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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4842
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whvd_10015_a01r 2012 3' Shoot grown with dessication 612bp Contig5834       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 241 1.02027e-61
whvd_12015_a01r 2012 3' Shoot grown with dessication 237bp Contig7773       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.17615e-35
whvd_15015_a01r 2012 3' Shoot grown with dessication 42bp            
whvd_16015_a01r 2012 3' Shoot grown with dessication 99bp Contig11955       fructose-1,6-bisphosphatase,cytosolic,putative,expressed[Triticumaestivum] 72 6.13036e-11
whvd_18015_a01r 2012 3' Shoot grown with dessication 290bp       predictedprotein[Populustrichocarpa] 36 3.83562
whvd_19015_a01r 2012 3' Shoot grown with dessication 168bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 57 1.21109e-06
whvd_3015_a01r 2012 3' Shoot grown with dessication 608bp Contig11523       vacuolarH+-ATPase16kDaproteolipidsubunitc[Aeluropuslittoralis] 245 5.25538e-63
whvd_8015_a01r 2012 3' Shoot grown with dessication 547bp Contig7266       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 4.53724e-48
whvd_9015_a01r 2012 3' Shoot grown with dessication 55bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 41 0.111573
whvd_10015_a02r 2012 3' Shoot grown with dessication 678bp Contig30086       putativehistoneacetyltransferaseELP3[Hordeumvulgare] 396 2.38951e-108
whvd_1015_a02r 2012 3' Shoot grown with dessication 579bp Contig1683       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.38209e-74
whvd_11015_a02r 2012 3' Shoot grown with dessication 480bp Contig6899       morphogenesisprotein[Leymussecalinus] 238 4.95812e-61
whvd_12015_a02r 2012 3' Shoot grown with dessication 578bp Contig2244       S-adenosylmethioninesynthetase2[Triticummonococcum] 316 2.1135e-84
whvd_14015_a02r 2012 3' Shoot grown with dessication 353bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 105 5.10544e-21
whvd_15015_a02r 2012 3' Shoot grown with dessication 466bp Contig5834       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 136 2.7136e-30
whvd_17015_a02r 2012 3' Shoot grown with dessication 276bp Contig6460       PREDICTED:phosphoethanolamineN-methyltransferase1-like[Brachypodiumdistachyon] 87 1.86006e-15
whvd_3015_a02r 2012 3' Shoot grown with dessication 87bp            
whvd_4015_a02r 2012 3' Shoot grown with dessication 229bp Contig20503       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 86 4.21884e-15
whvd_5015_a02r 2012 3' Shoot grown with dessication 455bp Contig22239       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 5.71035e-65
whvd_7015_a02r 2012 3' Shoot grown with dessication 514bp Contig14117       serinehydroxymethyltransferase[Triticummonococcum] 210 1.50358e-52
whvd_8015_a02r 2012 3' Shoot grown with dessication 614bp Contig6895       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 399 3.82345e-109
whvd_9015_a02r 2012 3' Shoot grown with dessication 703bp Contig13223       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.16748e-98
whvd_1016_a03r 2012 3' Shoot grown with dessication 242bp Contig35491       ChainK,ImprovedModelOfPlantPhotosystemI 73 2.78217e-11
whvd_11016_a03r 2012 3' Shoot grown with dessication 503bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.84347e-13
whvd_12016_a03r 2012 3' Shoot grown with dessication 70bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 52 3.62542e-05
whvd_13016_a03r 2012 3' Shoot grown with dessication 280bp Contig7587       shoot1protein[Loliumperenne] 130 2.48456e-28
whvd_15016_a03r 2012 3' Shoot grown with dessication 699bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 7.87778e-89
whvd_17016_a03r 2012 3' Shoot grown with dessication 620bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 235 9.8223e-60
whvd_18016_a03r 2012 3' Shoot grown with dessication 692bp Contig7267       PREDICTED:preproteintranslocasesubunitsecY,chloroplastic-like[Brachypodiumdistachyon] 251 1.31128e-64
whvd_19016_a03r 2012 3' Shoot grown with dessication 399bp       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 189 3.53689e-46
whvd_5016_a03r 2012 3' Shoot grown with dessication 679bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.42411e-94
whvd_7016_a03r 2012 3' Shoot grown with dessication 543bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 256 2.84221e-66
whvd_8016_a03r 2012 3' Shoot grown with dessication 692bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.54897e-65
whvd_9016_a03r 2012 3' Shoot grown with dessication 697bp       predictedprotein[Nematostellavectensis] 42 0.123392
whvd_1016_a04r 2012 3' Shoot grown with dessication 321bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 6.81433e-13
whvd_11016_a04r 2012 3' Shoot grown with dessication 555bp Contig2567       cobalamin-independentmethioninesynthase[Triticummonococcum] 256 2.29854e-66
whvd_12016_a04r 2012 3' Shoot grown with dessication 631bp Contig13085       aminoacidselectivechannelprotein[Hordeumvulgaresubsp.vulgare] 283 3.26046e-74
whvd_13016_a04r 2012 3' Shoot grown with dessication 462bp Contig24981       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 2.30345e-58
whvd_15016_a04r 2012 3' Shoot grown with dessication 653bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.88583e-83
whvd_16016_a04r 2012 3' Shoot grown with dessication 699bp Contig7269       AlNc14C23G2375[AlbugolaibachiiNc14] 37 5.18417
whvd_17016_a04r 2012 3' Shoot grown with dessication 567bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 205 8.50668e-51
whvd_18016_a04r 2012 3' Shoot grown with dessication 281bp Contig12395            
whvd_20016_a04r 2012 3' Shoot grown with dessication 597bp Contig4571       glutathione-S-transferase19E50[Triticumaestivum] 306 3.14697e-81
whvd_2016_a04r 2012 3' Shoot grown with dessication 56bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 42 0.0293613
whvd_4016_a04r 2012 3' Shoot grown with dessication 684bp       phosphoethanolaminemethyltransferase[Triticumaestivum] 270 2.66981e-70
whvd_5016_a04r 2012 3' Shoot grown with dessication 170bp Contig7268            
whvd_6016_a04r 2012 3' Shoot grown with dessication 671bp Contig3784       PREDICTED:hypotheticalprotein[Rattusnorvegicus] 51 0.000240731
whvd_7016_a04r 2012 3' Shoot grown with dessication 386bp       translationally-controlledtumorprotein[Triticumaestivum] 185 6.55877e-45
whvd_10031_a05r 2012 3' Shoot grown with dessication 131bp Contig2610            
whvd_11031_a05r 2012 3' Shoot grown with dessication 564bp Contig7475       type1nonspecificlipidtransferproteinprecursor[Triticumaestivum] 222 6.63602e-56
whvd_12031_a05r 2012 3' Shoot grown with dessication 707bp       PREDICTED:ATP-dependentDNAhelicaseQ-like2-like[Brachypodiumdistachyon] 378 1.2777e-102
whvd_13031_a05r 2012 3' Shoot grown with dessication 681bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 2.64079e-70
whvd_14031_a05r 2012 3' Shoot grown with dessication 704bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 358 1.35445e-96
whvd_16031_a05r 2012 3' Shoot grown with dessication 260bp Contig33337       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 2.2207e-40
whvd_17031_a05r 2012 3' Shoot grown with dessication 335bp Contig20206       PREDICTED:metallothionein-likeproteintype2-likeisoform1[Brachypodiumdistachyon] 56 2.68825e-06
whvd_18031_a05r 2012 3' Shoot grown with dessication 348bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 137 1.21705e-30
whvd_20031_a05r 2012 3' Shoot grown with dessication 632bp Contig1979       cyclophilinA-1[Triticumaestivum] 301 1.51103e-79
whvd_2031_a05r 2012 3' Shoot grown with dessication 310bp Contig7370       hypotheticalproteinSORBIDRAFT_07g026250[Sorghumbicolor] 38 0.983944
whvd_3031_a05r 2012 3' Shoot grown with dessication 663bp Contig36896       PREDICTED:ras-relatedproteinRIC2-like[Brachypodiumdistachyon] 314 1.51436e-83
whvd_4031_a05r 2012 3' Shoot grown with dessication 481bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 167 1.32781e-58
whvd_6031_a05r 2012 3' Shoot grown with dessication 501bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Cynosuruscristatus] 340 1.21368e-91
whvd_7031_a05r 2012 3' Shoot grown with dessication 567bp Contig20503       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 203 2.7106e-69
whvd_8031_a05r 2012 3' Shoot grown with dessication 692bp Contig16576       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 367 2.14144e-99
whvd_1031_a06r 2012 3' Shoot grown with dessication 675bp Contig5834       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 304 2.10793e-80
whvd_11031_a06r 2012 3' Shoot grown with dessication 663bp Contig19363       2-oxoisovaleratedehydrogenase[Triticumaestivum] 319 3.60443e-85
whvd_12031_a06r 2012 3' Shoot grown with dessication 617bp Contig25641       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 5.83548e-81
whvd_14031_a06r 2012 3' Shoot grown with dessication 500bp Contig6519       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 214 7.69066e-54
whvd_16031_a06r 2012 3' Shoot grown with dessication 35bp            
whvd_18031_a06r 2012 3' Shoot grown with dessication 568bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 273 2.55565e-71
whvd_3031_a06r 2012 3' Shoot grown with dessication 580bp Contig11565       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.86323e-66
whvd_4031_a06r 2012 3' Shoot grown with dessication 707bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 8.93082e-72
whvd_5031_a06r 2012 3' Shoot grown with dessication 581bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 1.39638e-75
whvd_6031_a06r 2012 3' Shoot grown with dessication 550bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.90399e-73
whvd_10032_a07r 2012 3' Shoot grown with dessication 365bp Contig5531       non-specificlipidtransferprotein1precursor[Triticumaestivum] 73 2.11675e-11
whvd_12032_a07r 2012 3' Shoot grown with dessication 555bp Contig11578       RecName:Full=Nitratereductase[NADH];Short=NR 181 9.39711e-44
whvd_13032_a07r 2012 3' Shoot grown with dessication 412bp Contig9275       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 124 1.36889e-26
whvd_14032_a07r 2012 3' Shoot grown with dessication 39bp            
whvd_16032_a07r 2012 3' Shoot grown with dessication 716bp Contig7270       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.95649e-66
whvd_17032_a07r 2012 3' Shoot grown with dessication 423bp       PREDICTED:chloridechannelproteinCLC-e-like[Brachypodiumdistachyon] 244 9.25792e-63
whvd_18032_a07r 2012 3' Shoot grown with dessication 600bp Contig3282       RecName:Full=Cytochromeb6-fcomplexiron-sulfursubunit,chloroplastic;AltName:Full=Plastohydroquinone:plastocyaninoxidoreductaseiron-sulfurprotein;AltName:Full=Rieskeiron-sulfurprotein;Short=ISP;Short=RISP;Flags:Precursor 327 1.71459e-87
whvd_2032_a07r 2012 3' Shoot grown with dessication 579bp       PREDICTED:UBXdomain-containingprotein7-like[Brachypodiumdistachyon] 294 1.12328e-77
whvd_3032_a07r 2012 3' Shoot grown with dessication 239bp       cellulosesynthase,expressed[Triticumaestivum] 119 3.39684e-25
whvd_4032_a07r 2012 3' Shoot grown with dessication 677bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.09483e-92
whvd_5032_a07r 2012 3' Shoot grown with dessication 745bp Contig7271       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 1.92726e-67
whvd_6032_a07r 2012 3' Shoot grown with dessication 588bp       ATPbindingprotein[Triticumaestivum] 361 1.04347e-97
whvd_7032_a07r 2012 3' Shoot grown with dessication 661bp Contig6652       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.95482e-83
whvd_9032_a07r 2012 3' Shoot grown with dessication 605bp Contig6518       phosphoethanolaminemethyltransferase[Triticumaestivum] 272 6.74713e-71
whvd_1032_a08r 2012 3' Shoot grown with dessication 384bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 164 1.19807e-38
whvd_11032_a08r 2012 3' Shoot grown with dessication 448bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 5.76026e-65
whvd_13032_a08r 2012 3' Shoot grown with dessication 618bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 319 2.99007e-85
whvd_14032_a08r 2012 3' Shoot grown with dessication 482bp Contig1902       chloroplastfructose-bisphosphatealdolase[Triticumaestivum] 215 4.49484e-54
whvd_15032_a08r 2012 3' Shoot grown with dessication 391bp Contig5531       non-specificlipidtransferprotein1precursor[Triticumaestivum] 94 1.51037e-17
whvd_16032_a08r 2012 3' Shoot grown with dessication 450bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.59846e-33
whvd_20032_a08r 2012 3' Shoot grown with dessication 687bp Contig3985       70kDaheatshockprotein[Triticumaestivum] 353 2.398e-95
whvd_2032_a08r 2012 3' Shoot grown with dessication 233bp Contig6460       unnamedproteinproduct[Streptomycesscabiei87.22] 37 1.7092
whvd_3032_a08r 2012 3' Shoot grown with dessication 39bp            
whvd_5032_a08r 2012 3' Shoot grown with dessication 734bp       PREDICTED:uncharacterizedproteinLOC100822046[Brachypodiumdistachyon] 372 7.54088e-101
whvd_7032_a08r 2012 3' Shoot grown with dessication 679bp Contig28015       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 288 1.2104e-75
whvd_8032_a08r 2012 3' Shoot grown with dessication 583bp Contig18487       RecName:Full=Non-specificlipid-transferprotein4.3;Short=LTP4.3;Flags:Precursor 207 1.42957e-51
whvd_9032_a08r 2012 3' Shoot grown with dessication 231bp Contig6518       PREDICTED:phosphoethanolamineN-methyltransferase1-like[Brachypodiumdistachyon] 94 9.05159e-18
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