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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 12027
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsl_1002_a01f 2012 5' Seed DPA30 67bp       PREDICTED:proteinbrittle-1,chloroplastic/amyloplastic-like[Brachypodiumdistachyon] 50 0.000224776
whsl_14002_a01f 2012 5' Seed DPA30 455bp Contig32411       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.58715e-33
whsl_2002_a01f 2012 5' Seed DPA30 59bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 38 0.584493
whsl_24001_a01f 2012 5' Seed DPA30 587bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 4.45438e-101
whsl_25001_a01f 2012 5' Seed DPA30 515bp Contig10163       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 8.71321e-93
whsl_26001_a01f 2012 5' Seed DPA30 215bp       cytosolicglutaminesynthetaseisoform[Triticumturgidumsubsp.durumxSecalecereale] 151 1.04148e-34
whsl_27002_a01f 2012 5' Seed DPA30 130bp            
whsl_28001_a01f 2012 5' Seed DPA30 480bp Contig11798       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 9.07673e-63
whsl_31001_a01f 2012 5' Seed DPA30 435bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 6.90804e-79
whsl_5002_a01f 2012 5' Seed DPA30 356bp       putativemixedbetaglucansynthase[Triticumaestivum] 78 8.69506e-13
whsl_23001_a01f 2012 5' Seed DPA30 294bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 5.63202e-44
whsl_8001_a01f 2012 5' Seed DPA30 582bp Contig12080       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 8.78706e-62
whsl_14001_a01r 2012 3' Seed DPA30 359bp Contig32411       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.58977e-33
whsl_19002_a01r 2012 3' Seed DPA30 32bp            
whsl_31001_a01r 2012 3' Seed DPA30 543bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.26098e-90
whsl_32002_a01r 2012 3' Seed DPA30 249bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 2.16912e-40
whsl_4001_a01r 2012 3' Seed DPA30 338bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 114 1.08225e-23
whsl_5001_a01r 2012 3' Seed DPA30 493bp Contig4732       putativemixedbetaglucansynthase[Triticumaestivum] 88 1.10075e-15
whsl_10001_a01r 2012 3' Seed DPA30 469bp Contig12182       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 7.56063e-49
whsl_11001_a01r 2012 3' Seed DPA30 483bp Contig10183       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 2.2978e-66
whsl_23001_a01r 2012 3' Seed DPA30 421bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 1.21474e-46
whsl_24001_a01r 2012 3' Seed DPA30 375bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 6.42493e-56
whsl_25002_a01r 2012 3' Seed DPA30 235bp Contig10163       putativeTdLFC69protein[Triticumdurum] 87 1.87461e-15
whsl_28002_a01r 2012 3' Seed DPA30 467bp Contig11798       PREDICTED:probablecalcium-bindingproteinCML13-like[Brachypodiumdistachyon] 227 1.52665e-57
whsl_8001_a01r 2012 3' Seed DPA30 126bp            
whsl_9001_a01r 2012 3' Seed DPA30 538bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 95 8.21431e-18
whsl_17018_a02f 2012 5' Seed DPA30 500bp Contig5903       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 2.07503e-83
whsl_13018_a02f 2012 5' Seed DPA30 444bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.74188e-61
whsl_14018_a02f 2012 5' Seed DPA30 706bp Contig10329       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 2.04462e-92
whsl_27018_a02f 2012 5' Seed DPA30 383bp Contig915       predictedprotein[Hordeumvulgaresubsp.vulgare] 192 5.38697e-47
whsl_28017_a02f 2012 5' Seed DPA30 533bp Contig5904       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.72947e-65
whsl_31017_a02f 2012 5' Seed DPA30 222bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 1.65305e-35
whsl_32017_a02f 2012 5' Seed DPA30 406bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 185 6.61602e-45
whsl_5018_a02f 2012 5' Seed DPA30 292bp       hypotheticalproteinPTT_08669[Pyrenophorateresf.teres0-1] 79 3.02508e-13
whsl_11017_a02f 2012 5' Seed DPA30 489bp       ChainA,TheCrystalStructureOfWheatNon-SpecificTransferProteinComplexedWithTwoMoleculesOfPhospholipidAt2.1AResolution 176 3.07341e-42
whsl_21018_a02f 2012 5' Seed DPA30 534bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.42257e-13
whsl_23017_a02f 2012 5' Seed DPA30 282bp       ChainA,TheCrystalStructureOfWheatNon-SpecificTransferProteinComplexedWithTwoMoleculesOfPhospholipidAt2.1AResolution 184 8.46942e-45
whsl_7017_a02f 2012 5' Seed DPA30 137bp Contig5332       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 1.16019e-17
whsl_29017_a02f 2012 5' Seed DPA30 388bp Contig5904       predictedprotein[Hordeumvulgaresubsp.vulgare] 196 2.83356e-48
whsl_14017_a02r 2012 3' Seed DPA30 483bp Contig10329       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 6.03284e-75
whsl_31017_a02r 2012 3' Seed DPA30 465bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 7.04237e-79
whsl_32018_a02r 2012 3' Seed DPA30 435bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 216 2.64338e-54
whsl_5017_a02r 2012 3' Seed DPA30 485bp       hypotheticalproteinPTT_08669[Pyrenophorateresf.teres0-1] 192 3.20211e-47
whsl_11017_a02r 2012 3' Seed DPA30 491bp       lipidtransferprotein1precursor[Triticumaestivum] 195 4.89541e-48
whsl_17018_a02r 2012 3' Seed DPA30 555bp Contig5903       predictedprotein[Hordeumvulgaresubsp.vulgare] 135 7.72306e-30
whsl_23017_a02r 2012 3' Seed DPA30 377bp       ChainA,TheCrystalStructureOfWheatNon-SpecificTransferProteinComplexedWithTwoMoleculesOfPhospholipidAt2.1AResolution 116 2.89939e-24
whsl_28018_a02r 2012 3' Seed DPA30 524bp Contig5904       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 9.85368e-47
whsl_29018_a02r 2012 3' Seed DPA30 94bp Contig5904       unknown[Zeamays] 38 0.755611
whsl_7017_a02r 2012 3' Seed DPA30 200bp Contig5332       PREDICTED:40SribosomalproteinS5-1-like[Brachypodiumdistachyon] 125 6.22194e-27
whsl_17034_a03f 2012 5' Seed DPA30 512bp       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 261 5.54846e-68
whsl_1034_a03f 2012 5' Seed DPA30 566bp Contig21675       PREDICTED:glycine-richRNA-bindingprotein2,mitochondrial-like[Brachypodiumdistachyon] 212 5.35363e-53
whsl_14034_a03f 2012 5' Seed DPA30 617bp Contig25852       vacuolarprocessingenzyme2[Aegilopsspeltoides] 409 2.86937e-112
whsl_15034_a03f 2012 5' Seed DPA30 520bp Contig5176       RecName:Full=Ubiquitin-40SribosomalproteinS27a;Contains:RecName:Full=Ubiquitin;Contains:RecName:Full=40SribosomalproteinS27a;Flags:Precursor 312 3.75875e-83
whsl_19033_a03f 2012 5' Seed DPA30 419bp Contig3250       expansinprotein[Triticumaestivum] 86 3.24e-15
whsl_20034_a03f 2012 5' Seed DPA30 476bp Contig3250       expansinprotein[Triticumaestivum] 131 1.12494e-28
whsl_2034_a03f 2012 5' Seed DPA30 264bp       PREDICTED:uncharacterizedproteinLOC100844536[Brachypodiumdistachyon] 48 0.000971106
whsl_25033_a03f 2012 5' Seed DPA30 38bp            
whsl_27034_a03f 2012 5' Seed DPA30 363bp Contig5924       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 3.47293e-30
whsl_28033_a03f 2012 5' Seed DPA30 507bp       GlydMald3-likeprotein[Glycyphagusdomesticus] 238 6.63114e-61
whsl_30033_a03f 2012 5' Seed DPA30 587bp Contig5905       elongationfactor1-alpha[Deschampsiaantarctica] 333 1.7557e-89
whsl_3034_a03f 2012 5' Seed DPA30 47bp            
whsl_31033_a03f 2012 5' Seed DPA30 52bp Contig1973       unknown[Medicagotruncatula] 40 0.179741
whsl_4034_a03f 2012 5' Seed DPA30 479bp Contig1979       cyclophilin3[Dasypyrumvillosum] 308 3.91898e-82
whsl_5034_a03f 2012 5' Seed DPA30 478bp       unknown[Zeamays] 299 2.37756e-79
whsl_6033_a03f 2012 5' Seed DPA30 535bp Contig3542       hypotheticalproteinZeamMp158[Zeamayssubsp.mays] 52 1.6236e-13
whsl_21034_a03f 2012 5' Seed DPA30 427bp Contig8996       PREDICTED:phospholipaseA-2-activatingprotein-like[Brachypodiumdistachyon] 83 2.0826e-14
whsl_22033_a03f 2012 5' Seed DPA30 371bp       plamamembraneprotein[Triticumaestivum] 207 1.25886e-51
whsl_23033_a03f 2012 5' Seed DPA30 314bp Contig17083       hypotheticalproteinOsI_08713[OryzasativaIndicaGroup] 153 2.7308e-35
whsl_7033_a03f 2012 5' Seed DPA30 127bp            
whsl_9033_a03f 2012 5' Seed DPA30 506bp Contig1156       wali6[Triticumaestivum] 127 1.26223e-27
whsl_14033_a03r 2012 3' Seed DPA30 536bp Contig25852       vacuolarprocessingenzyme2[Aegilopsspeltoides] 234 1.10939e-59
whsl_15033_a03r 2012 3' Seed DPA30 569bp Contig5176       RecName:Full=Ubiquitin-40SribosomalproteinS27a;Contains:RecName:Full=Ubiquitin;Contains:RecName:Full=40SribosomalproteinS27a;Flags:Precursor 317 1.53597e-84
whsl_19034_a03r 2012 3' Seed DPA30 412bp Contig3250       expansinprotein[Triticumaestivum] 133 2.25636e-29
whsl_2033_a03r 2012 3' Seed DPA30 338bp       PREDICTED:uncharacterizedproteinLOC100844536[Brachypodiumdistachyon] 94 1.15897e-17
whsl_30033_a03r 2012 3' Seed DPA30 495bp       elongationfactor-1alpha,partial[Triticumaestivum] 183 1.46723e-44
whsl_3034_a03r 2012 3' Seed DPA30 324bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 1.59249e-22
whsl_4033_a03r 2012 3' Seed DPA30 560bp Contig1979       cyclophilinA-1[Triticumaestivum] 236 2.55615e-60
whsl_5033_a03r 2012 3' Seed DPA30 572bp Contig5906       hypotheticalproteinOsI_15702[OryzasativaIndicaGroup] 225 6.19078e-57
whsl_6033_a03r 2012 3' Seed DPA30 505bp       hypotheticalproteinPTT_08160[Pyrenophorateresf.teres0-1] 202 3.08744e-50
whsl_17034_a03r 2012 3' Seed DPA30 496bp       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 215 4.55047e-54
whsl_20033_a03r 2012 3' Seed DPA30 463bp       expansinprotein[Triticumaestivum] 144 1.27277e-32
whsl_21033_a03r 2012 3' Seed DPA30 36bp            
whsl_22033_a03r 2012 3' Seed DPA30 529bp       plamamembraneprotein[Triticumaestivum] 129 4.70543e-28
whsl_23033_a03r 2012 3' Seed DPA30 535bp Contig17083       ATP/ADPcarrierprotein[Triticumturgidum] 195 4.37269e-48
whsl_28034_a03r 2012 3' Seed DPA30 502bp       GlydMald3-likeprotein[Glycyphagusdomesticus] 198 5.70351e-49
whsl_7033_a03r 2012 3' Seed DPA30 36bp            
whsl_9033_a03r 2012 3' Seed DPA30 545bp Contig1156       wali6[Triticumaestivum] 125 5.76631e-27
whsl_17050_a04f 2012 5' Seed DPA30 464bp Contig23617       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 9.89325e-73
whsl_12050_a04f 2012 5' Seed DPA30 443bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 260 9.57699e-68
whsl_13050_a04f 2012 5' Seed DPA30 449bp Contig5907       unnamedproteinproduct[HaliscomenobacterhydrossisDSM1100] 35 6.48798
whsl_15050_a04f 2012 5' Seed DPA30 577bp Contig5332       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 2.70725e-92
whsl_19049_a04f 2012 5' Seed DPA30 32bp            
whsl_20050_a04f 2012 5' Seed DPA30 597bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 65 9.34941e-09
whsl_2050_a04f 2012 5' Seed DPA30 541bp Contig18014       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 347 9.37423e-94
whsl_24049_a04f 2012 5' Seed DPA30 591bp Contig10804       hypotheticalproteinBamMEX5DRAFT_3615[BurkholderiaambifariaMEX-5] 53 4.65397e-05
whsl_25049_a04f 2012 5' Seed DPA30 525bp Contig10732       PREDICTED:actin-7-like[Brachypodiumdistachyon] 338 6.51814e-91
whsl_27050_a04f 2012 5' Seed DPA30 483bp Contig22704       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.78574e-67
whsl_28049_a04f 2012 5' Seed DPA30 215bp Contig22704       predictedprotein[Hordeumvulgaresubsp.vulgare] 145 4.37565e-33
whsl_30049_a04f 2012 5' Seed DPA30 556bp Contig3421       Chaini,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 236 2.50882e-60
whsl_31049_a04f 2012 5' Seed DPA30 500bp       LOC100280744precursor[Zeamays] 114 1.41463e-23
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