a03r
2012
3'
Root
487bp
Contig8250
RecName:Full=Alanineaminotransferase2;Short=ALAAT-2;AltName:Full=Glutamatepyruvatetransaminase2;Short=GPT;AltName:Full=Glutamic--alaninetransaminase2;AltName:Full=Glutamic--pyruvictransaminase2
203
1.81406e-50
whxa_16016_a03r
2012
3'
Root
76bp
Contig5504
RecName:Full=Alanineaminotransferase2;Short=ALAAT-2;AltName:Full=Glutamatepyruvatetransaminase2;Short=GPT;AltName:Full=Glutamic--alaninetransaminase2;AltName:Full=Glutamic--pyruvictransaminase2
56
2.72901e-06
whxa_17016_a03r
2012
3'
Root
706bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
323
2.83076e-86
whxa_18016_a03r
2012
3'
Root
358bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
215
3.48945e-54
whxa_21016_a03r
2012
3'
Root
570bp
PREDICTED:coatomersubunitdelta-1-like[Brachypodiumdistachyon]
152
2.95095e-65
whxa_22016_a03r
2012
3'
Root
284bp
Contig3762
ribosomalproteinS28e[CoccomyxasubellipsoideaC-169]
102
4.23268e-20
whxa_23016_a03r
2012
3'
Root
247bp
Contig5247
whxa_24016_a03r
2012
3'
Root
194bp
Contig5247
whxa_26016_a03r
2012
3'
Root
382bp
Contig16215
PREDICTED:putativeclathrinassemblyproteinAt2g25430-like[Brachypodiumdistachyon]
195
4.89182e-48
whxa_27016_a03r
2012
3'
Root
295bp
Contig34778
betatubulin5[Hordeumvulgaresubsp.vulgare]
56
3.55593e-06
whxa_28016_a03r
2012
3'
Root
512bp
Contig26518
predictedprotein[Hordeumvulgaresubsp.vulgare]
182
4.27797e-44
whxa_29016_a03r
2012
3'
Root
313bp
Contig548
putativemembraneprotein[Streptococcusictaluri707-05]
36
4.86524
whxa_4016_a03r
2012
3'
Root
669bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
229
4.96259e-58
whxa_5016_a03r
2012
3'
Root
367bp
Contig9717
L2protein[Humanpapillomavirustype97]
36
2.86751
whxa_6016_a03r
2012
3'
Root
362bp
Contig9717
L2protein[Humanpapillomavirustype68b]
36
3.75979
whxa_7016_a03r
2012
3'
Root
527bp
Contig3148
predictedprotein[Hordeumvulgaresubsp.vulgare]
229
4.36348e-58
whxa_8016_a03r
2012
3'
Root
603bp
Contig22065
14-3-3protein[Triticumaestivum]
245
5.10081e-63
whxa_9016_a03r
2012
3'
Root
591bp
Contig22065
14-3-3protein[Triticumaestivum]
238
1.0201e-60
whxa_10016_a04r
2012
3'
Root
556bp
Contig32191
HistoneH3[Medicagotruncatula]
264
8.60271e-69
whxa_1016_a04r
2012
3'
Root
595bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
284
1.64681e-74
whxa_11016_a04r
2012
3'
Root
477bp
Contig5341
predictedprotein[Hordeumvulgaresubsp.vulgare]
155
5.57011e-36
whxa_12016_a04r
2012
3'
Root
487bp
Contig9540
PREDICTED:uncharacterizedproteinLOC100837236[Brachypodiumdistachyon]
160
1.34235e-37
whxa_13016_a04r
2012
3'
Root
31bp
whxa_14016_a04r
2012
3'
Root
521bp
PREDICTED:CTPsynthase-likeisoform2[Brachypodiumdistachyon]
72
6.51594e-11
whxa_15016_a04r
2012
3'
Root
640bp
VER2[Triticumaestivum]
178
8.89108e-43
whxa_16016_a04r
2012
3'
Root
738bp
pathogenesis-relatedprotein1-8[Triticumaestivum]
356
5.69696e-96
whxa_17016_a04r
2012
3'
Root
717bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
316
6.11372e-84
whxa_18016_a04r
2012
3'
Root
114bp
whxa_19016_a04r
2012
3'
Root
629bp
Contig403
predictedprotein[Hordeumvulgaresubsp.vulgare]
289
3.50027e-76
whxa_20016_a04r
2012
3'
Root
572bp
Contig11304
predictedprotein[Hordeumvulgaresubsp.vulgare]
246
2.59496e-63
whxa_23016_a04r
2012
3'
Root
423bp
Contig8410
predictedprotein[Hordeumvulgaresubsp.vulgare]
42
0.0697819
whxa_24016_a04r
2012
3'
Root
602bp
Contig10520
predictedprotein[Hordeumvulgaresubsp.vulgare]
280
1.86871e-73
whxa_25016_a04r
2012
3'
Root
603bp
Contig10520
predictedprotein[Hordeumvulgaresubsp.vulgare]
278
7.2087e-73
whxa_27016_a04r
2012
3'
Root
242bp
hypotheticalproteinOsJ_33997[OryzasativaJaponicaGroup]
51
8.66873e-05
whxa_28016_a04r
2012
3'
Root
353bp
Contig1752
predictedprotein[Hordeumvulgaresubsp.vulgare]
70
1.82006e-10
whxa_29016_a04r
2012
3'
Root
436bp
Contig22065
14-3-3protein[Triticumaestivum]
144
9.77445e-33
whxa_3016_a04r
2012
3'
Root
587bp
Contig327
predictedprotein[Hordeumvulgaresubsp.vulgare]
198
1.15129e-48
whxa_4016_a04r
2012
3'
Root
598bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
252
5.36718e-65
whxa_6016_a04r
2012
3'
Root
555bp
Contig9882
GTPaseSAR1[Triticumaestivum]
225
4.34492e-57
whxa_7016_a04r
2012
3'
Root
554bp
Contig9882
GTPaseSAR1[Triticumaestivum]
220
1.39771e-55
whxa_8016_a04r
2012
3'
Root
586bp
PREDICTED:uncharacterizedproteinLOC100824278[Brachypodiumdistachyon]
238
1.00391e-60
whxa_10031_a05r
2012
3'
Root
570bp
Contig8945
predictedprotein[Hordeumvulgaresubsp.vulgare]
263
2.63214e-68
whxa_12031_a05r
2012
3'
Root
609bp
GTPaseSAR1[Triticumaestivum]
312
3.50067e-83
whxa_13031_a05r
2012
3'
Root
633bp
conservedhypotheticalprotein,expressed[Triticumaestivum]
252
8.04945e-65
whxa_14031_a05r
2012
3'
Root
623bp
Contig15136
predictedprotein[Hordeumvulgaresubsp.vulgare]
343
3.39116e-92
whxa_15031_a05r
2012
3'
Root
639bp
Contig5555
PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon]
295
8.62297e-78
whxa_17031_a05r
2012
3'
Root
720bp
Contig8253
hypotheticalproteinSORBIDRAFT_02g034580[Sorghumbicolor]
260
3.0782e-67
whxa_18031_a05r
2012
3'
Root
656bp
Contig8251
predictedprotein[Hordeumvulgaresubsp.vulgare]
334
1.36479e-89
whxa_19031_a05r
2012
3'
Root
511bp
Contig6827
predictedprotein[Hordeumvulgaresubsp.vulgare]
253
1.51809e-65
whxa_2031_a05r
2012
3'
Root
608bp
Contig13915
PREDICTED:LOWQUALITYPROTEIN:elongationfactor1-alpha-like[Brachypodiumdistachyon]
321
2.70922e-86
whxa_21031_a05r
2012
3'
Root
538bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
186
2.70926e-45
whxa_22031_a05r
2012
3'
Root
537bp
predictedprotein[Hordeumvulgaresubsp.vulgare]
186
2.70926e-45
whxa_23031_a05r
2012
3'
Root
565bp
Contig352
vacuolarATPsynthasesubunitE[Triticumaestivum]
299
3.33005e-79
whxa_24031_a05r
2012
3'
Root
203bp
Contig10510
predictedprotein[Hordeumvulgaresubsp.vulgare]
90
2.21081e-16
whxa_25031_a05r
2012
3'
Root
81bp
Contig8254
whxa_27031_a05r
2012
3'
Root
572bp
Contig10373
predictedprotein[Hordeumvulgaresubsp.vulgare]
326
1.97312e-87