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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5122
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsc_11015_a01f 2012 5' Shoot grown with cold treatment 595bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.69163e-106
whsc_14015_a01f 2012 5' Shoot grown with cold treatment 608bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 1.41468e-100
whsc_15015_a01f 2012 5' Shoot grown with cold treatment 589bp Contig10584       PREDICTED:uncharacterizedproteinLOC100826321[Brachypodiumdistachyon] 162 7.00083e-38
whsc_16015_a01f 2012 5' Shoot grown with cold treatment 549bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 6.9431e-100
whsc_17015_a01f 2012 5' Shoot grown with cold treatment 204bp       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 107 1.74767e-21
whsc_18015_a01f 2012 5' Shoot grown with cold treatment 552bp Contig5133       glutathione-S-transferase28e45[Triticumaestivum] 321 9.73335e-86
whsc_19015_a01f 2012 5' Shoot grown with cold treatment 467bp Contig28116       histoneH4[Zeamays] 211 6.63748e-53
whsc_20015_a01f 2012 5' Shoot grown with cold treatment 85bp Contig21495       MBD2[Triticumaestivum] 61 8.40914e-08
whsc_3015_a01f 2012 5' Shoot grown with cold treatment 601bp       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 232 4.46853e-59
whsc_7015_a01f 2012 5' Shoot grown with cold treatment 582bp Contig569       ribosomalRNA-processingprotein46[Hordeumvulgaresubsp.vulgare] 340 1.8153e-91
whsc_9015_a01f 2012 5' Shoot grown with cold treatment 260bp Contig425       putative40SribosomalproteinS8[Prunusdulcis] 171 7.63243e-41
whsc_11015_a02f 2012 5' Shoot grown with cold treatment 632bp Contig24983       putativeSETdomain-containingprotein[NeosporacaninumLiverpool] 51 0.000272349
whsc_12015_a02f 2012 5' Shoot grown with cold treatment 507bp Contig26393       PREDICTED:zincfingerprotein7-like[Brachypodiumdistachyon] 290 1.47043e-76
whsc_13015_a02f 2012 5' Shoot grown with cold treatment 610bp Contig24524       PREDICTED:DEAD-boxATP-dependentRNAhelicase56-like[Brachypodiumdistachyon] 361 8.70876e-98
whsc_14015_a02f 2012 5' Shoot grown with cold treatment 601bp       U1snRNP-interacting70kDaprotein[Triticumaestivum] 406 1.7289e-111
whsc_15015_a02f 2012 5' Shoot grown with cold treatment 573bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 5.75422e-79
whsc_17015_a02f 2012 5' Shoot grown with cold treatment 518bp Contig33734       UDP-D-glucoseepimerase3[Hordeumvulgare] 300 1.13173e-79
whsc_18015_a02f 2012 5' Shoot grown with cold treatment 524bp       dehydrin[Triticumdurum] 293 1.40973e-77
whsc_19015_a02f 2012 5' Shoot grown with cold treatment 522bp Contig3411       PREDICTED:adenosinekinase2-like[Brachypodiumdistachyon] 294 1.07939e-77
whsc_20015_a02f 2012 5' Shoot grown with cold treatment 477bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 117 1.2871e-24
whsc_2015_a02f 2012 5' Shoot grown with cold treatment 651bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whsc_3015_a02f 2012 5' Shoot grown with cold treatment 572bp Contig23967       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 341 5.92713e-92
whsc_6015_a02f 2012 5' Shoot grown with cold treatment 328bp Contig28610       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.15811e-51
whsc_8015_a02f 2012 5' Shoot grown with cold treatment 181bp       PREDICTED:transcriptioninitiationfactorIIAsubunit2-like[Brachypodiumdistachyon] 99 2.74368e-19
whsc_9015_a02f 2012 5' Shoot grown with cold treatment 36bp            
whsc_10016_a03f 2012 5' Shoot grown with cold treatment 575bp       conservedhypotheticalprotein[LeishmaniamajorstrainFriedlin] 42 0.0579082
whsc_12016_a03f 2012 5' Shoot grown with cold treatment 655bp       beta-glucosidase[Triticumaestivum] 219 8.25636e-55
whsc_14016_a03f 2012 5' Shoot grown with cold treatment 564bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 2.4199e-82
whsc_15016_a03f 2012 5' Shoot grown with cold treatment 391bp Contig12266       dehydrin[Triticumdurum] 62 1.5748e-18
whsc_16016_a03f 2012 5' Shoot grown with cold treatment 621bp       hypotheticalproteinOsJ_03106[OryzasativaJaponicaGroup] 75 1.30081e-11
whsc_17016_a03f 2012 5' Shoot grown with cold treatment 502bp Contig34878       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 294 9.92846e-78
whsc_18016_a03f 2012 5' Shoot grown with cold treatment 192bp            
whsc_20016_a03f 2012 5' Shoot grown with cold treatment 53bp Contig18577            
whsc_2016_a03f 2012 5' Shoot grown with cold treatment 555bp       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 189 3.45068e-46
whsc_4016_a03f 2012 5' Shoot grown with cold treatment 667bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 1.46673e-118
whsc_7016_a03f 2012 5' Shoot grown with cold treatment 305bp       smalluORF[Leymuschinensis] 96 3.06701e-18
whsc_8016_a03f 2012 5' Shoot grown with cold treatment 312bp       hypotheticalprotein[EntamoebadisparSAW760] 31 0.318219
whsc_10016_a04f 2012 5' Shoot grown with cold treatment 276bp       unnamedproteinproduct[PseudomonasfluorescensPf-5] 35 6.42267
whsc_1016_a04f 2012 5' Shoot grown with cold treatment 256bp       putativeTdLSC37protein[Triticumdurum] 118 5.91205e-25
whsc_12016_a04f 2012 5' Shoot grown with cold treatment 569bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 6.42333e-99
whsc_13016_a04f 2012 5' Shoot grown with cold treatment 628bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 3.4217e-108
whsc_15016_a04f 2012 5' Shoot grown with cold treatment 550bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 2.85987e-98
whsc_16016_a04f 2012 5' Shoot grown with cold treatment 422bp Contig15046       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 113 1.88717e-23
whsc_17016_a04f 2012 5' Shoot grown with cold treatment 618bp Contig8602       beta-glucosidase[Triticumaestivum] 433 1.8817e-119
whsc_18016_a04f 2012 5' Shoot grown with cold treatment 576bp Contig22065       14-3-3protein[Triticumaestivum] 230 1.49936e-58
whsc_19016_a04f 2012 5' Shoot grown with cold treatment 620bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 2.41371e-66
whsc_20016_a04f 2012 5' Shoot grown with cold treatment 561bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 167 2.48735e-39
whsc_2016_a04f 2012 5' Shoot grown with cold treatment 494bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 1.85176e-47
whsc_3016_a04f 2012 5' Shoot grown with cold treatment 217bp Contig24067            
whsc_4016_a04f 2012 5' Shoot grown with cold treatment 86bp       PREDICTED:tubulinalpha-1chain-like[Brachypodiumdistachyon] 63 2.89018e-08
whsc_6016_a04f 2012 5' Shoot grown with cold treatment 614bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 7.704e-110
whsc_9016_a04f 2012 5' Shoot grown with cold treatment 485bp Contig1213       metallothionein-likeproteintype3[Hordeumvulgaresubsp.vulgare] 135 6.067e-30
whsc_12031_a05f 2012 5' Shoot grown with cold treatment 163bp       sucrose-phosphatesynthase7,partial[Triticumaestivum] 82 4.62074e-14
whsc_13031_a05f 2012 5' Shoot grown with cold treatment 606bp Contig8368       ribosomalproteinS7[Triticumaestivum] 371 8.17165e-101
whsc_14031_a05f 2012 5' Shoot grown with cold treatment 116bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 76 2.55753e-12
whsc_15031_a05f 2012 5' Shoot grown with cold treatment 53bp Contig9718            
whsc_17031_a05f 2012 5' Shoot grown with cold treatment 516bp Contig22645       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 1.06265e-98
whsc_2031_a05f 2012 5' Shoot grown with cold treatment 697bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 462 6.45613e-128
whsc_3031_a05f 2012 5' Shoot grown with cold treatment 416bp Contig9138       H+-orNa+-translocatingf-type,v-typeandA-typeATPasesuperfamily[MicromonaspusillaCCMP1545] 38 0.753238
whsc_5031_a05f 2012 5' Shoot grown with cold treatment 607bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 200 2.53213e-49
whsc_6031_a05f 2012 5' Shoot grown with cold treatment 538bp Contig5466       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 1.03116e-81
whsc_1031_a06f 2012 5' Shoot grown with cold treatment 284bp Contig5137       unnamedproteinproduct[Triticumturgidum] 39 0.44005
whsc_11031_a06f 2012 5' Shoot grown with cold treatment 97bp            
whsc_13031_a06f 2012 5' Shoot grown with cold treatment 537bp Contig8292       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 1.45611e-89
whsc_14031_a06f 2012 5' Shoot grown with cold treatment 568bp Contig9316       Os07g0167700[OryzasativaJaponicaGroup] 53 3.18258e-05
whsc_16031_a06f 2012 5' Shoot grown with cold treatment 297bp       ankyrinrepeatprotein[TrichomonasvaginalisG3] 37 1.30405
whsc_17031_a06f 2012 5' Shoot grown with cold treatment 624bp       PREDICTED:anaphase-promotingcomplexsubunitcdc20-like,partial[Brachypodiumdistachyon] 284 1.89505e-74
whsc_19031_a06f 2012 5' Shoot grown with cold treatment 582bp Contig31853       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 277 1.88727e-72
whsc_20031_a06f 2012 5' Shoot grown with cold treatment 627bp       PREDICTED:ubiquitincarboxyl-terminalhydrolase12-like[Brachypodiumdistachyon] 403 1.64101e-110
whsc_3031_a06f 2012 5' Shoot grown with cold treatment 589bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 377 1.07732e-102
whsc_4031_a06f 2012 5' Shoot grown with cold treatment 675bp       GE15311[Drosophilayakuba] 39 0.968408
whsc_5031_a06f 2012 5' Shoot grown with cold treatment 725bp Contig27181       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 6.19038e-108
whsc_8031_a06f 2012 5' Shoot grown with cold treatment 277bp Contig28585       PREDICTED:uncharacterizedGPI-anchoredproteinAt3g06035-like[Brachypodiumdistachyon] 127 1.6162e-27
whsc_10032_a07f 2012 5' Shoot grown with cold treatment 549bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 6.63911e-71
whsc_1032_a07f 2012 5' Shoot grown with cold treatment 142bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 78 7.93561e-13
whsc_12032_a07f 2012 5' Shoot grown with cold treatment 313bp Contig34241       MultidrugresistanceproteinABCtransporterfamily[Medicagotruncatula] 194 1.06888e-47
whsc_14032_a07f 2012 5' Shoot grown with cold treatment 601bp       PREDICTED:carbamoyl-phosphatesynthaselargechain-like[Brachypodiumdistachyon] 390 2.18706e-106
whsc_15032_a07f 2012 5' Shoot grown with cold treatment 592bp Contig11590       triticainalpha[Triticumaestivum] 422 2.96659e-116
whsc_17032_a07f 2012 5' Shoot grown with cold treatment 543bp Contig2491       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 3.92935e-100
whsc_18032_a07f 2012 5' Shoot grown with cold treatment 348bp Contig9721       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.02322e-13
whsc_19032_a07f 2012 5' Shoot grown with cold treatment 567bp Contig28044       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 4.6252e-97
whsc_2032_a07f 2012 5' Shoot grown with cold treatment 533bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 7.35095e-24
whsc_3032_a07f 2012 5' Shoot grown with cold treatment 661bp       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 183 3.98477e-44
whsc_4032_a07f 2012 5' Shoot grown with cold treatment 471bp Contig16319       coldacclimationproteinWCOR413[Triticumaestivum] 192 5.39422e-47
whsc_5032_a07f 2012 5' Shoot grown with cold treatment 718bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 441 9.55359e-122
whsc_6032_a07f 2012 5' Shoot grown with cold treatment 502bp Contig17101       ChainK,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 324 6.89168e-87
whsc_9032_a07f 2012 5' Shoot grown with cold treatment 443bp Contig29713       hypotheticalproteinOsI_12322[OryzasativaIndicaGroup] 187 1.34569e-45
whsc_10032_a08f 2012 5' Shoot grown with cold treatment 49bp Contig2269       PREDICTED:40SribosomalproteinS21-like[Brachypodiumdistachyon] 37 0.839574
whsc_1032_a08f 2012 5' Shoot grown with cold treatment 140bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 79 2.94807e-13
whsc_11032_a08f 2012 5' Shoot grown with cold treatment 544bp       SNF1-relatedproteinkinase[Hordeumvulgaresubsp.vulgare] 294 1.23e-77
whsc_14032_a08f 2012 5' Shoot grown with cold treatment 614bp Contig9840       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 5.53387e-100
whsc_15032_a08f 2012 5' Shoot grown with cold treatment 532bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 285 5.36378e-75
whsc_16032_a08f 2012 5' Shoot grown with cold treatment 154bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 1.77256e-13
whsc_17032_a08f 2012 5' Shoot grown with cold treatment 642bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 9.21286e-80
whsc_18032_a08f 2012 5' Shoot grown with cold treatment 424bp Contig7154       PREDICTED:2,3-bisphosphoglycerate-independentphosphoglyceratemutase-like[Brachypodiumdistachyon] 269 2.05767e-70
whsc_19032_a08f 2012 5' Shoot grown with cold treatment 565bp Contig29312       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 4.95308e-91
whsc_20032_a08f 2012 5' Shoot grown with cold treatment 141bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 3.35478e-17
whsc_2032_a08f 2012 5' Shoot grown with cold treatment 121bp            
whsc_3032_a08f 2012 5' Shoot grown with cold treatment 568bp Contig4670       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 1.53971e-92
whsc_4032_a08f 2012 5' Shoot grown with cold treatment 644bp Contig5138       PREDICTED:serine/threonine-proteinphosphatasePP2A-2catalyticsubunit-like[Brachypodiumdistachyon] 344 1.25528e-92
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