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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5004
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whrd_10015_a01f 2012 5' Root of dessiccated seed 616bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 289 5.57251e-76
whrd_1015_a01f 2012 5' Root of dessiccated seed 579bp Contig8043       RecName:Full=Phosphoglyceratekinase,cytosolic 339 2.33133e-91
whrd_11015_a01f 2012 5' Root of dessiccated seed 411bp       hypotheticalproteinTTHERM_00565640[Tetrahymenathermophila] 44 0.0180778
whrd_14015_a01f 2012 5' Root of dessiccated seed 565bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 391 4.93016e-107
whrd_15015_a01f 2012 5' Root of dessiccated seed 158bp Contig29941            
whrd_16015_a01f 2012 5' Root of dessiccated seed 567bp Contig6987       dehydrin[Triticumdurum] 253 2.07975e-75
whrd_17015_a01f 2012 5' Root of dessiccated seed 201bp       beta-glucosidase[Hordeumvulgaresubsp.vulgare] 135 6.01248e-30
whrd_19015_a01f 2012 5' Root of dessiccated seed 583bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 1.23793e-87
whrd_20015_a01f 2012 5' Root of dessiccated seed 298bp       pathogenesis-relatedprotein[Triticumaestivum] 145 7.60202e-33
whrd_2015_a01f 2012 5' Root of dessiccated seed 591bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.87547e-86
whrd_3015_a01f 2012 5' Root of dessiccated seed 567bp Contig13951       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 353 1.94323e-95
whrd_4015_a01f 2012 5' Root of dessiccated seed 549bp Contig30497       wali3[Triticumaestivum] 183 1.85704e-44
whrd_5015_a01f 2012 5' Root of dessiccated seed 641bp Contig975       predictedprotein[Hordeumvulgaresubsp.vulgare] 440 1.65962e-121
whrd_6015_a01f 2012 5' Root of dessiccated seed 557bp       PREDICTED:riboflavinbiosynthesisproteinribBA,chloroplastic-like[Brachypodiumdistachyon] 354 8.25546e-96
whrd_7015_a01f 2012 5' Root of dessiccated seed 666bp       PREDICTED:probableLRRreceptor-likeserine/threonine-proteinkinaseAt1g06840-like[Brachypodiumdistachyon] 402 5.5865e-110
whrd_10015_a02f 2012 5' Root of dessiccated seed 454bp Contig5683       gamma-TIP-likeprotein[Hordeumvulgaresubsp.vulgare] 233 1.60925e-59
whrd_1015_a02f 2012 5' Root of dessiccated seed 59bp            
whrd_12015_a02f 2012 5' Root of dessiccated seed 419bp Contig32671       coronatineinsensitive1-likeprotein[Triticumaestivum] 107 1.77373e-21
whrd_13015_a02f 2012 5' Root of dessiccated seed 280bp Contig1060       ES1A[Hordeumvulgare] 42 0.0400863
whrd_15015_a02f 2012 5' Root of dessiccated seed 574bp Contig30558       phosphoinositide-specificphospholipaseC2[Triticumaestivum] 406 1.99381e-111
whrd_16015_a02f 2012 5' Root of dessiccated seed 499bp Contig4743       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.58401e-33
whrd_17015_a02f 2012 5' Root of dessiccated seed 590bp       LEA2protein[Triticumaestivum] 332 5.1907e-89
whrd_19015_a02f 2012 5' Root of dessiccated seed 655bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 3.36939e-80
whrd_20015_a02f 2012 5' Root of dessiccated seed 599bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 3.80203e-103
whrd_4015_a02f 2012 5' Root of dessiccated seed 659bp Contig14586       bluecopperprotein[Triticumaestivum] 331 1.52713e-88
whrd_6015_a02f 2012 5' Root of dessiccated seed 586bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 4.83424e-108
whrd_7015_a02f 2012 5' Root of dessiccated seed 674bp Contig11868       PREDICTED:ferredoxin-dependentglutamatesynthase,chloroplastic-like[Brachypodiumdistachyon] 441 8.36436e-122
whrd_8015_a02f 2012 5' Root of dessiccated seed 632bp Contig29847       germin-likeprotein[Triticumaestivum] 403 2.82337e-110
whrd_9015_a02f 2012 5' Root of dessiccated seed 655bp       Shaggy-likekinase[Triticumaestivum] 341 1.44058e-91
whrd_1016_a03f 2012 5' Root of dessiccated seed 654bp Contig11550       hypotheticalprotein[Aegilopstauschii] 254 1.35776e-65
whrd_11016_a03f 2012 5' Root of dessiccated seed 528bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 321 8.43722e-86
whrd_13016_a03f 2012 5' Root of dessiccated seed 576bp Contig23388       predictedprotein[Hordeumvulgaresubsp.vulgare] 378 5.81458e-103
whrd_14016_a03f 2012 5' Root of dessiccated seed 651bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 5.17145e-57
whrd_16016_a03f 2012 5' Root of dessiccated seed 598bp Contig28638       predictedprotein[Hordeumvulgaresubsp.vulgare] 433 2.21865e-119
whrd_17016_a03f 2012 5' Root of dessiccated seed 677bp Contig31936       bluecopper-bindingproteinhomolog[Triticumaestivum] 335 6.53751e-90
whrd_19016_a03f 2012 5' Root of dessiccated seed 645bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 392 5.31597e-107
whrd_20016_a03f 2012 5' Root of dessiccated seed 628bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 415 7.21435e-114
whrd_2016_a03f 2012 5' Root of dessiccated seed 626bp Contig10561       smallGTP-bindingprotein[Triticumaestivum] 388 7.13469e-106
whrd_3016_a03f 2012 5' Root of dessiccated seed 637bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 4.21489e-85
whrd_5016_a03f 2012 5' Root of dessiccated seed 435bp Contig670       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.01818e-21
whrd_6016_a03f 2012 5' Root of dessiccated seed 563bp Contig5133       glutathione-S-transferase28e45[Triticumaestivum] 339 2.18363e-91
whrd_7016_a03f 2012 5' Root of dessiccated seed 624bp Contig4572       PREDICTED:26SproteaseregulatorysubunitS10BhomologB-like[Brachypodiumdistachyon] 287 2.2083e-75
whrd_8016_a03f 2012 5' Root of dessiccated seed 103bp Contig15223       excisionrepaircross-complementingrodentrepairdeficiency,complementationgroup6-like[Bostaurus] 39 0.575116
whrd_9016_a03f 2012 5' Root of dessiccated seed 495bp       PREDICTED:uncharacterizedproteinLOC100829450[Brachypodiumdistachyon] 99 2.77361e-19
whrd_1016_a04f 2012 5' Root of dessiccated seed 651bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 8.81522e-17
whrd_11016_a04f 2012 5' Root of dessiccated seed 432bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 284 1.0411e-74
whrd_12016_a04f 2012 5' Root of dessiccated seed 309bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 3.25725e-28
whrd_13016_a04f 2012 5' Root of dessiccated seed 204bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.9278e-28
whrd_14016_a04f 2012 5' Root of dessiccated seed 263bp Contig29147       P-typeATPase[Hordeumvulgare] 116 2.90365e-24
whrd_15016_a04f 2012 5' Root of dessiccated seed 588bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 5.27402e-94
whrd_16016_a04f 2012 5' Root of dessiccated seed 562bp Contig34655       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 2.74952e-102
whrd_18016_a04f 2012 5' Root of dessiccated seed 629bp       PREDICTED:uncharacterizedproteinLOC100841807[Brachypodiumdistachyon] 337 1.91177e-90
whrd_19016_a04f 2012 5' Root of dessiccated seed 526bp Contig8522       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 1.54119e-79
whrd_20016_a04f 2012 5' Root of dessiccated seed 592bp       PREDICTED:uncharacterizedproteinLOC100834200[Brachypodiumdistachyon] 238 1.0201e-60
whrd_2016_a04f 2012 5' Root of dessiccated seed 559bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 371 6.52604e-101
whrd_3016_a04f 2012 5' Root of dessiccated seed 350bp Contig33195       rCG22866,isoformCRA_a[Rattusnorvegicus] 41 0.0908882
whrd_4016_a04f 2012 5' Root of dessiccated seed 403bp Contig37013       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 1.23136e-59
whrd_5016_a04f 2012 5' Root of dessiccated seed 602bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 1.24477e-93
whrd_6016_a04f 2012 5' Root of dessiccated seed 102bp       phenylalanineammonia-lyase[Triticumaestivum] 70 1.78366e-10
whrd_7016_a04f 2012 5' Root of dessiccated seed 540bp       UDP-N-acetylglucosamine2-epimerase[Thiorhodovibriosp.970] 37 1.55635
whrd_8016_a04f 2012 5' Root of dessiccated seed 615bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 7.31373e-108
whrd_9016_a04f 2012 5' Root of dessiccated seed 579bp Contig8159       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.66688e-97
whrd_12031_a05f 2012 5' Root of dessiccated seed 633bp Contig4744       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.32066e-83
whrd_13031_a05f 2012 5' Root of dessiccated seed 528bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 321 8.43722e-86
whrd_14031_a05f 2012 5' Root of dessiccated seed 610bp Contig14718       PREDICTED:uncharacterizedproteinLOC100846510[Brachypodiumdistachyon] 235 7.10286e-60
whrd_15031_a05f 2012 5' Root of dessiccated seed 505bp Contig25160       PREDICTED:arginyl-tRNAsynthetase,cytoplasmic-like[Brachypodiumdistachyon] 310 1.33876e-82
whrd_16031_a05f 2012 5' Root of dessiccated seed 520bp Contig4745       NACtranscriptionfactor[Hordeumvulgaresubsp.vulgare] 184 1.17652e-44
whrd_17031_a05f 2012 5' Root of dessiccated seed 553bp Contig25613       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 2.1315e-96
whrd_19031_a05f 2012 5' Root of dessiccated seed 641bp Contig18084       PREDICTED:fructose-1,6-bisphosphatase,cytosolic-like[Brachypodiumdistachyon] 365 5.19511e-99
whrd_20031_a05f 2012 5' Root of dessiccated seed 276bp Contig11915       glutamatedecarboxylase,putative,expressed[Triticumaestivum] 170 2.18199e-40
whrd_2031_a05f 2012 5' Root of dessiccated seed 208bp Contig32528            
whrd_3031_a05f 2012 5' Root of dessiccated seed 548bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 1.17464e-59
whrd_4031_a05f 2012 5' Root of dessiccated seed 639bp Contig4162       predictedprotein[Hordeumvulgaresubsp.vulgare] 436 2.36576e-120
whrd_6031_a05f 2012 5' Root of dessiccated seed 496bp Contig20719       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.37016e-34
whrd_7031_a05f 2012 5' Root of dessiccated seed 588bp Contig142       60SribosomalproteinL5[Triticumaestivum] 366 1.87146e-99
whrd_8031_a05f 2012 5' Root of dessiccated seed 618bp       GTPaseSAR1[Triticumaestivum] 367 1.65611e-99
whrd_9031_a05f 2012 5' Root of dessiccated seed 578bp Contig4746       predictedprotein[Hordeumvulgaresubsp.vulgare] 166 3.53254e-39
whrd_10031_a06f 2012 5' Root of dessiccated seed 501bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.88853e-54
whrd_13031_a06f 2012 5' Root of dessiccated seed 529bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 334 7.54184e-90
whrd_15031_a06f 2012 5' Root of dessiccated seed 559bp Contig29598       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 4.37026e-52
whrd_16031_a06f 2012 5' Root of dessiccated seed 555bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 372 2.87414e-101
whrd_18031_a06f 2012 5' Root of dessiccated seed 197bp Contig4289            
whrd_19031_a06f 2012 5' Root of dessiccated seed 620bp Contig17521       PREDICTED:uncharacterizedproteinLOC100822237[Brachypodiumdistachyon] 409 2.90979e-112
whrd_20031_a06f 2012 5' Root of dessiccated seed 464bp       UDP-D-glucoseepimerase1[Hordeumvulgare] 228 6.88315e-58
whrd_2031_a06f 2012 5' Root of dessiccated seed 583bp       PREDICTED:uncharacterizedproteinLOC100840372[Brachypodiumdistachyon] 136 5.28613e-30
whrd_3031_a06f 2012 5' Root of dessiccated seed 92bp Contig14447       hypotheticalproteinCC1G_06473[Coprinopsiscinereaokayama7#130] 33 0.00223045
whrd_4031_a06f 2012 5' Root of dessiccated seed 142bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 99 4.69576e-19
whrd_5031_a06f 2012 5' Root of dessiccated seed 532bp Contig1509       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.26553e-94
whrd_6031_a06f 2012 5' Root of dessiccated seed 36bp            
whrd_7031_a06f 2012 5' Root of dessiccated seed 603bp Contig10227       RecName:Full=Mitochondrialoutermembraneporin;AltName:Full=Voltage-dependentanion-selectivechannelprotein;Short=VDAC 363 1.67846e-98
whrd_8031_a06f 2012 5' Root of dessiccated seed 568bp       GTPaseSAR1[Triticumaestivum] 329 3.00493e-88
whrd_9031_a06f 2012 5' Root of dessiccated seed 588bp Contig5095       PREDICTED:sucrosesynthase1-like[Brachypodiumdistachyon] 396 2.20557e-108
whrd_10032_a07f 2012 5' Root of dessiccated seed 659bp            
whrd_11032_a07f 2012 5' Root of dessiccated seed 601bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 2.37492e-52
whrd_12032_a07f 2012 5' Root of dessiccated seed 548bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 4.88953e-90
whrd_13032_a07f 2012 5' Root of dessiccated seed 564bp Contig24803       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 9.03147e-29
whrd_14032_a07f 2012 5' Root of dessiccated seed 589bp Contig4747            
whrd_16032_a07f 2012 5' Root of dessiccated seed 646bp Contig6008       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 381 1.22553e-103
whrd_18032_a07f 2012 5' Root of dessiccated seed 433bp       PREDICTED:polygalacturonasenon-catalyticsubunitAroGP3-like[Brachypodiumdistachyon] 101 1.24994e-19
whrd_19032_a07f 2012 5' Root of dessiccated seed 538bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 1.15895e-96
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