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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5728
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whyd_21002_a01f 2012 5' Spikelet at late flowering 356bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 133 1.74389e-29
whyd_23001_a01f 2012 5' Spikelet at late flowering 250bp       PREDICTED:uncharacterizedproteinLOC100839346[Brachypodiumdistachyon] 141 8.2333e-32
whyd_1001_a01f 2012 5' Spikelet at late flowering 533bp Contig9057       alphatubulin-2A[Triticumaestivum] 310 1.19216e-82
whyd_11001_a01f 2012 5' Spikelet at late flowering 252bp Contig35783       PREDICTED:uncharacterizedproteinLOC100826726[Brachypodiumdistachyon] 140 1.83419e-31
whyd_14001_a01f 2012 5' Spikelet at late flowering 409bp Contig9223       PREDICTED:40SribosomalproteinS3-3-like[Brachypodiumdistachyon] 222 2.85143e-56
whyd_18001_a01f 2012 5' Spikelet at late flowering 375bp Contig3227       RecName:Full=HMG1/2-likeprotein 242 2.68246e-62
whyd_19001_a01f 2012 5' Spikelet at late flowering 491bp Contig5328       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 5.92898e-78
whyd_20002_a01f 2012 5' Spikelet at late flowering 489bp Contig35784       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.04233e-86
whyd_2001_a01f 2012 5' Spikelet at late flowering 523bp Contig35785       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 2.85782e-91
whyd_24002_a01f 2012 5' Spikelet at late flowering 229bp Contig8229            
whyd_25001_a01f 2012 5' Spikelet at late flowering 48bp Contig35653       PREDICTED:V-typeprotonATPasesubunitB1-like[Brachypodiumdistachyon] 34 6.66321
whyd_16002_a01f 2012 5' Spikelet at late flowering 521bp Contig3825       RecName:Full=HistoneH2A.2.2 288 4.42948e-76
whyd_22002_a01f 2012 5' Spikelet at late flowering 457bp Contig35786       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 3.81256e-77
whyd_17018_a02f 2012 5' Spikelet at late flowering 482bp Contig25921       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.18285e-54
whyd_21018_a02f 2012 5' Spikelet at late flowering 435bp Contig1200       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 3.67146e-72
whyd_23017_a02f 2012 5' Spikelet at late flowering 161bp       hypotheticalproteinSORBIDRAFT_02g040700[Sorghumbicolor] 96 3.10203e-18
whyd_5018_a02f 2012 5' Spikelet at late flowering 596bp       PREDICTED:solubleinorganicpyrophosphatase-like[Brachypodiumdistachyon] 307 1.84493e-81
whyd_10017_a02f 2012 5' Spikelet at late flowering 348bp Contig4043       putativetubulinalpha-3chain[Miscanthussinensis] 245 5.43346e-63
whyd_1017_a02f 2012 5' Spikelet at late flowering 434bp Contig36294       PREDICTED:histoneH4-like[Glycinemax] 210 1.90247e-52
whyd_13017_a02f 2012 5' Spikelet at late flowering 340bp Contig9374       Chaino,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 84 1.56639e-14
whyd_14017_a02f 2012 5' Spikelet at late flowering 478bp       RecName:Full=ProteinH2A.7;AltName:Full=wcH2A-10;AltName:Full=wcH2A-4 252 3.33304e-65
whyd_19017_a02f 2012 5' Spikelet at late flowering 469bp Contig35789       histoneH4[Zeamays] 157 2.71345e-40
whyd_24018_a02f 2012 5' Spikelet at late flowering 333bp Contig1935       unnamedproteinproduct[Tetraodonnigroviridis] 42 0.0401706
whyd_26017_a02f 2012 5' Spikelet at late flowering 404bp Contig35790       PREDICTED:uncharacterizedproteinLOC100822449[Brachypodiumdistachyon] 78 6.67769e-13
whyd_27018_a02f 2012 5' Spikelet at late flowering 517bp Contig1801       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 3.40166e-60
whyd_29017_a02f 2012 5' Spikelet at late flowering 507bp Contig2646       PREDICTED:eukaryotictranslationinitiationfactor3subunitH-like[Brachypodiumdistachyon] 329 2.1871e-88
whyd_16018_a02f 2012 5' Spikelet at late flowering 243bp            
whyd_22018_a02f 2012 5' Spikelet at late flowering 418bp Contig17992       PREDICTED:U5smallnuclearribonucleoprotein200kDahelicase[Brachypodiumdistachyon] 252 2.61386e-65
whyd_17034_a03f 2012 5' Spikelet at late flowering 435bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 278 5.68848e-73
whyd_23033_a03f 2012 5' Spikelet at late flowering 216bp Contig35791       PREDICTED:uncharacterizedproteinLOC100835709[Brachypodiumdistachyon] 115 4.84908e-24
whyd_5034_a03f 2012 5' Spikelet at late flowering 182bp Contig25144       PREDICTED:heatshockcognateprotein80-like[Glycinemax] 114 1.40585e-23
whyd_1033_a03f 2012 5' Spikelet at late flowering 252bp       extracellulardeoxyribonuclease[MobiluncuscurtisiiATCC51333] 40 0.267233
whyd_18033_a03f 2012 5' Spikelet at late flowering 561bp Contig23037       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 2.25447e-96
whyd_25033_a03f 2012 5' Spikelet at late flowering 350bp Contig13241       predictedprotein[Hordeumvulgaresubsp.vulgare] 201 6.86289e-50
whyd_26033_a03f 2012 5' Spikelet at late flowering 556bp Contig35793       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 2.06188e-46
whyd_27034_a03f 2012 5' Spikelet at late flowering 424bp Contig24253       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.3775e-73
whyd_28033_a03f 2012 5' Spikelet at late flowering 546bp Contig35792       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 290 1.76774e-76
whyd_3033_a03f 2012 5' Spikelet at late flowering 568bp Contig10661       alphatubulin-2A[Triticumaestivum] 329 2.30079e-88
whyd_7033_a03f 2012 5' Spikelet at late flowering 498bp Contig564       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.83899e-55
whyd_9034_a03f 2012 5' Spikelet at late flowering 529bp       PREDICTED:HEATrepeat-containingprotein5B-like[Brachypodiumdistachyon] 119 3.72834e-25
whyd_16034_a03f 2012 5' Spikelet at late flowering 487bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 5.10041e-53
whyd_22034_a03f 2012 5' Spikelet at late flowering 32bp            
whyd_21050_a04f 2012 5' Spikelet at late flowering 500bp Contig3305       Pyrrolo-quinolinequinone[RhodopseudomonaspalustrisHaA2] 40 0.259607
whyd_6050_a04f 2012 5' Spikelet at late flowering 449bp Contig8959       hypotheticalproteinPANDA_018576[Ailuropodamelanoleuca] 209 3.27847e-52
whyd_10049_a04f 2012 5' Spikelet at late flowering 468bp Contig35795       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 2.95877e-77
whyd_1049_a04f 2012 5' Spikelet at late flowering 610bp Contig1868       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 1.09074e-76
whyd_12049_a04f 2012 5' Spikelet at late flowering 593bp Contig4035       cyclophilinA-2[Triticumaestivum] 259 5.67315e-67
whyd_13049_a04f 2012 5' Spikelet at late flowering 506bp Contig879       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 1.91599e-84
whyd_14049_a04f 2012 5' Spikelet at late flowering 533bp Contig12832       PREDICTED:heatshockcognate70kDaprotein2-like[Brachypodiumdistachyon] 353 2.09462e-95
whyd_15049_a04f 2012 5' Spikelet at late flowering 449bp Contig35794       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 4.7341e-51
whyd_18049_a04f 2012 5' Spikelet at late flowering 536bp Contig127       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 4.46249e-93
whyd_2049_a04f 2012 5' Spikelet at late flowering 581bp Contig2467       RecName:Full=HistoneH2A.2.1 288 6.26809e-76
whyd_24050_a04f 2012 5' Spikelet at late flowering 205bp Contig26843       predictedprotein[Hordeumvulgaresubsp.vulgare] 135 7.80102e-30
whyd_29049_a04f 2012 5' Spikelet at late flowering 537bp Contig10661       alphatubulin-2A[Triticumaestivum] 327 9.83389e-88
whyd_3049_a04f 2012 5' Spikelet at late flowering 573bp Contig36528       predictedprotein[Hordeumvulgaresubsp.vulgare] 397 9.10193e-109
whyd_7049_a04f 2012 5' Spikelet at late flowering 460bp Contig821       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 217 3.62842e-71
whyd_8049_a04f 2012 5' Spikelet at late flowering 516bp Contig4728       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 2.15112e-83
whyd_16050_a04f 2012 5' Spikelet at late flowering 435bp Contig30183       predictedprotein[Hordeumvulgaresubsp.vulgare] 155 4.25798e-36
whyd_22050_a04f 2012 5' Spikelet at late flowering 445bp Contig8820       RecName:Full=Elongationfactor1-beta;Short=EF-1-beta;AltName:Full=Elongationfactor1-beta';Short=EF-1-beta';AltName:Full=Elongationfactor1B-alpha2;AltName:Full=eEF-1Balpha2 284 1.05641e-74
whyd_21066_a05f 2012 5' Spikelet at late flowering 418bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 2.27926e-77
whyd_23065_a05f 2012 5' Spikelet at late flowering 34bp            
whyd_6066_a05f 2012 5' Spikelet at late flowering 427bp Contig8278       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.41305e-71
whyd_10065_a05f 2012 5' Spikelet at late flowering 227bp Contig5005       PREDICTED:CBSdomain-containingproteinCBSX3,mitochondrial-like[Brachypodiumdistachyon] 92 4.50744e-17
whyd_1065_a05f 2012 5' Spikelet at late flowering 513bp Contig22645       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 3.33505e-97
whyd_12065_a05f 2012 5' Spikelet at late flowering 524bp Contig618       OSIGBa0096P03.8[OryzasativaIndicaGroup] 315 3.46424e-84
whyd_13065_a05f 2012 5' Spikelet at late flowering 579bp Contig8606       PREDICTED:40SribosomalproteinS13-1-like[Brachypodiumdistachyon] 189 3.96267e-46
whyd_14065_a05f 2012 5' Spikelet at late flowering 438bp Contig35796       HistoneH4[Heterocephalusglaber] 205 6.09399e-51
whyd_18065_a05f 2012 5' Spikelet at late flowering 503bp Contig7027       plastidglutaminesynthetase2[Triticumaestivum] 300 1.06077e-79
whyd_19065_a05f 2012 5' Spikelet at late flowering 521bp Contig10936       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 5.94511e-97
whyd_2065_a05f 2012 5' Spikelet at late flowering 413bp Contig22645       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.49257e-73
whyd_26065_a05f 2012 5' Spikelet at late flowering 484bp Contig1733       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 1.47029e-84
whyd_27066_a05f 2012 5' Spikelet at late flowering 99bp       PREDICTED:heatshockprotein83-like[Vitisvinifera] 60 1.85131e-07
whyd_28065_a05f 2012 5' Spikelet at late flowering 408bp Contig3335       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 8.55007e-53
whyd_29065_a05f 2012 5' Spikelet at late flowering 463bp Contig7490       PREDICTED:autophagy-relatedprotein8C-like[Brachypodiumdistachyon] 232 2.79452e-59
whyd_4065_a05f 2012 5' Spikelet at late flowering 466bp Contig1477       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 3.39238e-81
whyd_8065_a05f 2012 5' Spikelet at late flowering 519bp Contig35797       hypotheticalproteinOsI_03686[OryzasativaIndicaGroup] 93 2.74415e-17
whyd_9066_a05f 2012 5' Spikelet at late flowering 530bp       Peritrophin-1[Camponotusfloridanus] 37 1.90562
whyd_21082_a06f 2012 5' Spikelet at late flowering 210bp       PREDICTED:hypotheticalproteinLOC100745455[Bombusimpatiens] 49 0.000428198
whyd_23081_a06f 2012 5' Spikelet at late flowering 527bp Contig35798       PREDICTED:histoneH2B.2-likeisoform1[Brachypodiumdistachyon] 207 1.77566e-51
whyd_5082_a06f 2012 5' Spikelet at late flowering 475bp Contig17558       PREDICTED:uncharacterizedproteinLOC100832863[Brachypodiumdistachyon] 150 1.37196e-34
whyd_6082_a06f 2012 5' Spikelet at late flowering 538bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 310 1.59085e-82
whyd_10081_a06f 2012 5' Spikelet at late flowering 258bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 161 6.06862e-38
whyd_1081_a06f 2012 5' Spikelet at late flowering 576bp Contig35799       membraneprotein,PF01595family[HaemophilusparainfluenzaeHK262] 38 1.0921
whyd_11081_a06f 2012 5' Spikelet at late flowering 137bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 91 9.82158e-17
whyd_13081_a06f 2012 5' Spikelet at late flowering 483bp Contig35800       saltstress-responsiveprotein[Triticumaestivum] 172 3.37341e-44
whyd_18081_a06f 2012 5' Spikelet at late flowering 434bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 303 1.65126e-80
whyd_19081_a06f 2012 5' Spikelet at late flowering 335bp Contig35801       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 4.36985e-57
whyd_20082_a06f 2012 5' Spikelet at late flowering 590bp Contig35805       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 7.72058e-101
whyd_28081_a06f 2012 5' Spikelet at late flowering 457bp Contig35802       PREDICTED:26Sproteasomenon-ATPaseregulatorysubunitRPN12A-like[Brachypodiumdistachyon] 190 2.03152e-46
whyd_29081_a06f 2012 5' Spikelet at late flowering 554bp Contig2842       RecName:Full=HistoneH2B.3;AltName:Full=wcH2B-8 266 2.22116e-69
whyd_4081_a06f 2012 5' Spikelet at late flowering 489bp Contig28243       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 3.75669e-56
whyd_7081_a06f 2012 5' Spikelet at late flowering 617bp Contig4382       PREDICTED:uncharacterizedproteinLOC100829694[Brachypodiumdistachyon] 262 5.66524e-68
whyd_9082_a06f 2012 5' Spikelet at late flowering 354bp Contig35803       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 5.29557e-10
whyd_16082_a06f 2012 5' Spikelet at late flowering 471bp Contig35804       PREDICTED:uncharacterizedproteinLOC100830069[Brachypodiumdistachyon] 142 4.92344e-32
whyd_17002_a07f 2012 5' Spikelet at late flowering 525bp Contig3367       predictedprotein[Hordeumvulgaresubsp.vulgare] 66 2.86796e-09
whyd_21002_a07f 2012 5' Spikelet at late flowering 486bp Contig21812       PREDICTED:ubiquitin-60SribosomalproteinL40-2-like[Brachypodiumdistachyon] 228 5.26587e-58
whyd_6002_a07f 2012 5' Spikelet at late flowering 556bp Contig26097       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 371 4.99681e-101
whyd_10001_a07f 2012 5' Spikelet at late flowering 318bp Contig5973       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 4.9413e-56
whyd_1001_a07f 2012 5' Spikelet at late flowering 506bp       NBS-LRRclassRGA[Aegilopstauschii] 182 4.31816e-44
whyd_11001_a07f 2012 5' Spikelet at late flowering 286bp Contig14423       hypotheticalproteinVOLCADRAFT_90250[Volvoxcarterif.nagariensis] 51 0.000111904
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