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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4287
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_10015_a01f 2012 5' Shoot grown under cold condition for 3days 540bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 2.5131e-30
whv3_1015_a01f 2012 5' Shoot grown under cold condition for 3days 217bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 2.02579e-30
whv3_12015_a01f 2012 5' Shoot grown under cold condition for 3days 643bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.61136e-98
whv3_14015_a01f 2012 5' Shoot grown under cold condition for 3days 592bp       BLT14.1protein[Hordeumvulgaresubsp.vulgare] 149 6.23194e-34
whv3_15015_a01f 2012 5' Shoot grown under cold condition for 3days 726bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.4374e-98
whv3_16015_a01f 2012 5' Shoot grown under cold condition for 3days 540bp Contig4376       cold-responsiveprotein[Triticumaestivum] 201 8.13846e-50
whv3_18015_a01f 2012 5' Shoot grown under cold condition for 3days 650bp Contig6278       proline-richprotein[Triticumaestivum] 373 1.98105e-101
whv3_2015_a01f 2012 5' Shoot grown under cold condition for 3days 179bp Contig1979       cyclophilin3[Dasypyrumvillosum] 130 1.90178e-28
whv3_4015_a01f 2012 5' Shoot grown under cold condition for 3days 704bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 4.22022e-90
whv3_10015_a02f 2012 5' Shoot grown under cold condition for 3days 668bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 439 4.12386e-121
whv3_1015_a02f 2012 5' Shoot grown under cold condition for 3days 458bp Contig7725       PREDICTED:ribulose-phosphate3-epimerase,chloroplastic-like[Brachypodiumdistachyon] 274 1.06974e-71
whv3_13015_a02f 2012 5' Shoot grown under cold condition for 3days 626bp       phosphoethanolaminemethyltransferase[Triticumaestivum] 188 1.08359e-45
whv3_14015_a02f 2012 5' Shoot grown under cold condition for 3days 732bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.50287e-98
whv3_16015_a02f 2012 5' Shoot grown under cold condition for 3days 779bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 5.14835e-98
whv3_18015_a02f 2012 5' Shoot grown under cold condition for 3days 635bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 4.44474e-87
whv3_20015_a02f 2012 5' Shoot grown under cold condition for 3days 746bp Contig14903       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 2.37182e-73
whv3_2015_a02f 2012 5' Shoot grown under cold condition for 3days 291bp Contig26888       PREDICTED:glyceraldehyde-3-phosphatedehydrogenase,cytosolic-like[Brachypodiumdistachyon] 45 0.00822748
whv3_3015_a02f 2012 5' Shoot grown under cold condition for 3days 510bp       calcium-dependentproteinkinase[Triticumaestivum] 305 3.3663e-81
whv3_4015_a02f 2012 5' Shoot grown under cold condition for 3days 710bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 452 4.12295e-125
whv3_5015_a02f 2012 5' Shoot grown under cold condition for 3days 600bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.67231e-58
whv3_9015_a02f 2012 5' Shoot grown under cold condition for 3days 342bp Contig26249       RecName:Full=GlutathioneS-transferase2;AltName:Full=GSTclass-phi 118 7.46628e-25
whv3_10016_a03f 2012 5' Shoot grown under cold condition for 3days 755bp Contig35067       predictedprotein[Hordeumvulgaresubsp.vulgare] 476 3.95052e-132
whv3_13016_a03f 2012 5' Shoot grown under cold condition for 3days 687bp       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 338 1.37647e-90
whv3_15016_a03f 2012 5' Shoot grown under cold condition for 3days 575bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 227 1.26928e-57
whv3_17016_a03f 2012 5' Shoot grown under cold condition for 3days 627bp Contig425       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 5.36269e-101
whv3_18016_a03f 2012 5' Shoot grown under cold condition for 3days 641bp Contig3164       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 1.86929e-56
whv3_19016_a03f 2012 5' Shoot grown under cold condition for 3days 56bp Contig12886            
whv3_20016_a03f 2012 5' Shoot grown under cold condition for 3days 212bp Contig18019            
whv3_4016_a03f 2012 5' Shoot grown under cold condition for 3days 694bp Contig6688       hypotheticalproteinSORBIDRAFT_05g003340[Sorghumbicolor] 137 3.60423e-30
whv3_5016_a03f 2012 5' Shoot grown under cold condition for 3days 605bp Contig19262       chlorophylla/b-bindingproteinWCABprecursor[Triticumaestivum] 395 4.04615e-108
whv3_7016_a03f 2012 5' Shoot grown under cold condition for 3days 580bp Contig7371       RecName:Full=Phosphoglyceratekinase,chloroplastic;Flags:Precursor 275 5.3996e-72
whv3_8016_a03f 2012 5' Shoot grown under cold condition for 3days 693bp Contig8091       translationinitiationfactor[Triticumaestivum] 232 8.23239e-59
whv3_1016_a04f 2012 5' Shoot grown under cold condition for 3days 458bp Contig2671       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 305 3.31767e-81
whv3_13016_a04f 2012 5' Shoot grown under cold condition for 3days 682bp Contig33417       GTP-bindingprotein[Triticumaestivum] 462 4.73515e-128
whv3_15016_a04f 2012 5' Shoot grown under cold condition for 3days 663bp       PREDICTED:delta-1-pyrroline-5-carboxylatesynthase-like[Brachypodiumdistachyon] 288 8.79517e-76
whv3_16016_a04f 2012 5' Shoot grown under cold condition for 3days 470bp Contig21054       70kDaheatshockprotein[Triticumaestivum] 304 9.78331e-81
whv3_17016_a04f 2012 5' Shoot grown under cold condition for 3days 513bp Contig1082       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 2.27364e-37
whv3_18016_a04f 2012 5' Shoot grown under cold condition for 3days 661bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.66107e-106
whv3_19016_a04f 2012 5' Shoot grown under cold condition for 3days 740bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv3_3016_a04f 2012 5' Shoot grown under cold condition for 3days 737bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 204 2.74506e-50
whv3_5016_a04f 2012 5' Shoot grown under cold condition for 3days 688bp       LEAD-11dehydrin[Triticumaestivum] 267 2.95182e-69
whv3_6016_a04f 2012 5' Shoot grown under cold condition for 3days 690bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_7016_a04f 2012 5' Shoot grown under cold condition for 3days 689bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_8016_a04f 2012 5' Shoot grown under cold condition for 3days 375bp Contig3930       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.01119e-33
whv3_1031_a05f 2012 5' Shoot grown under cold condition for 3days 335bp Contig32703       metallothioneinetype2[Hordeumvulgaresubsp.vulgare] 156 1.90874e-36
whv3_11031_a05f 2012 5' Shoot grown under cold condition for 3days 723bp Contig6540       Mitochondrialprotein,putative[Medicagotruncatula] 138 2.92792e-40
whv3_13031_a05f 2012 5' Shoot grown under cold condition for 3days 610bp Contig1979       cyclophilinA-1[Triticumaestivum] 361 8.58254e-98
whv3_16031_a05f 2012 5' Shoot grown under cold condition for 3days 663bp Contig19884       Unknown(proteinforMGC:35458)[Homosapiens] 404 1.43634e-110
whv3_2031_a05f 2012 5' Shoot grown under cold condition for 3days 646bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.83377e-51
whv3_3031_a05f 2012 5' Shoot grown under cold condition for 3days 532bp Contig33533       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 3.83504e-81
whv3_4031_a05f 2012 5' Shoot grown under cold condition for 3days 694bp Contig890       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 409 4.96627e-112
whv3_5031_a05f 2012 5' Shoot grown under cold condition for 3days 590bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 1.09241e-54
whv3_8031_a05f 2012 5' Shoot grown under cold condition for 3days 568bp Contig7237       chopperchaperone[Hordeumvulgaresubsp.vulgare] 188 8.23939e-46
whv3_10031_a06f 2012 5' Shoot grown under cold condition for 3days 612bp Contig15635       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 1.31348e-61
whv3_1031_a06f 2012 5' Shoot grown under cold condition for 3days 384bp       RecName:Full=Saltstress-inducedhydrophobicpeptideESI3 81 7.85127e-14
whv3_11031_a06f 2012 5' Shoot grown under cold condition for 3days 669bp Contig6841       PREDICTED:thiazolebiosyntheticenzyme1-2,chloroplastic-like[Brachypodiumdistachyon] 416 3.73853e-114
whv3_12031_a06f 2012 5' Shoot grown under cold condition for 3days 694bp Contig11275       cyclophilinA-2[Triticumaestivum] 361 1.18755e-97
whv3_13031_a06f 2012 5' Shoot grown under cold condition for 3days 664bp Contig10708            
whv3_15031_a06f 2012 5' Shoot grown under cold condition for 3days 480bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 6.24226e-88
whv3_16031_a06f 2012 5' Shoot grown under cold condition for 3days 698bp Contig6689       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 9.29564e-58
whv3_17031_a06f 2012 5' Shoot grown under cold condition for 3days 683bp       GCN2-typeproteinkinase[Triticumaestivum] 338 1.03126e-90
whv3_20031_a06f 2012 5' Shoot grown under cold condition for 3days 764bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whv3_2031_a06f 2012 5' Shoot grown under cold condition for 3days 686bp Contig2173       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.01595e-118
whv3_4031_a06f 2012 5' Shoot grown under cold condition for 3days 570bp       BLT14.1protein[Hordeumvulgaresubsp.vulgare] 149 5.5395e-34
whv3_5031_a06f 2012 5' Shoot grown under cold condition for 3days 697bp       alphatubulin-2A[Triticumaestivum] 419 4.8496e-115
whv3_6031_a06f 2012 5' Shoot grown under cold condition for 3days 510bp       LOC100280744precursor[Zeamays] 120 2.61967e-25
whv3_8031_a06f 2012 5' Shoot grown under cold condition for 3days 713bp Contig6690       predictedprotein[Hordeumvulgaresubsp.vulgare] 416 4.25581e-114
whv3_10032_a07f 2012 5' Shoot grown under cold condition for 3days 556bp       PREDICTED:proline-,glutamicacid-andleucine-richprotein1-like[Brachypodiumdistachyon] 86 3.1501e-15
whv3_11032_a07f 2012 5' Shoot grown under cold condition for 3days 678bp       icerecrystallizationinhibitionprotein1precursor[Triticumaestivum] 326 5.17998e-87
whv3_13032_a07f 2012 5' Shoot grown under cold condition for 3days 567bp Contig8817       Chaint,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 214 1.84002e-53
whv3_14032_a07f 2012 5' Shoot grown under cold condition for 3days 612bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 2.0368e-94
whv3_15032_a07f 2012 5' Shoot grown under cold condition for 3days 659bp Contig6692       Os05g0143300[OryzasativaJaponicaGroup] 220 2.90688e-55
whv3_18032_a07f 2012 5' Shoot grown under cold condition for 3days 729bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 351 1.76539e-94
whv3_20032_a07f 2012 5' Shoot grown under cold condition for 3days 725bp Contig13473       glycinedecarboxylasePsubunit[xTritordeumsp.] 492 3.72089e-137
whv3_2032_a07f 2012 5' Shoot grown under cold condition for 3days 633bp       PREDICTED:elongationfactorG,chloroplastic-like[Brachypodiumdistachyon] 412 3.5633e-113
whv3_3032_a07f 2012 5' Shoot grown under cold condition for 3days 641bp Contig6719       cold-responsiveLEA/RAB-relatedCORprotein[Triticumaestivum] 317 1.62246e-84
whv3_4032_a07f 2012 5' Shoot grown under cold condition for 3days 553bp Contig6705       BLT14.1protein[Hordeumvulgaresubsp.vulgare] 131 1.11521e-28
whv3_7032_a07f 2012 5' Shoot grown under cold condition for 3days 602bp Contig14978       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.4242e-89
whv3_12032_a08f 2012 5' Shoot grown under cold condition for 3days 636bp Contig6535       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform1[Brachypodiumdistachyon] 375 4.89149e-102
whv3_15032_a08f 2012 5' Shoot grown under cold condition for 3days 721bp Contig7589       predictedprotein[Hordeumvulgaresubsp.vulgare] 451 1.21767e-124
whv3_16032_a08f 2012 5' Shoot grown under cold condition for 3days 664bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 1.69779e-34
whv3_17032_a08f 2012 5' Shoot grown under cold condition for 3days 685bp       PREDICTED:thiosulfatesulfurtransferase,chloroplastic-like[Brachypodiumdistachyon] 202 1.15349e-49
whv3_2032_a08f 2012 5' Shoot grown under cold condition for 3days 639bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whv3_4032_a08f 2012 5' Shoot grown under cold condition for 3days 350bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.55753e-14
whv3_8032_a08f 2012 5' Shoot grown under cold condition for 3days 547bp       PREDICTED:U6snRNA-associatedSm-likeproteinLSm7-like[Brachypodiumdistachyon] 193 1.75934e-47
whv3_9032_a08f 2012 5' Shoot grown under cold condition for 3days 594bp Contig26192       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 8.09756e-106
whv3_10047_a09f 2012 5' Shoot grown under cold condition for 3days 678bp Contig7644       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 8.51847e-98
whv3_14047_a09f 2012 5' Shoot grown under cold condition for 3days 662bp       WCOR719[Triticumaestivum] 277 1.55249e-72
whv3_18047_a09f 2012 5' Shoot grown under cold condition for 3days 618bp Contig6278       proline-richprotein[Triticumaestivum] 341 1.25333e-91
whv3_19047_a09f 2012 5' Shoot grown under cold condition for 3days 714bp Contig6693       predictedprotein[Hordeumvulgaresubsp.vulgare] 460 1.96775e-127
whv3_20047_a09f 2012 5' Shoot grown under cold condition for 3days 695bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 5.23553e-45
whv3_2047_a09f 2012 5' Shoot grown under cold condition for 3days 646bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.83377e-51
whv3_3047_a09f 2012 5' Shoot grown under cold condition for 3days 598bp Contig2373       RecName:Full=Beta-amylase;AltName:Full=1,4-alpha-D-glucanmaltohydrolase 398 7.94722e-109
whv3_4047_a09f 2012 5' Shoot grown under cold condition for 3days 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv3_7047_a09f 2012 5' Shoot grown under cold condition for 3days 634bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 1.35405e-112
whv3_8047_a09f 2012 5' Shoot grown under cold condition for 3days 582bp       BLT14.1protein[Hordeumvulgaresubsp.vulgare] 149 5.93518e-34
whv3_10047_a10f 2012 5' Shoot grown under cold condition for 3days 159bp       PREDICTED:HrTT-1-like[Cionaintestinalis] 35 8.51369
whv3_1047_a10f 2012 5' Shoot grown under cold condition for 3days 49bp Contig33954       PREDICTED:serine-threoninekinasereceptor-associatedprotein-like[Brachypodiumdistachyon] 36 1.75348
whv3_11047_a10f 2012 5' Shoot grown under cold condition for 3days 551bp Contig4316       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 6.80338e-55
whv3_17047_a10f 2012 5' Shoot grown under cold condition for 3days 708bp Contig10192       ribosomalproteinL3[Triticumaestivum] 470 1.46301e-130
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