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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 10276
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whh_24002_a01f 2012 5' Spike at heading date 535bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 231 9.39158e-59
whh_25002_a01f 2012 5' Spike at heading date 455bp Contig1589       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.71934e-61
whh_11001_a01r 2012 3' Spike at heading date 461bp Contig1006       predictedprotein[Hordeumvulgaresubsp.vulgare] 161 1.00614e-37
whh_5001_a01f 2012 5' Spike at heading date 523bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 56 3.78807e-06
whh_11001_a01f 2012 5' Spike at heading date 395bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 5.11615e-53
whh_14001_a01f 2012 5' Spike at heading date 486bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 5.47466e-39
whh_19001_a01f 2012 5' Spike at heading date 511bp Contig560       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 130 2.53148e-28
whh_20002_a01f 2012 5' Spike at heading date 403bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 143 1.6972e-32
whh_21001_a01f 2012 5' Spike at heading date 488bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.05186e-82
whh_22001_a01f 2012 5' Spike at heading date 500bp Contig35391       triosephosphat-isomerase[Triticumaestivum] 308 3.91333e-82
whh_8002_a01f 2012 5' Spike at heading date 539bp Contig8621       uncharacterizedproteinLOC100381281[Zeamays] 335 3.61107e-90
whh_9002_a01f 2012 5' Spike at heading date 553bp Contig14164       ATPsynthasesubunit[Triticumaestivum] 296 3.35307e-78
whh_6001_a01f 2012 5' Spike at heading date 38bp            
whh_1001_a01r 2012 3' Spike at heading date 35bp            
whh_14001_a01r 2012 3' Spike at heading date 507bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 6.4977e-16
whh_17002_a01r 2012 3' Spike at heading date 357bp       PREDICTED:probablecarboxylesterase7-like[Brachypodiumdistachyon] 107 1.33835e-21
whh_19001_a01r 2012 3' Spike at heading date 464bp Contig560       uncharacterizedproteinLOC100273170[Zeamays] 148 9.05243e-34
whh_20002_a01r 2012 3' Spike at heading date 174bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 116 3.72349e-24
whh_21001_a01r 2012 3' Spike at heading date 551bp Contig13748       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.00958e-74
whh_22001_a01r 2012 3' Spike at heading date 566bp Contig35391       triosephosphat-isomerase[Triticumaestivum] 259 3.81892e-67
whh_24001_a01r 2012 3' Spike at heading date 432bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 85 7.0675e-15
whh_25001_a01r 2012 3' Spike at heading date 417bp Contig1589       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 3.81506e-45
whh_3001_a01r 2012 3' Spike at heading date 452bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.85787e-39
whh_5001_a01r 2012 3' Spike at heading date 477bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 52 3.8759e-05
whh_6001_a01r 2012 3' Spike at heading date 431bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 52 5.09829e-05
whh_7002_a01r 2012 3' Spike at heading date 180bp Contig32299            
whh_8002_a01r 2012 3' Spike at heading date 506bp Contig8621       RecName:Full=Tubulinbeta-2chain;AltName:Full=Beta-2-tubulin 249 2.20237e-64
whh_9002_a01r 2012 3' Spike at heading date 491bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 221 8.33097e-56
whh_25018_a02f 2012 5' Spike at heading date 502bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 322 2.6067e-86
whh_26018_a02f 2012 5' Spike at heading date 525bp       conservedhypotheticalprotein[BurkholderiacenocepaciaPC184] 42 0.0566052
whh_27018_a02f 2012 5' Spike at heading date 300bp       hypotheticalproteinMGG_13140[Magnaportheoryzae70-15] 41 0.153482
whh_5017_a02f 2012 5' Spike at heading date 582bp       DRF1.3[Aegilopstauschii] 362 4.46087e-98
whh_1017_a02f 2012 5' Spike at heading date 447bp Contig1732       PREDICTED:probableF-actin-cappingproteinsubunitbeta-likeisoform1[Brachypodiumdistachyon] 282 3.97987e-74
whh_19017_a02f 2012 5' Spike at heading date 578bp Contig9283       smalluORF[Leymuschinensis] 101 1.82269e-19
whh_20018_a02f 2012 5' Spike at heading date 343bp       hypotheticalproteinPTSG_05257[Salpingoecasp.ATCC50818] 46 0.00284709
whh_2017_a02f 2012 5' Spike at heading date 523bp Contig16782       PREDICTED:probableF-actin-cappingproteinsubunitbeta-likeisoform1[Brachypodiumdistachyon] 330 1.35911e-88
whh_21017_a02f 2012 5' Spike at heading date 408bp       PREDICTED:uncharacterizedproteinLOC100824590[Brachypodiumdistachyon] 167 1.85684e-39
whh_22017_a02f 2012 5' Spike at heading date 570bp       hypotheticalproteinNECHADRAFT_87678[NectriahaematococcampVI77-13-4] 37 3.12274
whh_23018_a02f 2012 5' Spike at heading date 459bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 82 5.93973e-14
whh_3017_a02f 2012 5' Spike at heading date 571bp Contig1619       predictedprotein[MicromonaspusillaCCMP1545] 49 0.000608029
whh_7017_a02f 2012 5' Spike at heading date 532bp Contig18460       PREDICTED:vacuolarproteinsorting-associatedprotein29-like[Brachypodiumdistachyon] 329 3.23903e-88
whh_1017_a02r 2012 3' Spike at heading date 518bp       F-actincappingproteinbetasubunit[Zeamays] 237 9.00892e-61
whh_17018_a02r 2012 3' Spike at heading date 267bp            
whh_19017_a02r 2012 3' Spike at heading date 70bp Contig9283            
whh_20018_a02r 2012 3' Spike at heading date 508bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 4.06036e-10
whh_22017_a02r 2012 3' Spike at heading date 557bp       PREDICTED:PHandSEC7domain-containingprotein1-like[Meleagrisgallopavo] 43 0.0407095
whh_23018_a02r 2012 3' Spike at heading date 460bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.0889636
whh_25017_a02r 2012 3' Spike at heading date 417bp Contig30329       PREDICTED:uncharacterizedproteinLOC100836004[Brachypodiumdistachyon] 121 8.83604e-26
whh_26017_a02r 2012 3' Spike at heading date 490bp       hypotheticalproteinMGG_13140[Magnaportheoryzae70-15] 41 0.154311
whh_3017_a02r 2012 3' Spike at heading date 450bp Contig1619       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00281428
whh_4017_a02r 2012 3' Spike at heading date 285bp Contig16589       hypotheticalprotein[PlasmodiumbergheistrainANKA] 41 0.151243
whh_5017_a02r 2012 3' Spike at heading date 355bp Contig8862       DRF1.3[Aegilopstauschii] 110 2.06477e-22
whh_7018_a02r 2012 3' Spike at heading date 574bp Contig18460       PREDICTED:vacuolarproteinsorting-associatedprotein29-like[Brachypodiumdistachyon] 131 1.21664e-28
whh_24034_a03f 2012 5' Spike at heading date 408bp Contig26568       PREDICTED:eukaryotictranslationinitiationfactor6-2-like[Brachypodiumdistachyon] 216 2.66886e-54
whh_25034_a03f 2012 5' Spike at heading date 366bp       salttolerantprotein[Triticumaestivum] 211 6.47873e-53
whh_26034_a03f 2012 5' Spike at heading date 391bp Contig28145       PREDICTED:succinate-semialdehydedehydrogenase,mitochondrial-like[Brachypodiumdistachyon] 249 2.80906e-64
whh_11033_a03r 2012 3' Spike at heading date 506bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 6.19218e-67
whh_5033_a03f 2012 5' Spike at heading date 530bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 2.23543e-25
whh_11033_a03f 2012 5' Spike at heading date 504bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 2.71101e-38
whh_13033_a03f 2012 5' Spike at heading date 474bp       PREDICTED:rabGDPdissociationinhibitoralpha-like[Brachypodiumdistachyon] 309 1.76708e-82
whh_18034_a03f 2012 5' Spike at heading date 377bp Contig34878       unknown[Medicagotruncatula] 246 2.42618e-63
whh_19033_a03f 2012 5' Spike at heading date 411bp Contig33024       unknown[Medicagotruncatula] 267 1.31298e-69
whh_20034_a03f 2012 5' Spike at heading date 313bp Contig13364       ZIMmotif-containingprotein[Triticumaestivum] 195 4.798e-48
whh_21033_a03f 2012 5' Spike at heading date 493bp       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 116 2.89e-24
whh_22033_a03f 2012 5' Spike at heading date 562bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 3.55031e-78
whh_23034_a03f 2012 5' Spike at heading date 561bp Contig1829       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 2.33301e-93
whh_8034_a03f 2012 5' Spike at heading date 360bp       hypotheticalproteinAURANDRAFT_70981,partial[Aureococcusanophagefferens] 40 0.20014
whh_6033_a03f 2012 5' Spike at heading date 31bp            
whh_7033_a03f 2012 5' Spike at heading date 501bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 1.10592e-05
whh_13033_a03r 2012 3' Spike at heading date 647bp       Os03g0277000[OryzasativaJaponicaGroup] 330 2.48084e-88
whh_15033_a03r 2012 3' Spike at heading date 308bp       PREDICTED:profilin-2/4-like[Brachypodiumdistachyon] 75 5.58185e-12
whh_18034_a03r 2012 3' Spike at heading date 331bp Contig17075       UQ.GP[syntheticconstruct] 104 1.12847e-20
whh_19033_a03r 2012 3' Spike at heading date 130bp Contig36635       polyubiquitin5[CapsasporaowczarzakiATCC30864] 47 0.00125301
whh_20034_a03r 2012 3' Spike at heading date 309bp Contig2348       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 3.84242e-21
whh_21033_a03r 2012 3' Spike at heading date 462bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 101 7.43979e-20
whh_22033_a03r 2012 3' Spike at heading date 524bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 9.26564e-29
whh_23034_a03r 2012 3' Spike at heading date 490bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 7.03625e-63
whh_24033_a03r 2012 3' Spike at heading date 462bp Contig26568       PREDICTED:eukaryotictranslationinitiationfactor6-2-like[Brachypodiumdistachyon] 244 1.18028e-62
whh_25033_a03r 2012 3' Spike at heading date 434bp       salttolerantprotein[Triticumaestivum] 198 5.72819e-49
whh_26033_a03r 2012 3' Spike at heading date 460bp Contig24891       PREDICTED:succinate-semialdehydedehydrogenase,mitochondrial-like[Brachypodiumdistachyon] 135 4.52684e-30
whh_5033_a03r 2012 3' Spike at heading date 367bp       hypotheticalproteinPANDA_007074[Ailuropodamelanoleuca] 41 0.152049
whh_6033_a03r 2012 3' Spike at heading date 467bp       erythrocytemembraneprotein1[Plasmodiumfalciparum] 42 0.0696497
whh_7034_a03r 2012 3' Spike at heading date 484bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 56 4.40045e-10
whh_8034_a03r 2012 3' Spike at heading date 269bp            
whh_10049_a04f 2012 5' Spike at heading date 532bp       PREDICTED:probableuridinenucleosidase2-like[Brachypodiumdistachyon] 216 3.0599e-54
whh_1049_a04f 2012 5' Spike at heading date 480bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 3.10519e-79
whh_21049_a04f 2012 5' Spike at heading date 577bp            
whh_3049_a04f 2012 5' Spike at heading date 560bp       Os03g0760800[OryzasativaJaponicaGroup] 175 5.35469e-42
whh_10049_a04r 2012 3' Spike at heading date 349bp Contig29384       PREDICTED:probableuridinenucleosidase2-like[Brachypodiumdistachyon] 194 1.0999e-47
whh_1049_a04r 2012 3' Spike at heading date 531bp       cytochromeP450[Triticumaestivum] 235 4.87389e-60
whh_19049_a04r 2012 3' Spike at heading date 306bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 2.05247e-22
whh_21049_a04r 2012 3' Spike at heading date 490bp       hypotheticalproteinTsp_00123[Trichinellaspiralis] 39 0.586381
whh_24049_a04r 2012 3' Spike at heading date 278bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 4.52308e-46
whh_3049_a04r 2012 3' Spike at heading date 507bp       Os03g0760800[OryzasativaJaponicaGroup] 175 6.89406e-42
whh_4049_a04r 2012 3' Spike at heading date 289bp Contig16509       PREDICTED:calcineurinB-likeprotein6-like[Brachypodiumdistachyon] 51 0.00011522
whh_6049_a04r 2012 3' Spike at heading date 265bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 87 1.88646e-15
whh_25066_a05f 2012 5' Spike at heading date 224bp       betatubulin8[Hordeumvulgaresubsp.vulgare] 111 7.20376e-23
whh_27066_a05f 2012 5' Spike at heading date 454bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.66918e-48
whh_11065_a05r 2012 3' Spike at heading date 542bp Contig917       heat-shockprotein[Secalecereale] 320 1.22716e-85
whh_11065_a05f 2012 5' Spike at heading date 509bp Contig1733       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 8.83817e-90
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