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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5148
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsc_11015_a01r 2012 3' Shoot grown with cold treatment 561bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 157 2.00734e-36
whsc_14015_a01r 2012 3' Shoot grown with cold treatment 608bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 9.8425e-86
whsc_16015_a01r 2012 3' Shoot grown with cold treatment 633bp Contig6671       RecName:Full=T-complexprotein1subunitepsilon;Short=TCP-1-epsilon;AltName:Full=CCT-epsilon;AltName:Full=TCP-K19 278 1.04885e-72
whsc_18015_a01r 2012 3' Shoot grown with cold treatment 581bp Contig5133       glutathioneS-transferase1[Triticummonococcum] 351 7.87418e-95
whsc_19015_a01r 2012 3' Shoot grown with cold treatment 438bp Contig28116       histoneH4[Zeamays] 211 6.51087e-53
whsc_20015_a01r 2012 3' Shoot grown with cold treatment 59bp Contig21495       MBD2[Triticumaestivum] 37 0.996994
whsc_3015_a01r 2012 3' Shoot grown with cold treatment 576bp Contig9712       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.95029e-60
whsc_7015_a01r 2012 3' Shoot grown with cold treatment 581bp Contig569       ribosomalRNA-processingprotein46[Hordeumvulgaresubsp.vulgare] 209 4.83282e-52
whsc_9015_a01r 2012 3' Shoot grown with cold treatment 607bp Contig425       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.00589e-74
whsc_11015_a02r 2012 3' Shoot grown with cold treatment 658bp Contig5134       hypotheticalproteinAND_02159[Anophelesdarlingi] 47 0.0025515
whsc_12015_a02r 2012 3' Shoot grown with cold treatment 596bp Contig26393       PREDICTED:zincfingerprotein7-like[Brachypodiumdistachyon] 208 6.83784e-52
whsc_13015_a02r 2012 3' Shoot grown with cold treatment 578bp Contig24524       PREDICTED:DEAD-boxATP-dependentRNAhelicase56-like[Brachypodiumdistachyon] 314 1.04892e-83
whsc_14015_a02r 2012 3' Shoot grown with cold treatment 599bp Contig36244       U1snRNP-interacting70kDaprotein[Triticumaestivum] 293 2.10081e-77
whsc_15015_a02r 2012 3' Shoot grown with cold treatment 388bp       PREDICTED:uncharacterizedproteinLOC100824418[Brachypodiumdistachyon] 175 3.96308e-42
whsc_17015_a02r 2012 3' Shoot grown with cold treatment 577bp Contig33734       UDP-D-glucoseepimerase3[Hordeumvulgare] 267 1.92047e-69
whsc_18015_a02r 2012 3' Shoot grown with cold treatment 462bp       dehydrin[Triticumdurum] 178 7.95365e-43
whsc_19015_a02r 2012 3' Shoot grown with cold treatment 541bp Contig3411       PREDICTED:adenosinekinase2-like[Brachypodiumdistachyon] 277 1.52421e-72
whsc_20015_a02r 2012 3' Shoot grown with cold treatment 535bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 203 2.09708e-50
whsc_2015_a02r 2012 3' Shoot grown with cold treatment 692bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.62074e-94
whsc_3015_a02r 2012 3' Shoot grown with cold treatment 668bp Contig23967       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 343 2.35802e-92
whsc_8015_a02r 2012 3' Shoot grown with cold treatment 370bp       PREDICTED:transcriptioninitiationfactorIIAsubunit2-like[Brachypodiumdistachyon] 120 2.64321e-25
whsc_10016_a03r 2012 3' Shoot grown with cold treatment 545bp       conservedhypotheticalprotein[LeishmaniamajorstrainFriedlin] 42 0.0491555
whsc_12016_a03r 2012 3' Shoot grown with cold treatment 593bp Contig5194       beta-glucosidase[Triticumaestivum] 181 1.50336e-43
whsc_14016_a03r 2012 3' Shoot grown with cold treatment 640bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 6.23723e-44
whsc_15016_a03r 2012 3' Shoot grown with cold treatment 381bp Contig12266       dehydrin[Triticumdurum] 82 1.81877e-24
whsc_16016_a03r 2012 3' Shoot grown with cold treatment 604bp       hypotheticalproteinOsJ_03106[OryzasativaJaponicaGroup] 51 0.000141182
whsc_17016_a03r 2012 3' Shoot grown with cold treatment 459bp Contig34878       PREDICTED:LOWQUALITYPROTEIN:polyubiquitin-C-like[Brachypodiumdistachyon] 168 6.30206e-40
whsc_18016_a03r 2012 3' Shoot grown with cold treatment 43bp            
whsc_19016_a03r 2012 3' Shoot grown with cold treatment 412bp Contig5135       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 2.76967e-27
whsc_2016_a03r 2012 3' Shoot grown with cold treatment 530bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 217 1.75488e-54
whsc_4016_a03r 2012 3' Shoot grown with cold treatment 729bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 2.84477e-60
whsc_7016_a03r 2012 3' Shoot grown with cold treatment 616bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 316 3.30591e-84
whsc_8016_a03r 2012 3' Shoot grown with cold treatment 282bp Contig6337       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit7-likeisoform1[Brachypodiumdistachyon] 46 0.00361274
whsc_1016_a04r 2012 3' Shoot grown with cold treatment 610bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 1.36873e-34
whsc_11016_a04r 2012 3' Shoot grown with cold treatment 471bp Contig14370       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.67654e-64
whsc_12016_a04r 2012 3' Shoot grown with cold treatment 576bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 3.72204e-89
whsc_13016_a04r 2012 3' Shoot grown with cold treatment 570bp Contig11666       PREDICTED:microtubule-actincross-linkingfactor1-like[Nasoniavitripennis] 35 8.92639
whsc_14016_a04r 2012 3' Shoot grown with cold treatment 37bp            
whsc_15016_a04r 2012 3' Shoot grown with cold treatment 583bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 9.30928e-35
whsc_16016_a04r 2012 3' Shoot grown with cold treatment 387bp Contig15046       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 141 8.31613e-32
whsc_17016_a04r 2012 3' Shoot grown with cold treatment 611bp Contig9237       ChainA,CrystalStructureOfAMutantBeta-GlucosidaseInWheatComplexedWithDimboa-Glc 170 2.84736e-40
whsc_18016_a04r 2012 3' Shoot grown with cold treatment 346bp Contig22065       14-3-3protein[Triticumaestivum] 59 3.23753e-07
whsc_19016_a04r 2012 3' Shoot grown with cold treatment 580bp Contig8342       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 3.81155e-65
whsc_20016_a04r 2012 3' Shoot grown with cold treatment 507bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 184 8.7008e-45
whsc_2016_a04r 2012 3' Shoot grown with cold treatment 527bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 2.03162e-47
whsc_3016_a04r 2012 3' Shoot grown with cold treatment 188bp Contig24067            
whsc_6016_a04r 2012 3' Shoot grown with cold treatment 654bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 7.16613e-83
whsc_8016_a04r 2012 3' Shoot grown with cold treatment 254bp       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit7-likeisoform1[Brachypodiumdistachyon] 46 0.00372893
whsc_9016_a04r 2012 3' Shoot grown with cold treatment 441bp Contig1213       metallothionein-likeproteintype3[Hordeumvulgaresubsp.vulgare] 135 5.9046e-30
whsc_10031_a05r 2012 3' Shoot grown with cold treatment 55bp Contig27566            
whsc_12031_a05r 2012 3' Shoot grown with cold treatment 621bp Contig5136       PREDICTED:probableL-ascorbateperoxidase6,chloroplastic-likeisoform2[Brachypodiumdistachyon] 250 1.72978e-64
whsc_13031_a05r 2012 3' Shoot grown with cold treatment 610bp Contig8368       ribosomalproteinS7[Triticumaestivum] 324 1.51848e-86
whsc_14031_a05r 2012 3' Shoot grown with cold treatment 589bp Contig28773       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 1.01774e-68
whsc_15031_a05r 2012 3' Shoot grown with cold treatment 33bp            
whsc_17031_a05r 2012 3' Shoot grown with cold treatment 556bp Contig22645       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 3.73158e-72
whsc_20031_a05r 2012 3' Shoot grown with cold treatment 100bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 8.28542e-08
whsc_2031_a05r 2012 3' Shoot grown with cold treatment 312bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 201 8.77642e-50
whsc_3031_a05r 2012 3' Shoot grown with cold treatment 354bp Contig9138       PREDICTED:aquaporinPIP1-5-like[Brachypodiumdistachyon] 41 0.118247
whsc_5031_a05r 2012 3' Shoot grown with cold treatment 514bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 175 4.10416e-42
whsc_6031_a05r 2012 3' Shoot grown with cold treatment 605bp Contig5466       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 3.33307e-86
whsc_7031_a05r 2012 3' Shoot grown with cold treatment 633bp       3-ketoacyl-CoAthiolase-likeprotein[Triticumaestivum] 319 4.16015e-85
whsc_1031_a06r 2012 3' Shoot grown with cold treatment 226bp Contig5137       unnamedproteinproduct[Triticumturgidum] 48 0.00097486
whsc_11031_a06r 2012 3' Shoot grown with cold treatment 65bp            
whsc_13031_a06r 2012 3' Shoot grown with cold treatment 538bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 3.7717e-55
whsc_14031_a06r 2012 3' Shoot grown with cold treatment 609bp Contig9316       Os07g0167700[OryzasativaJaponicaGroup] 53 3.8279e-05
whsc_16031_a06r 2012 3' Shoot grown with cold treatment 280bp       ankyrinrepeatprotein[TrichomonasvaginalisG3] 37 1.28494
whsc_17031_a06r 2012 3' Shoot grown with cold treatment 612bp       PREDICTED:anaphase-promotingcomplexsubunitcdc20-likeisoform2[Brachypodiumdistachyon] 317 1.44215e-84
whsc_19031_a06r 2012 3' Shoot grown with cold treatment 608bp Contig29928       predictedprotein[Hordeumvulgaresubsp.vulgare] 278 7.31629e-73
whsc_20031_a06r 2012 3' Shoot grown with cold treatment 567bp Contig2366       PREDICTED:ubiquitincarboxyl-terminalhydrolase12-like[Brachypodiumdistachyon] 104 2.05334e-20
whsc_5031_a06r 2012 3' Shoot grown with cold treatment 667bp Contig27181       predictedprotein[Hordeumvulgaresubsp.vulgare] 278 1.21667e-72
whsc_7031_a06r 2012 3' Shoot grown with cold treatment 601bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 4.45818e-67
whsc_8031_a06r 2012 3' Shoot grown with cold treatment 245bp Contig28585       PREDICTED:uncharacterizedGPI-anchoredproteinAt3g06035-like[Brachypodiumdistachyon] 146 1.97323e-33
whsc_9031_a06r 2012 3' Shoot grown with cold treatment 420bp Contig33572       ferritin1A[Triticumaestivum] 277 9.90965e-73
whsc_10032_a07r 2012 3' Shoot grown with cold treatment 461bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 4.49546e-54
whsc_1032_a07r 2012 3' Shoot grown with cold treatment 112bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 42 2.8023e-08
whsc_12032_a07r 2012 3' Shoot grown with cold treatment 376bp Contig23158       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 142 4.93415e-32
whsc_14032_a07r 2012 3' Shoot grown with cold treatment 139bp Contig18009       PREDICTED:carbamoyl-phosphatesynthaselargechain-like[Brachypodiumdistachyon] 91 7.52012e-17
whsc_15032_a07r 2012 3' Shoot grown with cold treatment 555bp Contig11590       triticainalpha[Triticumaestivum] 247 1.85627e-63
whsc_16032_a07r 2012 3' Shoot grown with cold treatment 559bp Contig7393       PREDICTED:ABCtransporterFfamilymember1-like[Brachypodiumdistachyon] 306 1.97407e-81
whsc_17032_a07r 2012 3' Shoot grown with cold treatment 615bp Contig2491       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 2.7592e-83
whsc_18032_a07r 2012 3' Shoot grown with cold treatment 307bp Contig9721       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 2.95975e-13
whsc_19032_a07r 2012 3' Shoot grown with cold treatment 533bp Contig26372       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 4.02425e-30
whsc_2032_a07r 2012 3' Shoot grown with cold treatment 431bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 204 8.02707e-51
whsc_3032_a07r 2012 3' Shoot grown with cold treatment 645bp Contig24152       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 200 2.24163e-49
whsc_4032_a07r 2012 3' Shoot grown with cold treatment 433bp Contig16319       coldacclimationproteinWCOR413[Triticumaestivum] 204 8.02707e-51
whsc_5032_a07r 2012 3' Shoot grown with cold treatment 744bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.51295e-96
whsc_6032_a07r 2012 3' Shoot grown with cold treatment 651bp Contig17101       ChainK,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 351 1.05288e-94
whsc_7032_a07r 2012 3' Shoot grown with cold treatment 614bp Contig10727       Glyco_hydro_1domain-containingprotein[Triticumaestivum] 366 2.10287e-99
whsc_9032_a07r 2012 3' Shoot grown with cold treatment 477bp Contig29713       hypotheticalproteinOsI_12322[OryzasativaIndicaGroup] 218 5.33364e-55
whsc_10032_a08r 2012 3' Shoot grown with cold treatment 609bp Contig8987       PREDICTED:40SribosomalproteinS21-like[Brachypodiumdistachyon] 162 7.75411e-38
whsc_1032_a08r 2012 3' Shoot grown with cold treatment 93bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 41 0.000134339
whsc_11032_a08r 2012 3' Shoot grown with cold treatment 615bp       SNF1-relatedproteinkinase[Hordeumvulgaresubsp.vulgare] 244 1.22243e-62
whsc_14032_a08r 2012 3' Shoot grown with cold treatment 659bp Contig9840       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 3.0842e-81
whsc_15032_a08r 2012 3' Shoot grown with cold treatment 655bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 285 9.49539e-75
whsc_16032_a08r 2012 3' Shoot grown with cold treatment 547bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 2.06383e-72
whsc_18032_a08r 2012 3' Shoot grown with cold treatment 110bp Contig7154       PREDICTED:2,3-bisphosphoglycerate-independentphosphoglyceratemutase-like[Brachypodiumdistachyon] 73 2.84477e-11
whsc_19032_a08r 2012 3' Shoot grown with cold treatment 616bp Contig34706       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 5.42251e-55
whsc_20032_a08r 2012 3' Shoot grown with cold treatment 115bp Contig30349            
whsc_2032_a08r 2012 3' Shoot grown with cold treatment 78bp            
whsc_3032_a08r 2012 3' Shoot grown with cold treatment 571bp Contig9547       PREDICTED:60SribosomalproteinL5-1-like[Brachypodiumdistachyon] 259 3.80081e-67
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