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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4682
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_1611015_a01r 2012 3' Shoot grown under cold condition for 16days 284bp       PREDICTED:proteinFLUORESCENTINBLUELIGHT,chloroplastic-like[Brachypodiumdistachyon] 69 3.04038e-10
whv_1612015_a01r 2012 3' Shoot grown under cold condition for 16days 529bp Contig2567       cobalamin-independentmethioninesynthase[Triticummonococcum] 229 4.46265e-58
whv_1614015_a01r 2012 3' Shoot grown under cold condition for 16days 645bp Contig36272       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 6.97515e-91
whv_1616015_a01r 2012 3' Shoot grown under cold condition for 16days 196bp Contig32559       predictedprotein[Hordeumvulgaresubsp.vulgare] 137 1.21545e-30
whv_1617015_a01r 2012 3' Shoot grown under cold condition for 16days 558bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 2.12877e-51
whv_1619015_a01r 2012 3' Shoot grown under cold condition for 16days 553bp Contig618       OSIGBa0096P03.8[OryzasativaIndicaGroup] 143 2.12966e-32
whv_1620015_a01r 2012 3' Shoot grown under cold condition for 16days 738bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.30131e-92
whv_166015_a01r 2012 3' Shoot grown under cold condition for 16days 722bp Contig13848       predictedprotein[Hordeumvulgaresubsp.vulgare] 455 6.51995e-126
whv_168015_a01r 2012 3' Shoot grown under cold condition for 16days 669bp Contig19262       chlorophylla/b-bindingproteinWCABprecursor[Triticumaestivum] 434 1.32022e-119
whv_169015_a01r 2012 3' Shoot grown under cold condition for 16days 39bp            
whv_161015_a02r 2012 3' Shoot grown under cold condition for 16days 499bp       adenosinediphosphateglucosepyrophosphatase[Triticumaestivum] 278 4.35683e-73
whv_1612015_a02r 2012 3' Shoot grown under cold condition for 16days 712bp Contig15107       hypotheticalproteinOsI_03457[OryzasativaIndicaGroup] 208 1.35428e-51
whv_1614015_a02r 2012 3' Shoot grown under cold condition for 16days 133bp            
whv_1616015_a02r 2012 3' Shoot grown under cold condition for 16days 626bp Contig17083       ATP/ADPcarrierprotein[Triticumturgidum] 248 8.82329e-64
whv_1617015_a02r 2012 3' Shoot grown under cold condition for 16days 727bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Crithopsisdelileana] 505 7.31461e-141
whv_1620015_a02r 2012 3' Shoot grown under cold condition for 16days 498bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 205 3.57245e-51
whv_163015_a02r 2012 3' Shoot grown under cold condition for 16days 567bp Contig6416       PREDICTED:uncharacterizedproteinAt4g14100-like[Brachypodiumdistachyon] 235 4.50018e-60
whv_166015_a02r 2012 3' Shoot grown under cold condition for 16days 680bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 358 9.5241e-97
whv_161016_a03r 2012 3' Shoot grown under cold condition for 16days 595bp Contig6923       dehydrin[Triticumaestivum] 241 1.22413e-61
whv_1613016_a03r 2012 3' Shoot grown under cold condition for 16days 692bp Contig6499       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 358 7.61645e-97
whv_1616016_a03r 2012 3' Shoot grown under cold condition for 16days 66bp Contig2917       PREDICTED:probablepeptide/nitratetransporterAt3g43790-like[Brachypodiumdistachyon] 38 0.646019
whv_1617016_a03r 2012 3' Shoot grown under cold condition for 16days 152bp            
whv_1618016_a03r 2012 3' Shoot grown under cold condition for 16days 718bp       PREDICTED:DUF21domain-containingproteinAt2g14520-like[Brachypodiumdistachyon] 340 2.9975e-91
whv_1619016_a03r 2012 3' Shoot grown under cold condition for 16days 543bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 4.68443e-53
whv_162016_a03r 2012 3' Shoot grown under cold condition for 16days 517bp       salttolerantprotein[Triticumaestivum] 220 1.89763e-55
whv_166016_a03r 2012 3' Shoot grown under cold condition for 16days 117bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.7901e-13
whv_167016_a03r 2012 3' Shoot grown under cold condition for 16days 636bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.00724e-84
whv_168016_a03r 2012 3' Shoot grown under cold condition for 16days 710bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 347 2.43963e-93
whv_169016_a03r 2012 3' Shoot grown under cold condition for 16days 275bp       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 101 1.24477e-19
whv_1612016_a04r 2012 3' Shoot grown under cold condition for 16days 413bp Contig24198       predictedprotein[Hordeumvulgaresubsp.vulgare] 149 3.0425e-34
whv_1616016_a04r 2012 3' Shoot grown under cold condition for 16days 39bp            
whv_1617016_a04r 2012 3' Shoot grown under cold condition for 16days 67bp            
whv_1619016_a04r 2012 3' Shoot grown under cold condition for 16days 697bp       RecName:Full=GlutathioneS-transferase1;AltName:Full=GSTclass-phi 334 1.20284e-89
whv_162016_a04r 2012 3' Shoot grown under cold condition for 16days 426bp Contig9176       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.13221e-44
whv_163016_a04r 2012 3' Shoot grown under cold condition for 16days 492bp       dehydrin[Triticumdurum] 203 1.79763e-50
whv_164016_a04r 2012 3' Shoot grown under cold condition for 16days 502bp       PREDICTED:diseaseresistanceproteinRPM1-like[Brachypodiumdistachyon] 103 1.90307e-20
whv_166016_a04r 2012 3' Shoot grown under cold condition for 16days 706bp Contig6417       PREDICTED:3-hydroxybutyryl-CoAdehydratase-like[Brachypodiumdistachyon] 380 3.36237e-103
whv_167016_a04r 2012 3' Shoot grown under cold condition for 16days 570bp Contig6527       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 291 9.18676e-77
whv_168016_a04r 2012 3' Shoot grown under cold condition for 16days 744bp Contig7153       RecName:Full=Phosphoribulokinase,chloroplastic;Short=PRK;Short=PRKase;AltName:Full=Phosphopentokinase;Flags:Precursor 363 2.75725e-98
whv_169016_a04r 2012 3' Shoot grown under cold condition for 16days 678bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.40738e-92
whv_1610031_a05r 2012 3' Shoot grown under cold condition for 16days 508bp Contig32100       PREDICTED:cyclin-B1-2-like[Brachypodiumdistachyon] 271 7.06835e-71
whv_1612031_a05r 2012 3' Shoot grown under cold condition for 16days 703bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 4.5404e-68
whv_1613031_a05r 2012 3' Shoot grown under cold condition for 16days 161bp Contig10197       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.43761e-23
whv_1618031_a05r 2012 3' Shoot grown under cold condition for 16days 742bp Contig9874       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.82737e-95
whv_1619031_a05r 2012 3' Shoot grown under cold condition for 16days 757bp Contig11828       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 5.7577e-99
whv_163031_a05r 2012 3' Shoot grown under cold condition for 16days 742bp Contig6499       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 385 6.77562e-105
whv_164031_a05r 2012 3' Shoot grown under cold condition for 16days 696bp Contig5728       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 5.83593e-52
whv_166031_a05r 2012 3' Shoot grown under cold condition for 16days 669bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 6.6452e-87
whv_167031_a05r 2012 3' Shoot grown under cold condition for 16days 673bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.1026e-89
whv_169031_a05r 2012 3' Shoot grown under cold condition for 16days 734bp Contig14137       PREDICTED:bidirectionalsugartransporterSWEET2b-like[Brachypodiumdistachyon] 375 6.82044e-102
whv_1611031_a06r 2012 3' Shoot grown under cold condition for 16days 652bp Contig5453       PREDICTED:E3ubiquitin-proteinligaseSINAT2-like[Brachypodiumdistachyon] 320 1.99026e-85
whv_1612031_a06r 2012 3' Shoot grown under cold condition for 16days 683bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 6.90127e-95
whv_1613031_a06r 2012 3' Shoot grown under cold condition for 16days 694bp Contig17083       ATP/ADPcarrierprotein[Triticumturgidum] 292 8.75485e-77
whv_1614031_a06r 2012 3' Shoot grown under cold condition for 16days 727bp Contig33534       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.76079e-70
whv_1617031_a06r 2012 3' Shoot grown under cold condition for 16days 210bp       beta-glucosidase[Triticumaestivum] 143 2.85513e-32
whv_1618031_a06r 2012 3' Shoot grown under cold condition for 16days 251bp Contig1949       PREDICTED:succinyl-CoAligase[ADP-forming]subunitbeta,mitochondrial-like[Brachypodiumdistachyon] 164 1.18613e-38
whv_1619031_a06r 2012 3' Shoot grown under cold condition for 16days 684bp Contig27645       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 2.17034e-56
whv_162031_a06r 2012 3' Shoot grown under cold condition for 16days 709bp Contig2743       RecName:Full=Phosphoribulokinase,chloroplastic;Short=PRK;Short=PRKase;AltName:Full=Phosphopentokinase;Flags:Precursor 342 7.84801e-92
whv_163031_a06r 2012 3' Shoot grown under cold condition for 16days 668bp Contig16733       group3lateembryogenesisabundantprotein[Triticumaestivum] 345 8.10439e-93
whv_164031_a06r 2012 3' Shoot grown under cold condition for 16days 520bp Contig9624       60SribosomalproteinL5[Triticumaestivum] 224 7.8922e-57
whv_166031_a06r 2012 3' Shoot grown under cold condition for 16days 396bp Contig20093       putativerubiscosmallsubunit[Triticumdurum] 170 2.22954e-40
whv_169031_a06r 2012 3' Shoot grown under cold condition for 16days 267bp Contig6617       hypotheticalproteinMTR_3g035650[Medicagotruncatula] 157 1.12859e-36
whv_161032_a07r 2012 3' Shoot grown under cold condition for 16days 745bp Contig17786       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 3.7779e-79
whv_1613032_a07r 2012 3' Shoot grown under cold condition for 16days 177bp Contig32559       photosystemIIpolypeptide[Triticumaestivum] 73 2.7678e-11
whv_1617032_a07r 2012 3' Shoot grown under cold condition for 16days 583bp Contig1132       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 286 2.42157e-75
whv_1618032_a07r 2012 3' Shoot grown under cold condition for 16days 526bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial(chloroplast)[Glyceriafluitans] 365 2.98697e-99
whv_1620032_a07r 2012 3' Shoot grown under cold condition for 16days 36bp            
whv_163032_a07r 2012 3' Shoot grown under cold condition for 16days 731bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.48687e-96
whv_164032_a07r 2012 3' Shoot grown under cold condition for 16days 691bp Contig7123       predictedprotein[Hordeumvulgaresubsp.vulgare] 331 1.28833e-88
whv_165032_a07r 2012 3' Shoot grown under cold condition for 16days 40bp            
whv_166032_a07r 2012 3' Shoot grown under cold condition for 16days 520bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 246 2.53295e-63
whv_168032_a07r 2012 3' Shoot grown under cold condition for 16days 473bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 141 8.36077e-32
whv_1610032_a08r 2012 3' Shoot grown under cold condition for 16days 720bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 7.69809e-95
whv_161032_a08r 2012 3' Shoot grown under cold condition for 16days 658bp Contig17786       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 1.48602e-67
whv_1612032_a08r 2012 3' Shoot grown under cold condition for 16days 716bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 3.89674e-107
whv_1616032_a08r 2012 3' Shoot grown under cold condition for 16days 477bp Contig5531       non-specificlipidtransferprotein1precursor[Triticumaestivum] 142 4.87965e-32
whv_1617032_a08r 2012 3' Shoot grown under cold condition for 16days 546bp Contig1132       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 268 5.62035e-70
whv_1618032_a08r 2012 3' Shoot grown under cold condition for 16days 37bp            
whv_1619032_a08r 2012 3' Shoot grown under cold condition for 16days 359bp Contig6144       PREDICTED:coiled-coildomain-containingprotein72-like[Brachypodiumdistachyon] 109 4.582e-22
whv_163032_a08r 2012 3' Shoot grown under cold condition for 16days 751bp Contig6518       phosphoethanolaminemethyltransferase[Triticumaestivum] 350 3.21206e-94
whv_164032_a08r 2012 3' Shoot grown under cold condition for 16days 320bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 169 2.89955e-40
whv_165032_a08r 2012 3' Shoot grown under cold condition for 16days 753bp Contig32773       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 8.01933e-77
whv_166032_a08r 2012 3' Shoot grown under cold condition for 16days 763bp       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 305 1.2273e-80
whv_167032_a08r 2012 3' Shoot grown under cold condition for 16days 690bp       smoothelin,likeprotein[Mustelaputoriusfuro] 49 0.00098838
whv_1610047_a09r 2012 3' Shoot grown under cold condition for 16days 743bp       ATPsynthasebetasubunit[Triticumaestivum] 409 5.72262e-112
whv_1611047_a09r 2012 3' Shoot grown under cold condition for 16days 257bp Contig12012       PREDICTED:dihydroneopterinaldolase-like[Brachypodiumdistachyon] 119 4.51103e-25
whv_1612047_a09r 2012 3' Shoot grown under cold condition for 16days 34bp            
whv_1614047_a09r 2012 3' Shoot grown under cold condition for 16days 525bp Contig7723       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 304 1.04305e-80
whv_1615047_a09r 2012 3' Shoot grown under cold condition for 16days 461bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 70 1.39482e-11
whv_1617047_a09r 2012 3' Shoot grown under cold condition for 16days 689bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.3479e-90
whv_1619047_a09r 2012 3' Shoot grown under cold condition for 16days 285bp       coldacclimationproteinWCOR615[Triticumaestivum] 178 6.27191e-43
whv_1620047_a09r 2012 3' Shoot grown under cold condition for 16days 675bp       chlorophylla-bbindingprotein2[Zeamays] 259 7.05751e-90
whv_162047_a09r 2012 3' Shoot grown under cold condition for 16days 643bp Contig5795       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 9.9462e-90
whv_163047_a09r 2012 3' Shoot grown under cold condition for 16days 69bp       conservedhypotheticalprotein[Trichinellaspiralis] 30 0.286255
whv_165047_a09r 2012 3' Shoot grown under cold condition for 16days 730bp Contig2567       cobalamin-independentmethioninesynthase[Triticummonococcum] 380 2.10038e-103
whv_166047_a09r 2012 3' Shoot grown under cold condition for 16days 736bp Contig21219       60SribosomalproteinL5[Triticumaestivum] 392 5.39164e-107
whv_168047_a09r 2012 3' Shoot grown under cold condition for 16days 327bp Contig17203       PREDICTED:50SribosomalproteinL6,chloroplastic-like[Brachypodiumdistachyon] 182 4.27453e-44
whv_169047_a09r 2012 3' Shoot grown under cold condition for 16days 676bp Contig4421       RecName:Full=Acylcarrierprotein3,chloroplastic;AltName:Full=AcylcarrierproteinIII;Short=ACPIII;Flags:Precursor 252 9.39924e-65
whv_1610047_a10r 2012 3' Shoot grown under cold condition for 16days 716bp       ATPsynthasebetasubunit[Triticumaestivum] 396 4.60308e-108
whv_1612047_a10r 2012 3' Shoot grown under cold condition for 16days 126bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 75 7.37379e-12
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