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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4293
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whkv_10015_a01f 2012 5' Shoot grown with continuous light after cold treatment 398bp Contig6263       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 9.26454e-63
whkv_11015_a01f 2012 5' Shoot grown with continuous light after cold treatment 703bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 420 2.19956e-115
whkv_13015_a01f 2012 5' Shoot grown with continuous light after cold treatment 660bp       PREDICTED:uncharacterizedproteinLOC100843647[Brachypodiumdistachyon] 97 3.71149e-18
whkv_14015_a01f 2012 5' Shoot grown with continuous light after cold treatment 441bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.52545e-73
whkv_15015_a01f 2012 5' Shoot grown with continuous light after cold treatment 701bp       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Hordeumchilense] 465 7.78695e-129
whkv_16015_a01f 2012 5' Shoot grown with continuous light after cold treatment 680bp       hexaubiquitinprotein[Arabidopsislyratasubsp.lyrata] 269 4.455e-70
whkv_20015_a01f 2012 5' Shoot grown with continuous light after cold treatment 549bp Contig4170       S-adenosyl-L-homocysteinehydrolase[Hordeumvulgaresubsp.vulgare] 204 1.30173e-50
whkv_2015_a01f 2012 5' Shoot grown with continuous light after cold treatment 606bp       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 120 2.54981e-25
whkv_5015_a01f 2012 5' Shoot grown with continuous light after cold treatment 695bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 1.19307e-81
whkv_9015_a01f 2012 5' Shoot grown with continuous light after cold treatment 326bp Contig2743       RecName:Full=Phosphoribulokinase,chloroplastic;Short=PRK;Short=PRKase;AltName:Full=Phosphopentokinase;Flags:Precursor 226 1.98384e-57
whkv_1015_a02f 2012 5' Shoot grown with continuous light after cold treatment 483bp Contig6630       chlorophyllideaoxygenase[Hordeumvulgare] 103 4.77024e-21
whkv_14015_a02f 2012 5' Shoot grown with continuous light after cold treatment 193bp Contig20696       profilinR2-2[Triticumturgidumsubsp.durumxSecalecereale] 76 3.33624e-12
whkv_15015_a02f 2012 5' Shoot grown with continuous light after cold treatment 251bp       ribulosebiphosphatecarboxylase,partial[Setariaparviflora] 167 1.07281e-39
whkv_17015_a02f 2012 5' Shoot grown with continuous light after cold treatment 655bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 442 3.51551e-122
whkv_18015_a02f 2012 5' Shoot grown with continuous light after cold treatment 690bp Contig2875       chlorophylla/b-bindingproteinWCABprecursor[Triticumaestivum] 460 1.408e-127
whkv_19015_a02f 2012 5' Shoot grown with continuous light after cold treatment 757bp Contig11714       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 9.44661e-33
whkv_20015_a02f 2012 5' Shoot grown with continuous light after cold treatment 782bp            
whkv_4015_a02f 2012 5' Shoot grown with continuous light after cold treatment 735bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.53561e-98
whkv_5015_a02f 2012 5' Shoot grown with continuous light after cold treatment 672bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.05578e-88
whkv_6015_a02f 2012 5' Shoot grown with continuous light after cold treatment 708bp Contig7144       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 1.91963e-114
whkv_7015_a02f 2012 5' Shoot grown with continuous light after cold treatment 691bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 452 3.87557e-125
whkv_1016_a03f 2012 5' Shoot grown with continuous light after cold treatment 318bp Contig12167       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 1.55397e-17
whkv_16016_a03f 2012 5' Shoot grown with continuous light after cold treatment 765bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 482 4.31079e-134
whkv_2016_a03f 2012 5' Shoot grown with continuous light after cold treatment 519bp Contig16363       PREDICTED:uncharacterizedproteinLOC100827890[Brachypodiumdistachyon] 317 1.16295e-84
whkv_3016_a03f 2012 5' Shoot grown with continuous light after cold treatment 591bp Contig12684       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 1.71598e-108
whkv_4016_a03f 2012 5' Shoot grown with continuous light after cold treatment 678bp Contig6790       predictedprotein[Hordeumvulgaresubsp.vulgare] 431 1.14332e-118
whkv_7016_a03f 2012 5' Shoot grown with continuous light after cold treatment 333bp Contig25765            
whkv_9016_a03f 2012 5' Shoot grown with continuous light after cold treatment 465bp Contig8323       PREDICTED:abscisicstress-ripeningprotein3-like[Brachypodiumdistachyon] 207 9.5845e-52
whkv_10016_a04f 2012 5' Shoot grown with continuous light after cold treatment 137bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 82 5.95855e-14
whkv_1016_a04f 2012 5' Shoot grown with continuous light after cold treatment 203bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 56 2.70881e-06
whkv_11016_a04f 2012 5' Shoot grown with continuous light after cold treatment 670bp       Os06g0582600[OryzasativaJaponicaGroup] 240 2.79787e-61
whkv_12016_a04f 2012 5' Shoot grown with continuous light after cold treatment 742bp Contig11419       PREDICTED:pollen-specificproteinSF3-like[Brachypodiumdistachyon] 385 1.15575e-104
whkv_13016_a04f 2012 5' Shoot grown with continuous light after cold treatment 646bp Contig35094       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic;Short=RuBisCOsmallsubunitPWS4.3;Flags:Precursor 357 1.89512e-96
whkv_16016_a04f 2012 5' Shoot grown with continuous light after cold treatment 471bp Contig7591       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 329 2.17444e-88
whkv_18016_a04f 2012 5' Shoot grown with continuous light after cold treatment 289bp Contig4366       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 1.65051e-43
whkv_19016_a04f 2012 5' Shoot grown with continuous light after cold treatment 695bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whkv_20016_a04f 2012 5' Shoot grown with continuous light after cold treatment 600bp Contig614       Chainv,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 218 8.58873e-55
whkv_2016_a04f 2012 5' Shoot grown with continuous light after cold treatment 652bp Contig14088       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 417 2.04058e-114
whkv_3016_a04f 2012 5' Shoot grown with continuous light after cold treatment 667bp Contig9007       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 1.46673e-118
whkv_4016_a04f 2012 5' Shoot grown with continuous light after cold treatment 733bp Contig9953       vacuolarproton-ATPasesubunitA[Triticumaestivum] 437 1.46149e-120
whkv_8016_a04f 2012 5' Shoot grown with continuous light after cold treatment 779bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whkv_9016_a04f 2012 5' Shoot grown with continuous light after cold treatment 160bp       hypotheticalprotein[OryzasativaJaponicaGroup] 51 0.000114799
whkv_13031_a05f 2012 5' Shoot grown with continuous light after cold treatment 663bp Contig2266       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.46712e-86
whkv_14031_a05f 2012 5' Shoot grown with continuous light after cold treatment 681bp Contig8529       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 2.78891e-112
whkv_15031_a05f 2012 5' Shoot grown with continuous light after cold treatment 502bp Contig4599       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 2.27829e-90
whkv_16031_a05f 2012 5' Shoot grown with continuous light after cold treatment 697bp Contig2805       MYB-relatedprotein[Aegilopsspeltoides] 440 2.6549e-121
whkv_20031_a05f 2012 5' Shoot grown with continuous light after cold treatment 698bp Contig23556       hypotheticalproteinOsI_20483[OryzasativaIndicaGroup] 242 6.22072e-62
whkv_2031_a05f 2012 5' Shoot grown with continuous light after cold treatment 383bp Contig7644       RecName:Full=RibulosebisphosphatecarboxylasesmallchainPW9,chloroplastic;Short=RuBisCOsmallsubunitPW9;Flags:Precursor 181 9.5089e-44
whkv_4031_a05f 2012 5' Shoot grown with continuous light after cold treatment 364bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 2.32411e-34
whkv_6031_a05f 2012 5' Shoot grown with continuous light after cold treatment 742bp       conservedhypotheticalprotein[NeosporacaninumLiverpool] 47 0.00334896
whkv_7031_a05f 2012 5' Shoot grown with continuous light after cold treatment 700bp Contig7104       predictedprotein[Hordeumvulgaresubsp.vulgare] 486 2.49917e-135
whkv_8031_a05f 2012 5' Shoot grown with continuous light after cold treatment 761bp Contig34840       predictedprotein[Hordeumvulgaresubsp.vulgare] 445 9.92416e-123
whkv_9031_a05f 2012 5' Shoot grown with continuous light after cold treatment 705bp       PREDICTED:intron-bindingproteinaquarius[Brachypodiumdistachyon] 396 4.53385e-108
whkv_1031_a06f 2012 5' Shoot grown with continuous light after cold treatment 621bp       PREDICTED:ADP-ribosylationfactorGTPase-activatingproteinAGD2-like[Brachypodiumdistachyon] 331 1.31526e-88
whkv_12031_a06f 2012 5' Shoot grown with continuous light after cold treatment 759bp Contig13951       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 366 4.48586e-99
whkv_13031_a06f 2012 5' Shoot grown with continuous light after cold treatment 682bp Contig1956       alpha-tubulin[Alopecurusaequalis] 364 1.75498e-98
whkv_18031_a06f 2012 5' Shoot grown with continuous light after cold treatment 676bp Contig9262       predictedprotein[Hordeumvulgaresubsp.vulgare] 457 1.12786e-126
whkv_19031_a06f 2012 5' Shoot grown with continuous light after cold treatment 602bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 387 1.08543e-105
whkv_20031_a06f 2012 5' Shoot grown with continuous light after cold treatment 700bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whkv_2031_a06f 2012 5' Shoot grown with continuous light after cold treatment 668bp Contig14533       beta-tubulin[Loliumtemulentum] 456 3.25996e-126
whkv_3031_a06f 2012 5' Shoot grown with continuous light after cold treatment 648bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 422 4.79696e-116
whkv_7031_a06f 2012 5' Shoot grown with continuous light after cold treatment 721bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 3.59425e-108
whkv_8031_a06f 2012 5' Shoot grown with continuous light after cold treatment 763bp Contig18716       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 359 4.19864e-97
whkv_9031_a06f 2012 5' Shoot grown with continuous light after cold treatment 725bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.47341e-109
whkv_1032_a07f 2012 5' Shoot grown with continuous light after cold treatment 570bp       PREDICTED:potassiumtransporter5-likeisoform2[Brachypodiumdistachyon] 343 1.53241e-92
whkv_12032_a07f 2012 5' Shoot grown with continuous light after cold treatment 219bp Contig6604       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 9.73798e-25
whkv_15032_a07f 2012 5' Shoot grown with continuous light after cold treatment 648bp Contig14586       bluecopperprotein[Triticumaestivum] 333 2.27188e-89
whkv_18032_a07f 2012 5' Shoot grown with continuous light after cold treatment 643bp Contig2806       PREDICTED:uncharacterizedproteinLOC763087[Strongylocentrotuspurpuratus] 48 0.00183592
whkv_19032_a07f 2012 5' Shoot grown with continuous light after cold treatment 763bp Contig15820       predictedprotein[Hordeumvulgaresubsp.vulgare] 431 1.48297e-118
whkv_20032_a07f 2012 5' Shoot grown with continuous light after cold treatment 567bp Contig2925       PREDICTED:uncharacterizedproteinLOC100841437isoform1[Brachypodiumdistachyon] 166 3.36889e-39
whkv_2032_a07f 2012 5' Shoot grown with continuous light after cold treatment 662bp Contig8710       PREDICTED:40SribosomalproteinS17-2-like[Brachypodiumdistachyon] 260 1.96391e-67
whkv_3032_a07f 2012 5' Shoot grown with continuous light after cold treatment 540bp Contig10703       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 1.11249e-78
whkv_7032_a07f 2012 5' Shoot grown with continuous light after cold treatment 723bp       superoxidedismutase[Triticumaestivum] 314 1.79626e-83
whkv_9032_a07f 2012 5' Shoot grown with continuous light after cold treatment 236bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 99 4.76712e-19
whkv_1032_a08f 2012 5' Shoot grown with continuous light after cold treatment 613bp Contig2648       proteindisulfideisomerase1proprotein[Triticumaestivum] 409 2.78855e-112
whkv_11032_a08f 2012 5' Shoot grown with continuous light after cold treatment 53bp            
whkv_12032_a08f 2012 5' Shoot grown with continuous light after cold treatment 689bp Contig2173       predictedprotein[Hordeumvulgaresubsp.vulgare] 467 1.15181e-129
whkv_17032_a08f 2012 5' Shoot grown with continuous light after cold treatment 688bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.76967e-97
whkv_19032_a08f 2012 5' Shoot grown with continuous light after cold treatment 665bp Contig7391       protongradientregulation5[Triticumaestivum] 243 3.28283e-62
whkv_5032_a08f 2012 5' Shoot grown with continuous light after cold treatment 727bp Contig22809       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 1.07851e-67
whkv_7032_a08f 2012 5' Shoot grown with continuous light after cold treatment 612bp       RecName:Full=HistoneH2B.3;AltName:Full=wcH2B-8 265 6.59789e-69
whkv_1047_a09f 2012 5' Shoot grown with continuous light after cold treatment 547bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 9.85206e-91
whkv_12047_a09f 2012 5' Shoot grown with continuous light after cold treatment 761bp Contig7002       PREDICTED:probableglutathioneperoxidase4-like[Brachypodiumdistachyon] 336 3.80632e-90
whkv_16047_a09f 2012 5' Shoot grown with continuous light after cold treatment 705bp Contig5978       S-adenosylmethioninedecarboxylase[Triticumaestivum] 376 3.71753e-102
whkv_17047_a09f 2012 5' Shoot grown with continuous light after cold treatment 768bp Contig6108       PREDICTED:uncharacterizedproteinLOC100840651[Brachypodiumdistachyon] 353 3.94443e-95
whkv_19047_a09f 2012 5' Shoot grown with continuous light after cold treatment 596bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.86212e-49
whkv_20047_a09f 2012 5' Shoot grown with continuous light after cold treatment 771bp Contig2808       PREDICTED:plasmamembraneATPase-likeisoform2[Brachypodiumdistachyon] 497 1.30601e-138
whkv_2047_a09f 2012 5' Shoot grown with continuous light after cold treatment 704bp Contig2809       predictedprotein[Hordeumvulgaresubsp.vulgare] 456 3.65447e-126
whkv_4047_a09f 2012 5' Shoot grown with continuous light after cold treatment 719bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 133 5.62014e-29
whkv_5047_a09f 2012 5' Shoot grown with continuous light after cold treatment 689bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 4.40745e-105
whkv_10047_a10f 2012 5' Shoot grown with continuous light after cold treatment 690bp Contig9221       cytosolicmalatedehydrogenase[Triticumaestivum] 452 6.54039e-125
whkv_12047_a10f 2012 5' Shoot grown with continuous light after cold treatment 663bp Contig14131       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 6.67204e-108
whkv_13047_a10f 2012 5' Shoot grown with continuous light after cold treatment 696bp Contig36412       biostress-resistance-relatedprotein[Triticumaestivum] 442 4.05325e-122
whkv_14047_a10f 2012 5' Shoot grown with continuous light after cold treatment 682bp Contig6445       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 454 1.2895e-125
whkv_17047_a10f 2012 5' Shoot grown with continuous light after cold treatment 724bp Contig21192       PREDICTED:abscisicstress-ripeningprotein3-like[Brachypodiumdistachyon] 226 6.43335e-57
whkv_18047_a10f 2012 5' Shoot grown with continuous light after cold treatment 269bp Contig21192       hypotheticalproteinNEUTE1DRAFT_58827[NeurosporatetraspermaFGSC2508] 36 3.79204
whkv_19047_a10f 2012 5' Shoot grown with continuous light after cold treatment 109bp       PREDICTED:uncharacterizedproteinLOC100838974[Brachypodiumdistachyon] 73 3.72655e-11
whkv_20047_a10f 2012 5' Shoot grown with continuous light after cold treatment 732bp Contig29284       S-adenosylmethioninedecarboxylaseprecursor[Triticumaestivum] 497 1.17892e-138
whkv_3047_a10f 2012 5' Shoot grown with continuous light after cold treatment 722bp       unknown[Triticumturgidum] 47 0.00534895
whkv_4047_a10f 2012 5' Shoot grown with continuous light after cold treatment 749bp Contig20622       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 3.14013e-57
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