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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5044
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whh_24002_a01f 2012 5' Spike at heading date 535bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 231 9.39158e-59
whh_25002_a01f 2012 5' Spike at heading date 455bp Contig1589       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.71934e-61
whh_5001_a01f 2012 5' Spike at heading date 523bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 56 3.78807e-06
whh_11001_a01f 2012 5' Spike at heading date 395bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 5.11615e-53
whh_14001_a01f 2012 5' Spike at heading date 486bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 5.47466e-39
whh_19001_a01f 2012 5' Spike at heading date 511bp Contig560       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 130 2.53148e-28
whh_20002_a01f 2012 5' Spike at heading date 403bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 143 1.6972e-32
whh_21001_a01f 2012 5' Spike at heading date 488bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.05186e-82
whh_22001_a01f 2012 5' Spike at heading date 500bp Contig35391       triosephosphat-isomerase[Triticumaestivum] 308 3.91333e-82
whh_8002_a01f 2012 5' Spike at heading date 539bp Contig8621       uncharacterizedproteinLOC100381281[Zeamays] 335 3.61107e-90
whh_9002_a01f 2012 5' Spike at heading date 553bp Contig14164       ATPsynthasesubunit[Triticumaestivum] 296 3.35307e-78
whh_6001_a01f 2012 5' Spike at heading date 38bp            
whh_25018_a02f 2012 5' Spike at heading date 502bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 322 2.6067e-86
whh_26018_a02f 2012 5' Spike at heading date 525bp       conservedhypotheticalprotein[BurkholderiacenocepaciaPC184] 42 0.0566052
whh_27018_a02f 2012 5' Spike at heading date 300bp       hypotheticalproteinMGG_13140[Magnaportheoryzae70-15] 41 0.153482
whh_5017_a02f 2012 5' Spike at heading date 582bp       DRF1.3[Aegilopstauschii] 362 4.46087e-98
whh_1017_a02f 2012 5' Spike at heading date 447bp Contig1732       PREDICTED:probableF-actin-cappingproteinsubunitbeta-likeisoform1[Brachypodiumdistachyon] 282 3.97987e-74
whh_19017_a02f 2012 5' Spike at heading date 578bp Contig9283       smalluORF[Leymuschinensis] 101 1.82269e-19
whh_20018_a02f 2012 5' Spike at heading date 343bp       hypotheticalproteinPTSG_05257[Salpingoecasp.ATCC50818] 46 0.00284709
whh_2017_a02f 2012 5' Spike at heading date 523bp Contig16782       PREDICTED:probableF-actin-cappingproteinsubunitbeta-likeisoform1[Brachypodiumdistachyon] 330 1.35911e-88
whh_21017_a02f 2012 5' Spike at heading date 408bp       PREDICTED:uncharacterizedproteinLOC100824590[Brachypodiumdistachyon] 167 1.85684e-39
whh_22017_a02f 2012 5' Spike at heading date 570bp       hypotheticalproteinNECHADRAFT_87678[NectriahaematococcampVI77-13-4] 37 3.12274
whh_23018_a02f 2012 5' Spike at heading date 459bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 82 5.93973e-14
whh_3017_a02f 2012 5' Spike at heading date 571bp Contig1619       predictedprotein[MicromonaspusillaCCMP1545] 49 0.000608029
whh_7017_a02f 2012 5' Spike at heading date 532bp Contig18460       PREDICTED:vacuolarproteinsorting-associatedprotein29-like[Brachypodiumdistachyon] 329 3.23903e-88
whh_24034_a03f 2012 5' Spike at heading date 408bp Contig26568       PREDICTED:eukaryotictranslationinitiationfactor6-2-like[Brachypodiumdistachyon] 216 2.66886e-54
whh_25034_a03f 2012 5' Spike at heading date 366bp       salttolerantprotein[Triticumaestivum] 211 6.47873e-53
whh_26034_a03f 2012 5' Spike at heading date 391bp Contig28145       PREDICTED:succinate-semialdehydedehydrogenase,mitochondrial-like[Brachypodiumdistachyon] 249 2.80906e-64
whh_5033_a03f 2012 5' Spike at heading date 530bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 2.23543e-25
whh_11033_a03f 2012 5' Spike at heading date 504bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 2.71101e-38
whh_13033_a03f 2012 5' Spike at heading date 474bp       PREDICTED:rabGDPdissociationinhibitoralpha-like[Brachypodiumdistachyon] 309 1.76708e-82
whh_18034_a03f 2012 5' Spike at heading date 377bp Contig34878       unknown[Medicagotruncatula] 246 2.42618e-63
whh_19033_a03f 2012 5' Spike at heading date 411bp Contig33024       unknown[Medicagotruncatula] 267 1.31298e-69
whh_20034_a03f 2012 5' Spike at heading date 313bp Contig13364       ZIMmotif-containingprotein[Triticumaestivum] 195 4.798e-48
whh_21033_a03f 2012 5' Spike at heading date 493bp       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 116 2.89e-24
whh_22033_a03f 2012 5' Spike at heading date 562bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 3.55031e-78
whh_23034_a03f 2012 5' Spike at heading date 561bp Contig1829       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 2.33301e-93
whh_8034_a03f 2012 5' Spike at heading date 360bp       hypotheticalproteinAURANDRAFT_70981,partial[Aureococcusanophagefferens] 40 0.20014
whh_6033_a03f 2012 5' Spike at heading date 31bp            
whh_7033_a03f 2012 5' Spike at heading date 501bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 1.10592e-05
whh_10049_a04f 2012 5' Spike at heading date 532bp       PREDICTED:probableuridinenucleosidase2-like[Brachypodiumdistachyon] 216 3.0599e-54
whh_1049_a04f 2012 5' Spike at heading date 480bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 3.10519e-79
whh_21049_a04f 2012 5' Spike at heading date 577bp            
whh_3049_a04f 2012 5' Spike at heading date 560bp       Os03g0760800[OryzasativaJaponicaGroup] 175 5.35469e-42
whh_25066_a05f 2012 5' Spike at heading date 224bp       betatubulin8[Hordeumvulgaresubsp.vulgare] 111 7.20376e-23
whh_27066_a05f 2012 5' Spike at heading date 454bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.66918e-48
whh_11065_a05f 2012 5' Spike at heading date 509bp Contig1733       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 8.83817e-90
whh_14065_a05f 2012 5' Spike at heading date 503bp       PREDICTED:uncharacterizedproteinLOC100824590[Brachypodiumdistachyon] 154 1.22783e-35
whh_15065_a05f 2012 5' Spike at heading date 432bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 5.14501e-74
whh_17065_a05f 2012 5' Spike at heading date 539bp       Os06g0336200[OryzasativaJaponicaGroup] 162 4.18949e-38
whh_19065_a05f 2012 5' Spike at heading date 59bp            
whh_20066_a05f 2012 5' Spike at heading date 215bp Contig32559       photosystemIIpolypeptide[Triticumaestivum] 66 2.58316e-09
whh_2065_a05f 2012 5' Spike at heading date 527bp       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 324 5.84296e-87
whh_21065_a05f 2012 5' Spike at heading date 359bp Contig4185       predictedprotein[Hordeumvulgaresubsp.vulgare] 175 6.79941e-42
whh_22065_a05f 2012 5' Spike at heading date 602bp       PREDICTED:3-hydroxyacyl-CoAdehydratasePASTICCINO2A-like[Brachypodiumdistachyon] 302 5.99752e-80
whh_23066_a05f 2012 5' Spike at heading date 548bp Contig16190       cysteineprotease[Triticumaestivum] 196 2.71427e-48
whh_3065_a05f 2012 5' Spike at heading date 641bp       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 391 8.84098e-107
whh_7065_a05f 2012 5' Spike at heading date 431bp       PREDICTED:LOWQUALITYPROTEIN:DNA-bindingproteinRHL1-like[Brachypodiumdistachyon] 170 2.19106e-40
whh_24082_a06f 2012 5' Spike at heading date 606bp Contig560       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 344 1.06973e-92
whh_25082_a06f 2012 5' Spike at heading date 389bp Contig8126       UDP-D-xyloseepimerase3[Hordeumvulgare] 259 2.72549e-67
whh_26082_a06f 2012 5' Spike at heading date 452bp Contig19781       CG11122[Drosophilamelanogaster] 42 0.0528451
whh_27082_a06f 2012 5' Spike at heading date 481bp Contig29523       UDP-D-glucuronatedecarboxylase[Hordeumvulgare] 336 2.28187e-90
whh_1081_a06f 2012 5' Spike at heading date 453bp Contig2705       PREDICTED:GDSLesterase/lipaseAt5g45910-likeisoform1[Brachypodiumdistachyon] 300 1.40612e-79
whh_11081_a06f 2012 5' Spike at heading date 599bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 335 6.29609e-90
whh_13081_a06f 2012 5' Spike at heading date 436bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.84698e-39
whh_18082_a06f 2012 5' Spike at heading date 473bp Contig8991       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 8.0047e-67
whh_20082_a06f 2012 5' Spike at heading date 457bp Contig35283       RecName:Full=Non-specificlipid-transferprotein4.1;Short=LTP4.1;AltName:Full=CW-21;Short=CW21;Flags:Precursor 197 1.27246e-48
whh_21081_a06f 2012 5' Spike at heading date 434bp       Os03g0163400[OryzasativaJaponicaGroup] 145 4.40631e-33
whh_23082_a06f 2012 5' Spike at heading date 549bp Contig16190       cysteineprotease[Triticumaestivum] 202 5.04549e-50
whh_6081_a06f 2012 5' Spike at heading date 566bp Contig10344       PREDICTED:uncharacterizedproteinLOC100821088[Brachypodiumdistachyon] 272 5.6934e-71
whh_25002_a07f 2012 5' Spike at heading date 452bp Contig1734       PREDICTED:ERlumenproteinretainingreceptor-like[Brachypodiumdistachyon] 178 4.72453e-43
whh_27002_a07f 2012 5' Spike at heading date 490bp       uncharacterizedproteinLOC100272618[Zeamays] 281 8.85969e-74
whh_5001_a07f 2012 5' Spike at heading date 604bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 2.37208e-108
whh_11001_a07f 2012 5' Spike at heading date 441bp Contig3455       RecName:Full=60SribosomalproteinL30 224 7.60592e-57
whh_13001_a07f 2012 5' Spike at heading date 421bp Contig6825       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 9.23648e-71
whh_14001_a07f 2012 5' Spike at heading date 399bp Contig1827       RecName:Full=S-adenosylmethioninesynthase3;Short=AdoMetsynthase3;AltName:Full=Methionineadenosyltransferase3;Short=MAT3 248 6.4159e-64
whh_17001_a07f 2012 5' Spike at heading date 469bp       PREDICTED:proteasomesubunitalphatype-2-like[Brachypodiumdistachyon] 297 1.20125e-78
whh_18002_a07f 2012 5' Spike at heading date 338bp       sucrosephosphatesynthaseII[Aegilopstauschii] 222 3.68528e-56
whh_21001_a07f 2012 5' Spike at heading date 534bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.4607e-72
whh_23002_a07f 2012 5' Spike at heading date 420bp       MYB-relatedprotein[Aegilopsspeltoides] 59 3.23398e-07
whh_3001_a07f 2012 5' Spike at heading date 532bp Contig9097       cyclophilin3[Dasypyrumvillosum] 315 4.8401e-84
whh_4001_a07f 2012 5' Spike at heading date 574bp Contig6846       PREDICTED:uncharacterizedproteinLOC100825330[Brachypodiumdistachyon] 286 2.30248e-75
whh_8002_a07f 2012 5' Spike at heading date 534bp Contig29687       PREDICTED:GDSLesterase/lipaseAt4g10955-like[Brachypodiumdistachyon] 261 6.35075e-68
whh_9001_a07f 2012 5' Spike at heading date 354bp       roothairdefective3GTP-bindingprotein[Triticumaestivum] 91 9.96387e-17
whh_6001_a07f 2012 5' Spike at heading date 549bp       RecName:Full=Cytochromeb6-fcomplexiron-sulfursubunit,chloroplastic;AltName:Full=Plastohydroquinone:plastocyaninoxidoreductaseiron-sulfurprotein;AltName:Full=Rieskeiron-sulfurprotein;Short=ISP;Short=RISP;Flags:Precursor 292 3.63456e-77
whh_24018_a08f 2012 5' Spike at heading date 481bp       hypotheticalproteinCOPCOM_01000[CoprococcuscomesATCC27758] 42 0.0684161
whh_25018_a08f 2012 5' Spike at heading date 517bp Contig30408       predictedprotein[Populustrichocarpa] 37 2.27829
whh_11017_a08f 2012 5' Spike at heading date 374bp Contig35299       Cellwall-associatedhydrolase,partial[Medicagotruncatula] 67 2.85241e-26
whh_15017_a08f 2012 5' Spike at heading date 450bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.3651e-66
whh_16017_a08f 2012 5' Spike at heading date 503bp Contig36758       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 1.93317e-81
whh_17017_a08f 2012 5' Spike at heading date 494bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 144 1.28834e-32
whh_18018_a08f 2012 5' Spike at heading date 106bp       PREDICTED:UDP-arabinopyranosemutase1-like[Brachypodiumdistachyon] 74 1.2808e-11
whh_19017_a08f 2012 5' Spike at heading date 126bp Contig28420       PREDICTED:uncharacterizedproteinLOC100844592[Brachypodiumdistachyon] 70 2.36483e-10
whh_20018_a08f 2012 5' Spike at heading date 482bp Contig6207       unknown[Lotusjaponicus] 229 3.92855e-58
whh_21017_a08f 2012 5' Spike at heading date 417bp Contig1735       PREDICTED:preproteintranslocasesubunitsecY,chloroplastic-like[Brachypodiumdistachyon] 259 2.07888e-67
whh_22017_a08f 2012 5' Spike at heading date 552bp Contig22245       PREDICTED:40SribosomalproteinS9-2-like[Brachypodiumdistachyon] 324 8.97606e-87
whh_23018_a08f 2012 5' Spike at heading date 474bp       PREDICTED:uncharacterizedproteinLOC100821088[Brachypodiumdistachyon] 270 1.55163e-70
whh_6017_a08f 2012 5' Spike at heading date 570bp Contig5573       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 1.1391e-79
whh_12033_a09f 2012 5' Spike at heading date 480bp       RecName:Full=Glucanendo-1,3-beta-glucosidase;AltName:Full=(1- 338 6.03211e-91
whh_27034_a09f 2012 5' Spike at heading date 356bp Contig21755       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28883e-28
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